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R Code RPB Abundance Over Time

R code RPB abundance over time

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Arghya Paul
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9 views1 page

R Code RPB Abundance Over Time

R code RPB abundance over time

Uploaded by

Arghya Paul
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as TXT, PDF, TXT or read online on Scribd
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# Ensure ggplot2 is installed and loaded

if (!requireNamespace("ggplot2", quietly = TRUE)) {


install.packages("ggplot2")
}
library(ggplot2)

# Ensure grid is loaded


library(grid)

# Load the data


data <- read.csv("E:\\RPB ADundance season.csv")

# Clean and prepare the data


data$Days_after_transplanting <- as.numeric(gsub("d", "",
data$Days.after.transplanting))
data$Number_of_red_pumpkin_beetle <- as.numeric(data$Number.of.red.pumpkin.beetle)

# Calculate the 5% standard error


data$Standard_error <- data$Number_of_red_pumpkin_beetle * 0.05

# Create the plot


p <- ggplot(data, aes(x = Days_after_transplanting, y =
Number_of_red_pumpkin_beetle)) +
geom_line(color = "cyan4", size = 1) +
geom_point(shape = 17, color = "darkolivegreen4", size = 4) + # shape 17 is for
triangles
geom_errorbar(aes(ymin = Number_of_red_pumpkin_beetle - Standard_error, ymax =
Number_of_red_pumpkin_beetle + Standard_error),
width = 0.2, color = "lightcoral") +
labs(title = "Red Pumpkin Beetle Abundance Over Time",
x = "Days After Transplanting",
y = "Number of Red Pumpkin Beetle") +
theme_minimal(base_size = 11) +
theme(plot.title = element_text(hjust = 0.5, face = "bold", size = 12),
axis.title = element_text(face = "bold", size = 10),
panel.grid.major = element_line(size = 0.5, linetype = 'dashed', colour =
"grey"),
panel.grid.minor = element_line(size = 0.25, linetype = 'dashed', colour =
"grey"))

# Function to draw a rounded rectangle background


draw_rounded_rect <- function() {
grid.roundrect(gp = gpar(fill = "white", col = "grey"), r = unit(0.1, "snpc"))
}

# Draw the plot with rounded rectangle background


grid.newpage()
pushViewport(viewport())
draw_rounded_rect()
print(p, newpage = FALSE)
popViewport()

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