Coordination Chemistry "Bachelor of Science": A Project Report On
Coordination Chemistry "Bachelor of Science": A Project Report On
Project Report
on
COORDINATION CHEMISTRY
Parꢀal fulfilment of requirement for the award of degree of
“Bachelor of Science”
In
‘Chemistry’
Session 2023-2024
Submiꢁed to Submiꢁed by
1
CERTIFICATE
2
ACKNOWLEDGEMENT
It is my pleasure to be indebted to venous people, who directly
or indirectly contributed on the development of this work and
who influenced my thinking, behaviour, and during the course
of study.
I am thankful to Prof. (Dr.) B.K. Singh (Director, SOS), whole
Chemistry Department for support, co-operation and
Motivation provided to me during the project for constant
inspiration, presence and blessings.
I am thankful to Dr. Pawan Kumar Shukla (Project Guide)
for his support, co-operation and motivation provided to me
during the project training for constant inspiration, presence and
blessings.
Lastly, I would like to thank the almighty and my parents for
moral support and my friends with whom I shared my day-to-
day experience and received lots of suggestions that improved
my quality of work.
Jatin Bansal
Date:
3
Coordination Chemistry: Bonding, Spectra, and Magnetism
Read through the top of paragraph on your own. This is a description of the beginnings of
modern
inorganic chemistry. It is mostly history, but there is some interesting chemistry in there as well.
You will be able to see the logic of how Alfred Werner was able to figure out the structures of
coordination complex - a molecule or ion in which a metal atom is covalently bound to one
or more ligands.
ligand - a molecule, atom, or ion that is covalently bound in a coordination complex. Nearly
coordinate covalent bond – a covalent bond that results from one of the atoms providing all
formal charges suggest that each bond should place a -1 charge on the M2+.
this would yield a formal charge of -4 on the metal of an octahedral complex. How can this be?
As you would probably guess, since donor atoms on the ligand are more electronegative than the
metal, they do not share their electron density equally. Calculations suggest that the ligands help
2
to lower the charge on the metal from its oxidation state, by spreading it out over several atoms,
but not by so much as to place significant negative charge on the electropositive metal center. The
closer the oxidation number of a metal is to zero, the closer will its actual charge be to zero. As
you can see in the example for Be2+ and Al,3+the actual charges wind up very near zero.
For OsO4, where the oxidation state is +8 the actual charge on osmium may be as high as only +1
to +2. As a result, metal-ligand bonds are typically about 50% covalent in character and 50%
ionic.
A second way to remove electron density from a metal center is called back-bonding. If a
metal atom has electron density in its d-orbitals, the electron density may be transferred to a ligand
through the latter’s orbitals, e.g. CO.
:C O * orbital
This feeding of electron density into * orbitals on the ligand affects bond lengths in the
complex. The M-C bond will shorten, while the C-O bond will lengthen. This can be easily seen
The more electron rich a metal is, the more the right-hand form contributes to the actual structure.
We can see this empirically through crystal structures and infrared spectroscopy (vide infra).
This is a relatively simplistic theory that does an amazingly good job of making predictions
about complexes. Unfortunately, most of its underlying assumptions are wrong, even if their
application works. It turns out the errors just about cancel each other out.
Crystal field theory treats the metal atom as a point charge with five d orbitals. The ligands
are also treated as negative point charges. Thus, the bonds are thought of as purely ionic in
character. The book shows representations of the d orbitals on pp. 396-97. You should commit
these to memory. There is also discussion about the fact that mathematically one can come up
3
with 6 equations to describe d orbitals. This should be a bit of a review from earlier in the semester.
Recall that the dxy, dxz, d yz, and d orbitals all look the same because mathematically the only
x2-y2
difference between them is their orientation in space. The dz2 orbital looks different because it is
the average of the two remaining mathematical functions. The “doughnut” traditionally shown in
general chemistry texts is inaccurate. The shape is more akin to a teardrop rotated around the
nucleus with the tip pointing towards the metal. The averaging causes the lobes along the z-axis
to be larger (i.e. thicker) than the torus. Henceforth, the d orbitals will be designated by their
arrange the ligands? If you think “VSEPR,” they lie on opposite ends of the coordinate axes, at
an infinite distance from the origin. The transition metal ion resides at the origin.
Where is the transition metal d electron? It spends 1/5 of the time in each orbital in the absence
of an outside interaction. What happens as we bring the ligands towards the metal ion? Two
opposing things: (i) M+-ligand attraction lowers the energy of d-orbitals and (ii) electron-electron
repulsion raises the energy of the d-orbitals. Let’s start with point (ii).
As the ligands approach the ion, their electrons repel the metal d electron. Repulsion is
greatest in orbitals lying along the x, y, and z axes (z2, x2-y2) and less in the orbitals directed
between the axes (xy, xz, yz). Thus, the orbitals are split in relative energies.
As you might guess, the electrons in all orbitals are repelled; so all orbitals increase in energy.
