Stevens Hydra Manual
Stevens Hydra Manual
Soil Sensor
Users Manual
January 2018
WARNING!
BATTERIES ARE DANGEROUS. IF HANDLED IMPROPERLY, THEY CAN RESULT IN DEATH, PERSONAL INJURY OR CAN CAUSE DAMAGE TO
EQUIPMENT. Batteries can be hazardous when misused, mishandled, or disposed of improperly. Batteries contain potential energy, even when partially discharged.
WARNING!
ELECTRICAL SHOCK CAN RESULT IN DEATH OR PERSONAL INJURY. Use extreme caution when handling cables, connectors, or terminals; they may yield
hazardous currents if inadvertently brought into contact with conductive materials, including water and the human body.
CAUTION!
Be aware of protective measures against environmentally caused electric current surges and follow the previous warnings and cautions, the following safety activities
should be carefully observed.
Heat, Fire
NEVER dispose of batteries in fire or locate them in excessively heated spaces. Observe the temperature limit listed in the instrument specifications.
Charging
NEVER charge "dry" cells or lithium batteries that are not designed to be charged.
NEVER charge rechargeable batteries at currents higher than recommended ratings.
NEVER recharge a frozen battery. Thaw it completely at room temperature before connecting charger.
Unvented Container
NEVER store or charge batteries in a gas-tight container. Doing so may lead to pressure buildup and explosive concentrations of hydrogen.
Short Circuits
NEVER short circuit batteries. High current flow may cause internal battery heating and/or explosion.
Damaged Batteries
Personal injury may result from contact with hazardous materials from a damaged or open battery. NEVER attempt to open a battery enclosure. Wear appropriate
protective clothing, and handle damaged batteries carefully.
Disposal
ALWAYS dispose of batteries in a responsible manner. Observe all applicable federal, state, and local regulations for disposal of the specific type of battery involved.
NOTICE
Stevens makes no claims as to the immunity of its equipment against lightning strikes, either direct or nearby.
WARNING
This equipment generates, uses, and can radiate radio frequency energy and, if not installed in accordance with the instructions manual, may cause interference to radio
communications. It has been tested and found to comply with the limits for a Class A computing device pursuant to Subpart J of Part 15 of FCC Rules, which are designed
to provide reasonable protection against such interference when operated in a commercial environment. Operation of this equipment in a residential area is likely to cause
interference in which case the user at their own expense will be required to take whatever measures may be required to correct the interference.
USER INFORMATION
Stevens makes no warranty as to the information furnished in these instructions and the reader assumes all risk in the use thereof. No liability is assumed for damages
resulting from the use of these instructions. We reserve the right to make changes to products and/or publications without prior notice.
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Preface
This manual is a comprehensive guide to the Stevens HydraProbe Soil Sensor. Contained within this manual is
a theoretical discussion of soil physics that explains the theory behind how electromagnetic soil sensors work as
well as a discussion about vadose zone hydrology. References to peer reviewed scientific publications are
provided to give the user further background on these topics. Because soil moisture monitoring is becoming
increasingly important to researchers across a broad number of fields including hydrology, agronomy, soil
physics, and geotechnical engineering, we feel it is necessary to include advanced theoretical discussions with
references to help the scientists and engineers understand the measurement technology in a manner that is
unbiased and referenced.
Easy to Use
Despite this sophistication, Stevens HydraProbe Soil Sensor is also very easy to use. The user may skip to
chapter 3 to learn about the installation and reference Appendix A for SDI-12 probes and Appendix B for
RS485 Probes for wiring and communication. Calibration is not necessary for most soils and the default settings
will accommodate most users and applications.
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Comprehensive Stevens HydraProbe User's Manual
Table of Contents
1 Introduction 6
1.1 Applications................................................................................................................................. 7
1.2 Calibrations ................................................................................................................................. 7
1.3 Dielectric Permittivity ................................................................................................................. 7
1.4 Structural Components ................................................................................................................ 7
1.5 Accuracy and Precision ............................................................................................................... 8
1.6 Electromagnetic Compatibility.................................................................................................... 8
1.7 Configurations and Physical Specification.................................................................................. 8
1.8 Soil Data Accessories and other Products ................................................................................... 9
2 Installation 12
2.1 Precautions ................................................................................................................................ 12
2.2 Topographical Station Placement Considerations ..................................................................... 12
2.3 Soil Sensor Depth Selection ...................................................................................................... 14
2.4 Installation of the HydraProbe into the Soil .............................................................................. 16
2.4.1 Checklist before you go into the field .............................................................................. 16
2.4.2 Test the Probes and logger in the Office before going into the Field .............................. 16
2.4.3 Labeling ........................................................................................................................... 16
2.4.4 Installing the HydraProbe in the Soil ............................................................................... 16
2.4.5 Soil Sensor Orientation .................................................................................................... 17
2.5 Wiring to a Logger Station ........................................................................................................ 17
2.5.1 Sensor Setup..................................................................................................................... 18
2.6 Backfilling the Hole .................................................................................................................. 18
2.6.1 Test Before you Backfill .................................................................................................. 18
2.6.2 Backfilling Precautions .................................................................................................... 19
2.7 Lightning ................................................................................................................................... 20
3 Trouble Shooting and Soil Considerations 22
3.1 Trouble shooting at the Logger end and Out of the ground ...................................................... 22
3.1.1 Check Wiring and Power ................................................................................................. 22
3.1.2 Communicate with the Sensor at the Logger End............................................................ 22
3.1.3 Check the Logger Configuration ..................................................................................... 23
3.1.4 Remove the Suspect Probe from the Soil ........................................................................ 23
3.2 Soil Hydrology .......................................................................................................................... 24
3.2.1 Evapotranspiration ........................................................................................................... 24
3.2.2 Hydrology and Soil Texture............................................................................................. 25
3.2.3 Soil Bulk Density ............................................................................................................. 25
3.2.4 Shrink/Swell Clays........................................................................................................... 25
3.2.5 Rock and Pebbles ............................................................................................................. 26
3.2.6 Bioturbation ..................................................................................................................... 26
3.2.7 Salt Affected Soil and the Loss Tangent.......................................................................... 26
3.2.8 Ped Wetting ...................................................................................................................... 27
3.2.9 Frozen Soil ....................................................................................................................... 27
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4 Theory of Operation, Dielectric Permittivity and Soil Physics. 28
4.1 Introduction ............................................................................................................................... 28
4.2 Soil Matric Potential .................................................................................................................. 28
4.3 Electromagnetic Soil Water Methods and Soil Physics ............................................................ 30
4.3.1 Dielectric Theory ............................................................................................................. 30
4.3.2 Temperature ..................................................................................................................... 32
4.3.3 Temperature and the Real Permittivity ............................................................................ 32
4.3.4 Temperature and the imaginary permittivity ................................................................... 33
4.4 Types of Commercial Electromagnetic Soil Sensors ................................................................ 33
4.4.1 The HydraProbe, a Ratiometric Coaxial Impedance Dielectric Reflectometer ............... 34
4.4.2 Advantages of using the real dielectric permittivity over the apparent permittivity ....... 34
4.4.3 The HydraProbe is Easy to Use ....................................................................................... 34
5 Measurements, Parameters, and Data Interpretation 35
5.1 Soil Moisture ............................................................................................................................. 35
5.1.1 Soil Moisture Units .......................................................................................................... 35
5.2 Soil Moisture Measurement Considerations for Irrigation........................................................ 35
5.2.1 Fill Point Irrigation Scheduling ....................................................................................... 35
5.2.2 Mass Balance Irrigation Scheduling ................................................................................ 36
5.2.3 Soil Moisture Calibrations ............................................................................................... 41
5.2.3.1 Other Factory Calibration ....................................................................................... 41
5.3 Soil Salinity and the HydraProbe EC Parameters ..................................................................... 41
5.3.1 Soil Salinity ...................................................................................................................... 42
5.3.2 Bulk EC versus Pore Water EC ....................................................................................... 42
5.3.3 Bulk EC and EC Pathways in Soil ................................................................................... 43
5.3.4 Application of Bulk EC Measurements ........................................................................... 44
5.3.5 Total Dissolved Solids (TDS) .......................................................................................... 44
A. Appendix – HydraProbe Basic SDI-12 Communication (2.9 and 3.0 Firmware)1 46
A.2 Advanced SDI-12 Communication 47
B. Appendix - RS-485 Communication 51
C. Appendix – Custom Calibration Programming 56
D. Appendix - Useful links 61
E. Appendix - References 62
F. Appendix – CE Compliance 63
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1 Introduction
The Stevens HydraProbe Soil Sensor measures soil temperature, soil moisture, soil electrical conductivity and the
complex dielectric permittivity. Designed for many years of service buried in soil, the HydraProbe uses quality
material in its construction. Marine grade stainless steel, ABS housing and a high grade epoxy potting protects
the internal electrical component from the corrosive and the reactive properties of soil. Most of the HydraProbes
installed more than a decade ago are still in service today.
