Ritika Kinetics
Ritika Kinetics
HISTORY
ENZYME KINETICS
MICHAELIS MENTEN APPROACH
STEADY STATE EQUATION
EFFECTS OF INHIBITORS
MODIFICATION TO MM EQUATION
FACTORS EFFECTING ENZYME KINETICS
REFERENCES
An enzyme is a biocatalyst that increase the rate
of chemical reaction without itself being
changed in the overall process.
k1 k2
E + S ES P+E
k-1
• Here E, S, ES and P symbolize the enzyme, substrate,
enzyme-substrate complex and products
• According to this model
• When the substrate concentration becomes high enough
to entirely convert the enzyme to the ES form, the
second step of the reaction becomes rate limiting step.
• The overall reaction rate becomes insensitive to further
increase in substrate concentration.
d[P]
v = =k [ES ]
dt 2
• The overall rate of production of [ES] – Difference between the
rates of elementary reactions leading to its appearance and
those resulting in its disappearance.
K1
k 2
E+S ES ⎯⎯→P + E
K-1
At this point, an assumption is required to achieve an analytical
solution.
The rapid equilibrium assumption
•Michaelis - Menten Approach.
•The steady-state assumption.
•Briggs and Haldane Approach.
K1 k 2
E+S ES ⎯⎯→P + E
K-1
The rate of formation of [ES] complex at
any time ‘t’
t = K +1 [E] [S]
Also at time ‘t’rate of breakdown of [ES]
back to [E] and [S].
t = K-1 [ES]
As per MM assumption equilibrium
K+1 [E] [S] = K-1 [ES]
[E] [S]/ [ES] = K-1 /K+1 =Km (1)
Km is the dissociation constant of [ES]
Total enzyme present [Et] must be the sum of [E]
and [ES]
[E] = [E]t - [ES] (2)
• Since the enzyme is not consumed, the
conservation equation on the enzyme yields
[E] = [Et] −[ES ]
• Substituting [E] in the equation 1 with
enzyme mass conservation equation
([Et ] −[ES ])[S]
Km =
[ES]
([Et] −[ES ])[S]
[ES ] ==
Km
[ES ]Km == [Et ][S ] −[ES ][S ]
[Et ][S]
[ES ] ==
Km +[S ]
Then the rate of appearance of product 'v' is
proportional to the concentration of the [ES]
V= Km × [ES]
The maximum reaction rate Vmax will be occur
at a point where total enzyme bound to the
substrate. Then Vmax,
Vmax = Km x [Et]
V/ Vmax = Km X [Et]
V =Vmax [S]
Km + [S]
The interpretation of Michaelis Menten
model were refined by Briggs and Haldane by
an assumption termed the steady state
assumption.
V = km × [ES]
The maximum reaction rate (Vmax) will occur at a point where the total
enzyme concentration [Et] is bound to the substrate [S] then the maximum
concentration of [ES] complex will be equal to the total enzyme concentration.
Vmax = km × [Et]
V = [ES] = [S]
Vmax [ Et] [S] + km
V = Vmax [S]
km + [S]
K m + [S ]
2. Breakdown of ES to reform E and S
• The direct measurement of the numeric value of Vmax
and therefore the calculation of Kmoften requires
impractically high concentrations of substrate to
achieve saturating conditions
1 K 1 1
• Lineweaver-Burk Equation =( m ) +
v 0 Vmax [S] Vmax
• At the optimum pH of 7,
around 90% of both groups
are present in the active form
• at higher and lower values,
one or the other of the
groups increasingly passes
into the inactive state.
The temperature dependency of enzymatic
activity is usually asymmetric.
With increasing temperature the increased
thermal movement of molecules initially leads
to a rate acceleration.
At a certain temperature, the enzyme then
becomes unstable, and its activity is lost
within a narrow temperature difference as
result of denaturation.
Jeremy M. Berg, John L.Tymaczko, Lubert
Stryer, 2002, Biochemistry, fifth edition, New
York, Printed in the United States of America.
Pranav Kumar, Usha Mina, 2017, Life Science
fundamentals and practice I, sixth edition, New
Delhi, India, Pathfinder publication.
Micheal M. Cox, David L. Nelson, Albert L.
Lehniger, 1970, Principles of biochemistry,
fifth edition, Replica press Pvt.Ltd.
Thank you…