The HydraProbe is not only a practical measurement device; it is also a scientific instrument. Trusted by farmers
to maximize crop yields, using HydraProbes in an irrigation system can prevent runoff that may be harmful to
aquatic habitats, conserve water where it is scarce, and save money on pumping costs. Researchers can rely on
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the HydraProbe to provide accurate and precise data for many years of service. The inter-sensor variability is very
low, allowing direct comparison of data from multiple probes in a soil column or in a watershed.
The HydraProbe bases its measurements on the physics and behavior of a reflected electromagnetic radio wave
in soil to determine the dielectric permittivity. From the complex dielectric permittivity, the HydraProbe can
simultaneously measure soil moisture and electrical conductivity. The complex dielectric permittivity is related
to the electrical capacitance and electrical conductivity. The HydraProbe uses patented algorithms to convert the
signal response of the standing radio wave into the dielectric permittivity and thus the soil moisture and soil
electrical conductivity.
1.1 Applications
The US Department of Agriculture Soil Climate Analysis Network (SCAN) has depended on the HydraProbe in
hundreds of stations around the United States and Antarctica since the early 1990s. The Bureau of Reclamation's
Agrimet Network, NOAA, and other mesonets and research watersheds around the world trust the measurements
the HydraProbe provides. Some of the applications include:
Agriculture Irrigation
Viticulture Sports Turf
Research Soil Phytoremediation
Water Shed Modeling Evapotranspiration Studies
Land Reclamation Land Slide Studies
Shrink/Swell Clays Flood Forecasting
Satellite Ground Truthing Wetland Delineation
Predicting Weather Precision Agriculture
1.2 Calibrations
The HydraProbe has three factory calibrations that provide excellent performance in a variety of soils regardless
of texture or organics. The three calibrations are GENERAL good for most all soils composed of sand, silt, and
clay, organic (O) and rockwool (R). The factory GENERL soil calibration is the default calibration and is suitable
for most all mineral soils. (See Chapter 6.1.3 and Appendix C for more information)
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permanently potted with a rock-hard epoxy resin giving the probes a rugged construction. The cable has a direct
burial casing and contains the power, ground, and data wires that are all soldered to the internal electronics.
Parameter Accuracy/Precision
Temperature (C) +/- 0.3 Degrees Celsius(From -30o to 60oC)
Soil Moisture wfv † (m3 m-3) +/- 0.01 to 0.03 wfv (m3 m-3) Accuracy
(Typical depends on soil)
Soil Moisture wfv † (m3 m-3) +/- 0.001 wfv (m3 m-3) Precision
Electrical Conductivity † (S/m) TUC* +/- 0.0014 S/m or +/- 1% (Typical)
Electrical Conductivity † (S/m) TC** +/- 0.0014 S/m or +/- 5% (Typical)
Real/Imaginary Dielectric Constant +/- 0.1 to 0.2 or +/- 1% FS
Table 1.1 Accuracy and Precision of the HydraProbes’ Parameters.
*TUC Temperature uncorrected full scale
**TC Temperature corrected from 0 to 35o C
† The Accuracy and precision of the soil moisture, and EC measurements as well as the
temperature corrections, are highly soil dependent.
The two digital versions (SDI-12 and RS-485) incorporate a microprocessor to process the information from the
probe into useful data. This data is then transmitted digitally to a receiving instrument. SDI-12 and RS-485 are
two different methods of transmitting digital data. In both versions there are electrical and protocol specifications
that must be observed to ensure reliable data collection.
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The Analog version requires an attached instrument to measure voltages. This information must then be processed
to generate useful information. This can be done either in the attached instrument, such as a data logger, or at a
central data processing facility.
All configurations provide the same measurement parameters with the same accuracy. The underlying physics
behind how the HydraProbe works and the outer construction are also the same for each configuration. Table
1.2 provides a physical description of the HydraProbe.
Feature Attribute
Probe Length 12.4 cm (4.9 inches)
Diameter 4.2 cm (1.6 inches)
Sensing Volume* Length 5.7 cm (2.2 inches)
(Cylindrical measurement region) Diameter 3.0 cm (1.2 inches)
Weight 200g (cable 80 g/m)
Power Requirements 7 to 20 VDC (12 VDC typical)
Temperature Range** -10 to 65o C
Storage Temperature Range -40 to 75o C
Table 1.2 Physical description of the HydraProbe (All Versions)
*The cylindrical measurement region or sensing volume is the soil that resides between the stainless steel tine
assembly. The tine assembly is often referred to as the wave guide, and probe signal averages the soil in the
sensing volume.
** Standard temperature range is -10 to 60oC. Extended range models are available.
Figure 1.1. The Portable HydraGO-C and HydraGO -S allows for wireless on the go measurements of soil moisture. Connect
via Bluetooth with to smartphone with HydraGO App.
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Figure 1.2, The eTracker Cellular Gateway can take sensor inputs directly to the cloud.
Figure 1.3. The SDI-12 Xplorer USB Adapter. For testing any SDI-12 device with a USB.
Figure 1.4. The Tempe Cell for custom calibrations, soil water retention curves
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2 Installation
2.1 Precautions
The HydraProbe is relatively easy to install depending on conditions in the field.
Avoid Damage to the HydraProbe:
● Do not subject the probe to extreme heat over 70 degrees Celsius (160 degrees Fahrenheit).
● Do not subject the probe to fluids with a pH less than 4.
● Do not subject the probe to strong oxidizers like bleach, or strong reducing agents.
● Do not subject the probe to polar solvents such as acetone.
● Do not subject the probe to chlorinated solvents such as dichloromethane.
● Do not subject the probe to strong magnetic fields.
● Do not use excessive force to drive the probe into the soil because the tines could bend. If the probe has
difficulty going into the soil due to rocks, simply relocate the probe to an area slightly adjacent.
● Do not remove the HydraProbe from the soil by pulling on the cable.
While the direct burial cable is very durable, it is susceptible to abrasion and cuts by shovels. The user should use
extra caution not to damage the cable or probe if the probe needs to be excavated for relocation.
Do not place the probes in a place where they could get run over by tractors or other farm equipment. The
HydraProbe may be sturdy enough to survive getting run over by a tractor if it is buried; however, the compaction
of the soil column from the weight of the vehicle will affect the hydrology and thus the soil moisture data.
DO NOT place more than one probe in a bucket of wet sand while logging data. More than one HydraProbe in
the same bucket while powered may create an electrolysis affect that may damage the probe.
Other factors to consider would be tree canopy, slope, surface water bodies, and geology. Tree canopy may affect
the influx of precipitation/irrigation. Upper slopes may be better drained than depressions. There may be a shallow
water table near a creek or lake. Hill sides may have seeps or springs.
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Figure 2.1Goundwater pathways and Surface water. Taken from USGS Report 00-4008
Figure 2.2 Groundwater flow direction and surface water body. Taken from USGS report 00-4008.
Figures 2.1 and 2.2 illustrate subsurface water movement in the water table. The HydraProbe data is most
meaningful in the unsaturated zone where soil moisture values will fluctuate. If the water table rises to the depth
of the HydraProbe, the HydraProbe soil moisture measurements will be at saturation and will be indicative of the
porosity. If the user is interested in groundwater level measurements in wells, a water depth sensor might provide
the necessary information.
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2.3 Soil Sensor Depth Selection
Like selecting a topographical location, selecting the sensor depth depends on the interest of the user. Farmers
will be interested in the root zone depth while soil scientists may be interested in the soil horizons.
Depending on the crop and the root zone depth, in agriculture two or three HydraProbes may be installed in the
root zone and one HydraProbe may be installed beneath the root zone. The amount of water that should be
maintained in the root zone can be calculated by the method described in section 6. The probe beneath the root
zone is important for measuring excessive irrigation and downward water movement.
The soil horizons often dictate the depths of the HydraProbes’ placement. Soil scientist and groundwater
hydrologist are often interested in studying soil horizons. The Stevens HydraProbe is an excellent instrument for
this application because of the accuracy and precision of the volumetric water fraction calibrations. Soil horizons
are distinct layers of soil that form naturally in undisturbed soil over time. The formation of soil horizons is called
soil geomorphology and the types of horizons are indicative of the soil order (see table 2.1) Like other natural
processes, the age of the horizon increases with depth. The reason why it is so useful to have a HydraProbe in
each horizon is because different horizons have different hydrological properties. Some horizons will have high
hydraulic conductivities and thus have greater and more rapid fluctuations in soil moisture. Some horizons will
have greater bulk densities with lower effective porosities and thus have lower saturation values. Some horizons
will have clay films that will retain water at field capacity longer than other soil horizons. Knowledge of the soil
horizons in combination with the HydraProbes accuracy will allow the user to construct a more complete picture
of the movement of water in the soil. The horizons that exist near the surface can be 6 to 40 cm in thickness. In
general, with increasing depth, the clay content increases, the organic matter decreases and the base saturation
increases. Soil horizons can be identified by color, texture, structure, pH and the visible appearance of clay films.
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More information about soil horizons is provided by the USDA National Resource Conservation Service at
https://www.nrcs.usda.gov/wps/portal/nrcs/detail/soils/edu/?cid=nrcs142p2_054308
More information about the soil horizons in your area can be found by in a soil survey. A soil survey for your
area can be found at http://soildatamart.nrcs.usda.gov/
Soil Property
Horizon
O Decaying plants on or near surface
A Top Soil, Organic Rich
B Subsoil, Most Diverse Horizon and the Horizon with the most sub
classifications
E Leached Horizon (light in color)
C Weathered/aged parent material
Table 2.1 Basic description of soil horizons.
Figure 2.4 Soil Horizons. Figure 2.5 Illustration of soil horizons. In this frame,
the soil horizons are very distinct and show the geological
history of the soil.
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2.4 Installation of the HydraProbe into the Soil
2.4.2 Test the Probes and logger in the Office before going into the Field
It is recommend to setup the logger with the sensors in the office and running the system before installing in the
field. This will allow the users to become familiar with the system and identify any problems. The HydraProbes
can be placed in water to test functionality. See section 3.1.4
2.4.3 Labeling
It is helpful to label the sensor at the head so they can be quickly identified before going in the hole. The cable at
the logger end should also be labeled. The serial number and address should be documented. The serial number
is printed on the label or use the SDI-12 “aI!” command to get the serial number.
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Push the tines of the HydraProbe into the soil until the base plate is flush with the soil. The tines should be parallel
with the surface of the ground, i.e. horizontal. Avoid rocking the probe back and forth because this will disturb
the soil and create a void space around the tines. Again, it is imperative that the bulk density of the soil in the
probe’s measurement volume remain unchanged from the surrounding soil. If the bulk density changes, the
volumetric soil moisture measurement and the soil electrical conductivity will change.
Figure 2.7 Horizontal placement sensor and dipping the cable is recommended
It is recommended to keep the tine assembly horizontal with the ground particularly near the surface. A drain loop
can be put in the cable to prevent water from running down the cable to the probe’s sensing area.
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The user may also want to run the HydraProbe cable through a metal conduit like the one shown in figure 2.3 to
add extra protection to the cable.
Once the probes are wired to the logger, test the communication between the logger and all of the probes. This
can be achieved by current reading features in the logger or in SDI-12 transparent mode. See Appendix A for
SDI-12 command or Appendix B for RS485 Commands.
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Figure 2.8. Xplorer SDI-12 to USB Adapter Stevens part number 51139 for testing SDI-12 bus or individual SDI-12 Sensors.
If the soil is not trampled down while it is being back filled, the compaction and bulk density of the backfill will
be considerably less than the native undisturbed soil around it. After a few months, the backfilled soil will begin
to compact on its own and return to a steady state bulk density. The HydraProbe will effectively be residing in
two soil columns. The tines will be in the undisturbed soil column, and the head, cable and conduit will be in the
backfill column that is undergoing movement. The compaction of the backfilled soil may dislodge the probe and
thus affect the measurement volume of the probe. After the probes are installed, avoid foot traffic and vehicular
traffic in the vicinity of the probes.
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2.7 Lightning
Lightning strikes will cause damage or failure to the HydraProbe or any other electrical device, even though it is
buried. In areas prone to lightning, surge protection and /or base station grounding is recommended.
While lightning can hit the logger station, the voltage surge propagating underground can cause serious damage
to soil sensors. Underground voltage surges are called earth surge transients and the station needs to be protected
both above and below ground.
For maximum protection from lightning, attach a dual lightning dissipators to the top of the lightning rod 3 to 6
meters above the ground surface. Using at least a 1 cm thick copper cable, connect the dissipator to a series of
buried copper rod 2 cm in diameter. The buried copper rods should be at least 2 meters long buried horizontally
1.5 to 2 meters deep. Figures 2.9 and 2.10 show grounding of the soil monitoring location and the logger station.
More information can be found in the Soil Sensor Lightning Protection Guide located at
http://www.stevenswater.com/products/sensors/soil/hydraprobe/
Figure 2.9. Place grounding rods around the perimeter of the soil monitoring area
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Place a series of grounding rods 2 to 4 meters away from the soil probes two meters deep and clamp and connect
them with a copper cable. Circle the soil sensors with the grounding rods in a way so that electrical surges
propagating through the ground will go around the soil sensors.
Figure 2.10. Ground the logger station with dual dissipators and ground rod.
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HydraProbes have a longevity in soil and a long warranty period, therefore; it is recommend to record the serial
numbers on the probes for support purposes.
3.1 Trouble shooting at the Logger end and Out of the ground
Section 3.1 summarizes the steps the user should take if the HydraProbe is unresponsive or outputs data that is
suspect. If the probes are in the ground, it is best to try to trouble shoot at the logger end before digging the probes
up. Keep in mind that digging the probes out of the ground can be labor intensive and may disturb the other probes
in the soil column. If the probe have to be dug out of the ground, they can be tested in water to determine if they
are functioning properly.
If the logger has an SDI-12 Transparent mode, issues SDI-12 commands to the sensors on the bus. The “aI!”
command can give the serial number. Use the “aM!; aD0!, aD1! aD2!” command to take a reading. Tables 3.1
and 3.2 are a summary of the commands. Isolating the suspect sensor and testing it when it is by itself may also
be helpful. An SDI-12 to USB adapter such as the Stevens Xplorer (Figure 2.8) can be used to trouble shoot SDI-
12 sensors.
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To verify that the HydraProbe is functioning properly perform the following commands: Place the HydraProbe
in distilled water in a plastic container. Make sure the entire probe is submerged. In transparent mode and with
the third parameter set (aM3!), type “1M3!” followed by “1D0!” (with a probe address of 1 for this example).
The typical response of a HydraProbe that is functioning properly should be 1+77.895+78.826+2.462. From this
example, the real dielectric permittivity is 77.895, and the imaginary dielectric permittivity is 2.462. According
to factory specifications, the dielectric constant should be from 75 to 85 and the imaginary dielectric permittivity
should be less than 5. If distilled water is not available, the user may use tap water for this procedure. It is
important to note, however, that tap water may contain trace levels of material that may affect the dielectric
permittivities readings. Isopropyl alcohol with a dielectric constant of 18.6 @20 degree C can also be used.
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It’s important to note that the soil that resides between the tine assembly is where the measurements are taken. If
there is a void space in the soil between the tines, this will affect the hydrology where the HydraProbe is taking
measurements. If the void space is saturated with water, it will increase the soil moisture measurement. If the void
space is not fully saturated, the soil will appear dryer. Figure 3.1 shows the measurement volume where the
HydraProbe takes measurements and a void space between the tine assembly. These void spaces can occur from
a poor installation, such as rocking the probe side to side or not fully inserting the probe into the soil.
Figure 3.1 Measurement volume with a void space between the tine assembly.
Void spaces between the tine assembly can also occur from changing soil conditions. Factors such as shrink/swell
clays, tree roots or pebbles may introduce a void space. The following sections describe some of these and other
factors.
3.2.1 Evapotranspiration
Water in the soil will be pulled downward by gravity, however during dry periods or in arid regions, the net
movement of water is up toward the surface. Water will move upward in the soil column by a phenomenon called
Evapotranspiration (ET). ET is the direct evaporation out of the soil plus the amount of water being pulled out of
the soil by plants. Factors such as wind, temperature, humidity, solar radiation and soil type play a role in the rate
of ET. If ET exceeds precipitation, there will likely be a net upward movement of water in the soil. With the net
upward movement of soil water, ET forces dissolved salts out of solution and thus creating saline soil conditions.
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3.2.2 Hydrology and Soil Texture
Sandy soils drain better than soils that are clay rich. In general, the smaller the soil particle size distribution, the
slower it will drain. Sometimes silt may have the same particle size distribution, as clay but clay will retain more
water for longer periods of time than silt. This can be explained by the shape of the soil particles. Clay particles
are planar whereas silt particles are spherical. Water basically gets stuck between the planar plate shaped clay
particles and thus slows the flow of water.
There is also a relationship between soil bulk density and the complex dielectric permittivity. The soil dry bulk
density (ρb) can be described by equation [3.1]
Where m is the mass of the dry soil in grams and V is the volume in cubic centimeters.
The bulk density is associated with the density of a soil ped or a soil core sample. The particle density (ρp ) is
the density of an individual soil particle such as a grain of sand. The two densities should not be confused with
one another. Because Er and Ei of dry soil is a function of both the bulk and particle densities (ρb, ρp ), the soil
density often creates the need for soil specific calibrations. The relationship between porosity, bulk and particle
density can be described by equation [3.2]
%
𝜑 = 1 − & [3.2]
%'
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3.2.5 Rock and Pebbles
Often times, it will be obvious if a rock is encountered during an installation. Never use excessive force to insert
the probe into the soil. Some soils will have a distribution of pebbles. If a pebble finds its way between the probe’s
tines, it will create an area in the measurement volume that will not contain water. The probe will signal average
the pebble and thus lower the soil moisture measurement. If the pebble is an anomaly, relocating of the probe
would provide more representative soil measurements. However, if it is revealed from the soil survey that there
exists a random distribution of pebbles, a pebble between the tines may provide realistic measurements because
of the way pebbles influence soil hydrology.
3.2.6 Bioturbation
Organisms such as plants and burrowing animals can homogenize soil and dislodge soil probes. A tree root can
grow between the tines affecting the measurements and in some cases, tree roots can bring a buried soil probe to
the soil surface. Burrowing mammals and invertebrates may decide that the HydraProbes’ tine assembly makes
an excellent home. If the HydraProbe’s tine assembly becomes home to some organism, the soil moisture
measurements will be affected. After the animal vacates, the soil will equilibrate and the soil measurements will
return to representative values.
The cable leading to the probe may also become a tasty treat for some animals. If communication between the
logger and the probe fails, check the cable for damage. A metal conduit like the one shown in figure 2.3 is
recommended.
In general, if the electrical conductivity reaches 1 S/m, the soil moisture measurements will be significantly
affected. The imaginary dielectric constant will have an influence on the real dielectric constant because dissolve
cations will inhibit the orientation polarization of water. When addressing the HydraProbes’ performance in salt
affected soil, it is useful to use the loss tangent equation [3.3].
-.
𝑇𝑎𝑛 𝛿 = [3.3]
-/
The loss tangent (Tan δ) is simply the imaginary dielectric constant divided by the real dielectric constant. If Tan
δ becomes greater than 1.5 than the HydraProbes calibration becomes unreliable. It is interesting to note that the
HydraProbe will still provide accurate dielectric constant measurements up to 1.5 S/m. If the salt content reaches
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For Firmware 2.9 and 3.0
a point where it is affecting the calibrations, the user can use a custom calibration that will still provide realistic
soil moisture measurements in the most salt affected soils. See Appendix C for custom calibrations.
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Figure 4.1. TensioMark SDI-12 heat capacitance based Matric Potential Sensor. (PN 51133-200)
Figure 4.2. Soil Water Retention Curve. Soil matric potential verse soil moisture.
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4.3 Electromagnetic Soil Water Methods and Soil Physics
The behavior of electromagnetic waves from 1 to 1000 MHz in soil can be used to measure or characterize the
complex dielectric permittivity. Dielectric permittivity was first mathematically quantified by Maxwell’s
Equations in 1870s. In the early 1900s, research with radio frequencies led to modern communication and the
arrival of the television in the 1950s. In 1980, G. C. Topp (Topp 1980) proposed a method and a calibration to
predict soil moisture based on the electrical properties of the soil known as the Topp Equation. Today, there are
dozens of different kinds of soil moisture sensors commercially available that in one way or another base their
soil moisture estimation on the dielectric permittivity. Among all of the electronic soil sensors commercially
available, measurement involving the complex dielectric permittivity remains the most practical way to determine
soil water content from an in situ sensor or portable device. Electromagnetic soil sensors use an oscillating radio
frequency and the resultant signal is related to the dielectric permittivity of the soil where the in situ soil
particle/water/air matrix is the dielectric. Subsequent calibrations then take the raw sensor response to a soil
moisture estimation.
k * = e r - je i [4.1]
where К* is complex dialectic permittivity, εr is the real dielectric permittivity, εi is the imaginary dielectric
permittivity and j = - 1 (Topp 1980). As the radio wave propagates and reflects through soil, the properties and
water content of the soil will influence the wave. The water content, and to a less extent the soil properties will
alter and modulate electromagnet radio signal as it travels through the soil by changing the frequency, amplitude,
impedance and the time of travel. The Dielectric permittivity can be determined by measuring these modulations
to the radio frequency as it propagates through the soil. In general, the real component represents energy storage
in the form of rotational or orientation polarization which is indicative of soil water content. The real dielectric
constant of water is 78.54 at 25 degrees Celsius and the real dielectric permittivity of dry soil is typically about
4. Changes in the real dielectric permittivity are directly related to changes in the water content and all
electromagnetic soil sensors base their moisture calibrations on either a measurement or estimation of the real
dielectric permittivity of the soil particle/water/air matrix. (Jones 2005, Blonquist 2005). The imaginary
component of the dielectric permittivity,
s dc
e i = e rel + [4.2]
2pfe v
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represents the energy loss where εrel is the molecular relaxation, f is the frequency, εv permittivity of a vacuum,
and σdc is DC electrical conductivity. In most soils, εrel is relatively small and a measurement of the imaginary
component yields a good estimation of the electrical conductivity from 1 to 75 MHz (Hilhorst 2000). In sandy
soils, the molecular relaxation can be negligible. The HydraProbe estimates electrical conductivity by measuring
the imaginary and rearranging equation [4.2] based on the assumption that the relaxations are near zero.
The storage of electrical charge is capacitance in Farads and is related to the real component (non-frequency
dependent) by
C = gε εv [4.3]
Where g is a geometric factor and ε is the dielectric constant. If the electric field of the capacitor is oscillating
(i.e. electromagnetic wave), the capacitance also becomes a complex number and can be describe in a similar
fashion as the complex dielectric permittivity in equations [4.1] and [4.2] (Kelleners 2004).
The apparent dielectric permittivity εa, is a parameter that contains both the real and the imagery dielectric
permittivities and is the parameter used by most soil sensors to estimate soil moisture.
εa = {1+[1+tan2(εi/εr)]1/2}εr/2 [4.4]
From equation [4.4], the apparent dielectric permittivity is a function of both real and imaginary components
(Logsdon 2005). High values of εi will inflate the εa which may cause errors in the estimation of soil moisture
content. In an attempt to shrink the errors in the moisture calibration from the εi, some soil sensors such as time
domain reflectometry will operate at high frequencies giving the εa more real character. In practice, soils high in
salt content will inflate the soil moisture measurement because εa will increase due to the DC conductivity
component of εi. Also, the εi is much more sensitive to temperature changes than εr creating diurnal temperature
drifts in the soil moisture data (Blonquist 2005, Seyfried 2007). The soil moisture sensors that can best isolate the
real component and delineate it from the imaginary will be the most accurate and will have a lower inter-sensor
variability.
Water is a polar molecule, meaning that one part of the water molecule caries a negative charge while the other
half of the molecule caries a positive charge. While water is very polar, soils are rather non-polar. The polarity of
water causes a rotational dipole moment in the presence of an electromagnetic wave while soil remains mostly
uninfluenced. This means that water will rotate and reorientate with the rise and fall of the oscillating electric
field i.e. electromagnetic wave while soil remains mostly stationary. From 1 to 1000 MHz, the water rotational
dipole moment of water will occur at the same frequency of the electromagnetic wave. It is this rotational dipole
moment of water that is responsible for water’s high dielectric constant1 of about 80. Dry Soil will have a dielectric
constant of about from about 4 to 5. Large changes in the dielectric permittivity will are directly correlated to
changes in soil moisture. Figure 4.2 shows the polarity of a water molecule and how it can reorient itself in
response to electromagnetic oscillations.
1
Terminology note. The term “real dielectric constant” generally refers to a physical property that is constant at a specified condition. The term “real
dielectric permittivity” or “real permittivity” refers to the real dielectric constant of a media that is undergoing change, such as soil.
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Figure 4.3. A water molecule in the liquid phase reorienting i.e. rotational dipole moment.
Figure [4.3] illustrates the different kinds of polarizations exhibited by most materials. Soils will have space
charge and atomic polarizations while water will re-orientate.
Figure [4.4]. Illustration of polarization. The real dielectric permittivity of soil is mostly due to orientation polarization of
water (Taken from Lee et al. 2003)
4.3.2 Temperature
Both the real and imaginary dielectric permittivities will be influenced by temperature. The imaginary component
is much more sensitive to changes in temperature than the real component. (Seyfried 2007).
Both time domain reflectometry (TDR and time domain transmission (TDT) use the time of travel of the radio
wave to measure the apparent permittivity (Blonquist 2005-A). The primary difference between TDR and TDT
is TDR characterizes the reflected wave where as TDT characterizes the travel time on a wave guide of a set path
length.
Capacitance can be measured from the change in frequency from a reflected radio wave or resonance frequency
(Kelleners 2004). These sensors are often referred to as frequency domain reflectometers (FDR), however the
term FDR is often misused because most frequency sensors are using a single frequency and not a domain of
frequencies. Other capacitance probes and amplitude impedance-based probes are often mistakenly referred to as
“FDRs”.
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For Firmware 2.9 and 3.0
The capacitance of a parallel plate capacitor can be measured from the time it takes to charge the capacitor. Some
commercially available soil sensors can measure the capacitance of the soil from the time of charge and then
calibrate for soil moisture.
Another method for determining the apparent permittivity is measuring the difference between the incident
amplitude and the reflected amplitude (Gaskin 1996).
4.4.2 Advantages of using the real dielectric permittivity over the apparent permittivity
Unlike most other soil sensors, the HydraProbe measures both the real and the imaginary components of the
dielectric permittivity as separate parameters. The HydraProbe bases the soil moisture calibration on the real
dielectric permittivity while most other soil moisture technologies base their soil moisture estimation on the
apparent permittivity which is a combination of the real and imaginary components as defined in equation [4.4]
(Logsdon 2010). Basing the soil moisture calibration on the real dielectric permittivity instead of the apparent
permittivity has many advantages. Because the HydraProbe separates the real and imaginary components, the
HydraProbe’s soil moisture calibrations are less affected by soil salinity, temperature, soil variability and inter
sensor variability than most other electronic soil sensors.
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There are a number of other units used to measure soil moisture. They include % water by weight, % available
(to a crop), and inches of water to inches of soil, % of saturation, and tension (or pressure). It is important to have
an understanding of the different water to express soil moisture and the conversion between units can be highly
soil dependent.
Because the bulk density of soil is so highly variable, soil moisture is most meaningful as a water fraction by
volume or volumetric percent. If weight percent were used, it would represent a different amount of water from
one soil texture to the next and it would be very difficult to make comparisons. .
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For Firmware 2.9 and 3.0
because the fill point is determined by looking at changes in soil moisture and not the actual soil moisture itself.
This in some ways can be more efficient because lower cost soil moisture sensors can be used without calibration.
While the fill point method can be easy to implement and is widely used for many crops, the mass balance method
however can better optimize the irrigation, better control salinity build up, and minimize the negative impacts of
over irrigation.
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Figure 5.1. Unsaturated soil is composed of solid particles, organic material and pores. The pore space will contain air and
water.
The lower soil moisture limit is a very important value because dropping to or below this value will affect the
health of the crops. Equations 5.1, 5.2, and 5.3 and the example below show how to calculate the lower soil
moisture limit and the soil moisture target for irrigation optimization.
Figure 5.3 can be used to help determine the soil moisture targets based on soil texture. Soil texture is
determined by the percentages of sand, silt, and clay using figure 5.4. Note that figures 5.3, and 5.4 and table
5.1 general trends. The actual MAD and field capacity and Permanent wilting point may vary with region, soil
morphologies, and the crop.
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Soil Saturation θSAT Field Capacity θFC Permanent Wilting Point θpw
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Answer:
From tables 5.1 and 5.2 the MAD = 0.5, From Figure 5.3 (or a soil surrey) θPWP = 16% and the field capacity,
θFC is 32%. Therefor using equations 5.1 to 5.3, the optimal soil moisture is 24 to 32%. θFC – θ = 32% - 16% =
16%. Therefor the soil needs to be irrigated to increase the soil moisture by 16% down to 24 cm, 16% X 24 cm =
3.8 cm of water need to be added. If the sprinkler is 75% efficient than 3.8 cm/0.75 = 5.12 cm of water should be
applied. Note the rate of water coming out of the sprinkler should not exceed the infiltration rate of the soil and
the run time of the sprinklers would depend on the specification of the sprinkler.
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For Firmware 2.9 and 3.0
5.2.3 Soil Moisture Calibrations
The soil moisture calibration is an estimation of the soil moisture from a mathematical equation that contains the
real dielectric permittivity (Topp 1980). The HydraProbe has 3 factory calibrations to choose from and custom
calibration features in case a specific site calibration is necessary. The factory GENERAL or GEN calibration
is the best general purpose calibration available and is the default calibration on the HydraProbe’s firmware. The
GEN calibration is based on research conducted by the US Department of Agriculture, Agricultural Research
Service (Seyfried 2005) and is the standard calibration for the US Department of Agriculture’s SNOTEL, SCAN
networks and NOAA’s Climate Reference Network. The factory default GEN calibration is equation [A2] in the
appendix C where A = 0.109, B = -0.179 and εr is the raw real dielectric permittivity.
It is recommended to keep the HydraProbe set to the default calibration. If the soil requires a custom calibration
or if further validation of the calibration is needed, the real dielectric permittivity (Parameter 6 on “aM!, aC!) can
be logged until a new calibration can be developed. See appendix C for more information about calibration
validation and development.
The electrical conductivity parameters are calculated from the imaginary dielectric permittivity by rearranging
equation [4.2]. The calculation of EC is based on the assumption that the molecular relaxations are negligible or
very small. This assumption provides a good approximation for EC in sandy or silty soils where molecular
relaxations are minimal. The approximation of EC from the imaginary permittivity in clay rich soils however will
be less accurate due to the possible presents of molecular relaxations. While the accuracy of the EC parameters
in soil are highly soil dependent, the HydraProbe’s EC measurements in slurry extracts, water samples, and
aqueous solutions will be accurate (<+/- 1 to 5%) up to 0.3 S/m. Because EC can be sensitive to changes in
temperature, a temperature correction is provided.
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For Firmware 2.9 and 3.0
Soil salinity is dissolved salts such as sodium chloride, calcium chloride and magnesium chloride. The salts may
not only be chlorides but carbonates as well. Fertilizers such as nitrates do not have a strong conductivities
therefore the EC measured in a soil is primarily going to be attributed to the sodium and soil moisture.
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5.3.3 Bulk EC and EC Pathways in Soil
Soil is a matrix that is basically composed of solid material, water in the pore spaces and air. In situ soil sensors
(soil sensors in the ground) measure the dc bulk electrical conductivity (σb) which is the electrical conductivity
of the soil/water/air matrix combined. Figure [5.3] shows the three pathways the electrical conductivity can
propagate in soil. The bulk density, the porosity, the tortuosity, the water content, and the dissolved ion
concentration working in concert with the different pathways, dramatically influences the bulk electrical
conductivity of a soil.
Pathway 1 is the electrical pathway that goes from water to the soil and back through the water again. The
electrical conductivity contribution of pathway 1 is a function of the conductivity of the water and soil. As water
increases, the electrical conduit of pathway 1 increases which may increase the electrical conductivity of the soil
as a whole.
Pathway 2 is the pathway that is attributed to the electrical conductivity of the just the water in the soil pores.
Increasing the dissolved salts will increase the conductivity of pathway 2; however, like pathway 1, increases in
the soil water content will increase the size of the pathway thus increasing the overall bulk electrical conductivity.
That is to say, that there are two factors influencing the electrical conductivity of pathway 2, namely the dissolved
salt concentration and the size of the pathway attributed to the amount of water in the soil.
Figure 5.3 Three Pathways of electric conductivity in soil matrix. 1, water to solid, 2 soil moisture, 3 solid. Taken from
Corwin et al. (2003).
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Pathway 3 is the electrical conductivity of the soil particles. Like the other pathways, the contribution of pathway
3 in influenced by a number of factors that include bulk density, soil type, oxidation/reduction reactions and
translocation of ions.
The bulk EC measurements provided by the HydraProbe the electrical conductivity of the dynamic soil matrix as
a whole which is the sum of the electrical conductivities from all of the different pathways. No in situ soil sensor
can directly distinguish the difference between the different pathways nor can any conventional in situ soil sensor
distinguish the difference between sodium chloride and any other number of ions in the solution that all have
some influence on electrical conductivity of the soil/water/air matrix.
In some circumstance, the pore water EC can be estimated from knowledge about the dielectric permittivity of
the soil (Hilhorst 1999). Equation [5.6] allows the user to make comparable pore water EC estimates from bulk
EC measurement in most soils;
-/' 2&
𝜎1 = [5.6]
-/& 3-/&_5
Where σp is the pore water EC, εrp is the real dielectric content of water (≈80), σb is the bulk EC measured with
the HydraProbe in soil, and εrb is the real dielectric permittivity of the soil measure with the HydraProbe. εrb_O
is an offset, and 3.4 can be used as the offset for most inorganic soils.
To verify the TDS estimation from EC or perhaps correct equation [5.7] for a specific water sample, the user
can dry down a water sample and obtain the weight of the material left behind for a true gravimetric
measurement of TDS. Note that if the HydraProbe EC measurement is used to estimate the TDS, the stainless
steel tines need to be completely submerged in the water sample or the water extract of the slurry.
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SDI-12 (serial data interface at 1200 baud) communications protocol allows compatible devices to communicate
with each other. More information about SDI-12 can be found at http://www.sdi-12.org/.
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A) Type “1M!”. The response should be 10029. This means that a sensor with an address of 1 will take
2 seconds to return 9 parameters with one or more D commands.
B) Type “1XM!”. The response should be 1HJFGOKMLN. This means that the sensor with address 1 has
been set to the first default Parameter set. The letters correspond to parameters that the HydraProbe is
capable of measuring in this set. Most users are only interested in H, J, F, and G. If the probe has
another parameter set, you may wish reset the probe to the first parameter set by typing “1XM=0!” or
the user may type “1XM=GH!’ to only measure soil moisture and temperature.
Measurement Commands
The HydraProbe can return any of 21 values, or parameters, as they are called in SDI-12 terminology. The
following table lists the values and letter used to refer to them:
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SDI-12 Parameters
Selector Description Units
A Voltage 1 Volts
B Voltage 2 Volts
C Voltage 3 Volts
D Voltage 4 Volts
E Voltage 5 Volts
F Soil Temperature Celsius
G Soil Temperature Fahrenheit
H Soil Moisture Water fraction by
Volume (wfv)
I Dielectric Loss Tangent -
J Soil Conductivity (temp. corrected) Siemens / Meter
(S/m)
K Real Dielectric Permittivity -
L Real Dielectric Permittivity (temp. -
corrected)
M Imaginary Dielectric Permittivity -
N Imaginary Dielectric Permittivity -
(temp. Corrected)
O Soil Conductivity Siemens / Meter
P Diode temperature Celsius
R ADC Reading 1 -
S ADC Reading 2 -
T ADC Reading 3 -
U ADC Reading 4 -
V ADC Reading 5 -
Table A4 – Parameter Selectors
The HydraProbe responds to the start measurement command aM!, as well as 5 additional measurement
commands, aM1! - aM5!. Each measurement command responds with a different subset of the total parameter
set. The start measurement command, aM!, returns a set of readings that is user-configurable through the use of
SDI-12 extended commands. This feature allows any of the 21 parameters to be accessed by older SDI-12 loggers,
many of which do not support more than one measurement command. Instructions for configuring this reading
set can be found in the Extended Commands section of this appendix.
The following measurement set descriptions detail the parameters returned by each of the measurement
commands. For the aM! command, only the default reading set is listed.
All data transmitted using SDI-12 must be printable ASCII characters. The first character of any command or
response is the address. The lowercase 'a' at the beginning of each command represents the address character.
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SDI-12 Measurement Sets
Command Response Parameters – Refer to Table 1
P1 P2 P3 P4 P5 P6 P7 P8 P9
aM! H J F G O K M L N
aM1! F G I
aM2! F G H O J I
aM3! K L M N O P
aM4! A B C D E
aM5! R S T U V
Table A4 – Measurement Command Sets
SDI-12 Extended Command Summary
The HydraProbe implements a number of SDI-12 extended commands. The following table lists all of the supported extended
commands and a brief description:
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For Firmware 2.9 and 3.0
<set> String of 1-9 ASCII characters that specify the measurements taken by the standard measurement
command (aM!). Valid values are any of the letters A-V. The default measurement set is
HJFGOKMLN.
<id-string> After sending the I command “aI!” the probes returns an identification string containing the
manufacturer, model number, version and manufacturer specific data. In this case the specific data
is the soil type and serial number. Example:
012STEVENSW0936402.9STGSN00123456
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For Firmware 2.9 and 3.0
The RS-485 HydraProbe has 4 wires: a ground wire, a +12 volt power wire and 2 data wires. The RS-485
HydraProbe communicates through two data wires and can be wired into a RS-485 port on a logger. They can be
connected to a terminal assembly like the SDI-12 version, but with four wires instead of three. The advantage
RS-485 has over the SDI-12 version is that the RS-485 version’s cable can run over 3000 feet. The disadvantage
is that it draws more power.
● COM Port should be set to correspond with actual port on the PC where the communications cable is
plugged in. For instance COM1, COM2, etc.
● Baud rate should be set to 9600
● Data bits should be set to 8
● Parity should be set to none.
● Stop bits should be set to 1 (one).
● Flow control should be set to none.
In addition, these setting will make the program easier to use. In a terminal emulator these settings are found in
the setup options:
● Select “Send line ends with line feeds”. All commands sent to an RS-485 version of the
HydraProbe must end with a “Carriage Return” “Line Feed” pair.
● Select “Echo typed characters locally”. The HydraProbe does not echo any commands.
Checking this enables you to see what you have typed.
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For Firmware 2.9 and 3.0
Stevens HydraProbe RS-485 Command Specification
For Use with Firmware Version 2.9, 3.0 and Later
Command Format
AAACC<CR><LF> Execute
AAACC=?<CR><LF> Query current setting
AAACC=XXX…<CR><LF> Assign new value
Other Grammar
<d>: Digit, ASCII ‘0’ through ASCII ‘9’
<a>: ASCII ‘A’ through ASCII ‘D’, used for custom water constant
Information Commands
Serial Number
Description: Returns the factory serial number.
Access Level: Read only
Read Addresses: Broadcast, Exact
Read Command: <addr>SN=?<CR><LF>
Read Response: <addr><serial><CR><LF>
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Firmware Version
Description: Returns the firmware version number.
Access Level: Read only
Read Addresses: Broadcast, Exact
Read Command: <addr>FV=?<CR><LF>
Read Response: <addr><firmware><CR><LF>
Address
Description: Gets/sets the probe address.
Access Level: Read/Write
Read Addresses: Broadcast, Exact
Read Command: <addr>AD=?<CR><LF>
Read Response: <addr><CR><LF>
Write Addresses: Exact
Write Command: <addr>AD=<serial><new_addr><CR><LF>
Write Response: <new_addr><CR><LF>
Location
Description: Gets/sets the probe location.
Access Level: Read/Write
Read Addresses: Broadcast, Exact
Read Command: <addr>LO=?<CR><LF>
Read Response: <addr><text><CR><LF>
Write Addresses: Exact
Write Command: <addr>LO=<text><CR><LF>
Write Response: <addr><text><CR><LF>
Description
Description: Gets/sets the probe description.
Access Level: Read/Write
Read Addresses: Broadcast, Exact
Read Command: <addr>DS=?<CR><LF>
Read Response: <addr><text><CR><LF>
Write Addresses: Exact
Write Command: <addr>DS=<text><CR><LF>
Write Response: <addr><text><CR><LF>
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For Firmware 2.9 and 3.0
Debug Commands
Probe Enable
Description: Gets/sets whether the probe circuitry is enabled.
Access Level: Read/Write
Read Addresses: Broadcast, Exact
Read Command: <addr>PE=?<CR><LF>
Read Response: <addr><bool><CR><LF>
Write Addresses: Exact
Write Command: <addr>PE=<bool><CR><LF>
Write Response: <addr><bool><CR><LF>
Measurement Commands
Take Reading
Description: Instructs a probe or group of probes to take a reading sample.
Access Level: Execute
Execute Addresses: Broadcast, Exact, Wildcard
Execute Command: <addr>TR<CR><LF>
Execute Response: (none)
T0 - Transmit Set 0:
H) Moisture
J) Soil Electrical Conductivity (tc)
F) Temp C
G) Temp F
O) Soil Electrical Conductivity
K) Real Dielectric Permittivity
M) Imag Dielectric Permittivity
L) Real Dielectric Permittivity (tc)
N) Imag Dielectric Permittivity (tc)
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For Firmware 2.9 and 3.0
T1 - Transmit Set 1:
F) Temp C
G) Temp F
I) Loss Tangent
T2 - Transmit Set 2:
F) Temp C
G) Temp F
H) Moisture
O) Electrical Conductivity
J) Electrical Conductivity (tc)
I) Loss Tangent
T3 - Transmit Set 3:
K) Real Dielectric Permittivity
L) Real Dielectric Permittivity (tc)
M) Imag Dielectric Permittivity
N) Imag Dielectric Permittivity (tc)
O) Soil Electrical Conductivity
P) Diode Temperature
Q) Blank
T4 - Transmit Set 4:
A) V1 (volts)
B) V2 (volts)
C) V3 (volts)
D) V4 (volts)
E) V5 (volts)
T5 - Transmit Set 5:
R) V1 raw adc
S) V2 raw adc
T) V3 raw adc
U) V4 raw adc
V) V5 raw adc
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For Firmware 2.9 and 3.0
The default soil moisture calibration is called GENERAL or GEN. The GENERAL soil calibration has been
heavily tested, widely used in many soil types, and is suitable for most agricultural and mineral soils consisting
of sand, silt and clay. It is recommended to keep the HydraProbe set to the GENERAL soil calibration. Other
factory calibrations include O (organic soil), and R (Rock wool). A custom calibration can be entered using either
CUS 1 or KUS 2 modes. In CUS1 Mode, the user can enter four coefficients for a 3rd order polynomial and in
KUS 2 Mode, the user may select two coefficients for a semi-linear square root formula.
The calibrations curves are polynomials that calculate the soil moisture from the real dielectric permittivity. Soil
moisture calibrations will typically take one of two different general formulas. There are two general formulas
will mathematically have the appearance of equation [A1] or [A2]
Where q is moisture, εr is the real dielectric permittivity, and A, B, C, and D are coefficients. This procedure will
allow the user to select their A, B, C, and D values for equations [A1] and [A2].
A custom calibration or a statistical data validation for an existing soil moisture calibration is labor intensive. The
user will need to experimentally solve equation [1] or [2] from data obtained from the soil. Gravimetric soil
moisture values will need to be obtained for a range of soil moisture conditions. The volumetric soil moisture
value will need to be calculated from the gravimetric soil moisture values. Gravimetric soil moistures need to be
converted to volumetric values with either the dry bulk density of the soil or the know volume of the soil sample.
The user will then need to mathematically curve-fit one of the two polynomials using the real dielectric
permittivity and the volumetric soil moisture values for the range. The relationship between volumetric soil
moisture and gravimetric soil moisture is described by equation [A3].
%
𝜃A = 𝜃B % & [A3]
C
The coefficients for equations [A1] and [A2] can be programmed into the firmware of the digital HydraProbe.
Below is a procedure for programming a custom calibration into an RS485 and SDI-12 HydraProbe
Development of a new calibration involves collecting soil samples and drying them down in a gravimetric
analyses. Great care must be taken to obtain data points that are representative of the field conditions. It is
recommended to first post process the new calibration and compare it to the General factory calibration for a
period of time before programming it onto the sensor. It is also recommended to log the real dielectric permittivity
(SDI-12 parameter K or #6 on T0 for RS485) so that new calibrations can be applied to the data set.
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Calibration Formula A B C D
G A2 0.109 -0.179 NA NA
O A1, -0.02134 0.013148 0 0
R A1, -0.02134 0.013148 0 0
C (CUS1) A1 0 0.0224 -0.00047 0.00000514
K (KUS2) A2 0.109 -0.179 NA NA
Table C2. Coefficients for factory calibrations.
Note that the General (G) calibration was published in the Vadose Zone Journal (Seyfried 2005),
The default coefficients for Custom 1 are a general soil moisture calibration published in the Soil Science Society
of America Journal (Logsdon 2010). The O and R calibration coefficients are based on gravimetric analysis of
common samples.
Note: It is recommended to first post process a new calibration for a period of time before programming the
coefficients into sensors. It is also recommended to log the real dielectric permittivity (Parameter K on T0) so
that a data set can be recalibrated if needed.
Soil Type
Description: Gets/sets the probe soil type.
Access Level: Read/Write
Read Addresses: Broadcast, Exact
Read Command: <addr>ST=?<CR><LF>
Read Response: <addr><CR><LF>
Write Addresses: Broadcast, Exact, Wildcard
Write Command: <addr>ST=<soil><CR><LF> Where <Soil> can be G, O, R, C
or K
Write Response: <addr><soil><CR><LF> (No response for wildcard address)
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For Firmware 2.9 and 3.0
Example 1(RS485)
To program a probe with an address of 000 to use the KUSTOM 2 formula, you would enter this command:
000ST=K. The KUSTOM 2 formula uses two coefficients, so we will need to assign values to them. To assign a
value of 0.3 the first coefficient and a value of -0.6 to the second, we would enter these two commands:
000XA=0.3
000XB=-0.6
To verify that your setting have been programmed into the probe, enter the following query commands. The probe
should respond as shown in boldface:
000ST=?
000K
000XA=?
000+00.30000001
000XB=?
000-00.60000002
The values that the probe returns are slightly different than the values you entered. This is an artifact of the
conversion from decimal to binary and then back again. The difference, for our purposes, is negligible.
Note: It is recommended to first post process a new calibration for a period of time before programming the
coefficients into sensors. It is also recommended to log the real dielectric permittivity (Parameter K on “aM!” or
“aC!”) so that a data set can be recalibrated if needed.
<Soil> Single ASCII character representing the soil type. The Default is G.
G General Soil calibration for most soils.
O Organic Soil Calibration for highly Organic Soils.
R Rockwool or other inorganic growth media.
C Custom 1, for a third-order polynomial. Equation [A1].
K Kustom 2, for a semi-linear square-root formula. Equation [A2].
Table C4 and C5 shows the SDI-12 commands for changing or creating different calibrations. In order to
communicate in SDI-12, the user will need to have a data logger that has an SDI-12 Transparent Mode. All of
these commands must be entered while in an SDI-12 transparent mode.
59
For Firmware 2.9 and 3.0
Several commands are needed to program the HydraProbe to use a Custom Soil Setting. They are "XS" for setting
the soil type and a separate "XY" command for setting each coefficient. All commands are preceded by the probe's
address.
For example, to program a probe with an address of 0 to use the CUSTOM 1 formula, you would enter this
command:
0XSC!
0SC=CUS1
The CUSTOM 1 formula uses four coefficients, so we will need to assign the values to them. To assign a value
of -10.0 to the first coefficient, a value of 5.0 to the second, 0.3 to the third and 0.0005 to the fourth we would
enter these commands. The probes responses are shown in boldface.
0XYA-10.0!
0-10.00000000
0XYB5.0!
0+05.00000000
0XYC0.3!
0+00.30000001
0XYD0.0005!
0+00.00050000
To verify that your settings have been programmed into the probe, enter the following query commands. The
probe should respond as shown in boldface:
0XS!
0SC=CUS1
0XYA!
0-10.00000000
0XYB!
0+05.00000000
0XYC!
0+00.30000001
0XYD!
0+00.00050000
The values that the probe returns are slightly different than the values you entered. This is an artifact of the
conversion from decimal to binary and then back again. The difference, for our purposes, is negligible.
You can use the SDI-12 D commands to take current reading. For example the command
0M!
0D0!
Will return the first three reading from the first three parameters. 0D1! Will return the 2nd three readings and so
forth.
60
For Firmware 2.9 and 3.0
61
For Firmware 2.9 and 3.0
E. Appendix - References
Blonquist, J. M., Jr., S. B. Jones, D.A. Robinson,. Standardizing Charaterization of Electromagnetic Water
Content Sensors: Part 2. Evaluation of Seven Sensing Systems. Vadose Zone J. 4:1059-1069 (2005)
Birkeland, P. W. Soils and Geomorphology 3rd Ed. Oxford University Press 1999
Campbell, J. E. 1990. Dielectric Properties and Influence of Conductivity in Soils at One to Fifty Megahertz. Soil
Sci. Soc. Am. J. 54:332-341.
Corwin, D. L., S. M. Lesch. 2003. Application of Soil Electrical Conductivity to Precision Agriculture: Theory
and Principles, and Guidelines. Agron. J. 95:455-471 (2003)
Crop and Evapotranspiration-Guidelines for Computing Crop Water Retirements Irrigation and Drainage FAO-
56, Food and Agriculture Organization of the United Nations, (1988).
Hamed, Y., M. Person, and R. Berndton. 2003. Soil Solution Electrical Conductivity Measurements Using
Different Dielectric Techniques. Soil Sci. Soc. AM. J. 67 No.4: 1071-1078
Jones, S. B., J. M. Blonquist, Jr., D.A. Robinson, V. Philip Rasmussen, and D. Or. Standardizing Charaterization
of Electromagnetic Water Content Sensors: Part 1. Methodology. Vadose Zone J. 4:1028-1058 (2005)
Lee, J. H., M. H. Oh, J. Park, S. H. Lee, K. H. Ahn, Dielectric dispersion characteristics of sand contaminated be
heavy metal, landfill leachates and BTEX (02-104) J. Hazardous Materials B105 (2003) pp. 83-102.
Logsdon, S. D., T. R. Green, M. Seyfried, S. R. Evett, and J. Bonta, Hydra Probe and Twelve-Wire Probe
Comparisons on Fluids and Cores. Soil Sci. Soc. AM. Vol. 74 No. 1, 2010.
Seyfried, M. S. and M. D. Murdock. 2004. Measurement of Soil Water Content with a 50-MHz Soil Dielectric
Sensor. Soil Sci. Soc. Am. J. 68:394-403.
Seyfried, M. S., L. E. Grant, = E. Du, and K. Humes. 2005. Dielectric Loss and Calibration of the HydraProbe
Soil Water Sensor. Vadose Zone Journal 4:1070-1079 (2005)
Seyfried, M.S., and L.E.Grant. 2007. Temperature Effects on soil dielectric properties measured at 50MHz.
Vadose Zone J. 6:759-765. (2007)
Topp, G. C., J. L. Davis, and A. P. Annan. 1980. Electromagnetic Determination of Soil Water Content:
Measurement in Coaxial Transmission Line. Water Resources. Res. 16:574-582
Whalley, W. R. 1993. Considerations on the use of time-domain reflectometry (TDR) for measuring soil water
content. J. Soil Sci. 44:1-9.
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For Firmware 2.9 and 3.0
F. Appendix – CE Compliance
Declaration of Conformity
The Manufacturer of the Products covered by this Declaration is
EN61326-1:2006
Electrical requirements for measurement, control and laboratory use EMC
requirements
Class A equipment – Conducted Emissions and Radiated Emissions
The technical documentation required to demonstrate that the products meet the requirements
of the EMC directive has been compiled and is available for inspection by the relevant
enforcement authorities.
63