When factor (i) is added in, all orbitals lower in energy. Now let’s step back for a minute. Instead
of 6 discreet ligands, imagine the pairs of electrons as smeared out in a spherical shell around the
metal atom. If the shell were contracted all 5 orbitals would increase in energy at exact equal rates.
Now, the 6 ligands described above are distributed spherically. (i.e. They come as close as 6
ligands can to simulating a spherical distribution.) As a result, the average energy of the d orbitals
in the real complex is the same as the average energy of the d orbitals in the hypothetical complex
4
So what does this mean? When the metal-ligand electrostatic attractions are figured in, the
xy, xz, and yz orbitals go down in energy relative to the average and the z 2 and x 2-y 2 go up.
Importantly, the total energy decrease of the xy, xz, and yz orbitals exactly equals the total energy
increase of the z2 and x2-y2. Individually, xy, xz, and yz orbitals drop below the average by 2/5
O
and z2 and x2-y2 increase by 3/5 O. This can be seen pictorially as:
g 3 O
O 5
2 O
5
2g
Finally, these groups of degenerate orbitals are “named” t 2g for the lower energy orbitals and
eg for the higher energy orbitals. The labels come from group theory. To generate the labels, begin
with the molecular point group Oh. Since there are three equal energy orbitals, they must belong
to a “T” irreducible representation (T 1g, T 2g, T 1u, and T 2u exist for O h). Then, treating the three
orbitals as a group, perform the various symmetry operations and keep track of the results. They
will generate a set of characters identical to one of the irreducible representations, in this case t 2g.
Now that we see that the d orbitals split in energy and why they do so, we need to explore
how the orbitals fill. All of the examples in this section possess an octahedral coordination
geometry.
In the case of a one electron (d1) atom or ion, the answer is simple: the electron drops into the
t2g set. This electron is more stable than in the free ion by 0.4O. This stabilization is called the
crystal field stabilization energy (CFSE). O is measured from the electronic spectrum (UV-
of 0.8O and 1.2O, respectively. So far this is just like filling the 2p orbitals from boron through
What happens with d4? The electron may go into either the t2g or e g set depending on the
magnitude of O. We will talk about this more later, but, in a nutshell, ligands with strong
associations/attractions to metal ions have larger Os than those with weaker associations. We’ll
discuss the nature of these associations shortly (Factors Affecting the Magnitude of O). If O is
greater than the spin pairing energy, P, the electron goes into the t 2gset. Conversely if P Othe
electron goes into the eg. O P is called the strong field or low spin case and P O is the weak
CFSE = 0.4O. For d7, CFSE = 0.8O. Let’s stop here and go back to the low spin case. (It merges
with the high spin configuration at d8.)
a result that is a little surprising at first glance. It’s CFSE = 2.4O - 2P. Why not -3P? For the
same reason you do not subtract 1P from the high-spin d6 case. Remember we are measuring
CFSE relative to the unsplit case. In the unsplit case d6 would have one spin paired anyway, so
only the additional paired spins are counted. (The book is in error here.) For d7 CFSE = 1.8O -
P (6 *0.4 O - 1 *0.6 O).
Once eight electrons are placed in the orbitals, the low-spin and high-spin configurations are
identical and the labels no longer are relevant. Thus, high and low spin applies only to d4-d7. In
d8 complexes CFSE = 1.2 O, d9: CFSE = 0 O, d10: CFSE = 0.
Tetrahedral Symmetry
We can use the same approach here as for octahedral symmetry. The ligands are placed on
alternating corners of a cube and are then brought in towards the metal ion. If the coordination
axes are passed through the faces of the cube, then the incoming ligands will interact more strongly
with the xy, xz, and yz orbitals than z2 and x2-y2 orbitals. Thus, the splitting will be reversed.
6
2 2
5 T
T
3 T
note the changes in labels
5
e
Note that because the point group is now Td, the labels have changed slightly. The presence
of only four ligands causes to be smaller than under almost all conditions. That the ligands
T O
do not exactly align with the orbitals, also reduces the value of T versus O. This causes
The book mentions the Jahn-Teller effect here, we both will put it off for a while. The easiest
way to think about square complexes is as octahedra with one pair of trans ligands removed.
Mathematically, it is easiest to remove the two ligands on the z-axis. When this happens, orbitals
with a z component drop in energy. To maintain the barycenter, those without a z component
xy
2
z
xz, yz
spherical octahedral tetragonal
coordination coordination coordination
The spacing of energy gaps is somewhat different for square planar complexes than for the
two previous cases. One might conclude from the discussion on tetrahedral complexes that the
top-to-bottom gap would be small because there are only 4 ligands. That is only partially true.
For the four orbitals that don’t point at the ligands (xy, xz, yz, z2) the splitting is indeed small (see
Table 11.5, p. 405 for details). The x2-y2 orbital, however, bears the full brunt of the repulsion in
the complex and is therefore elevated in energy by a significant amount. Furthermore, since there
are now four energy levels the gaps between any two tend to be fairly small.
larger will be .
Metal ion oxidation state - increases with oxidation state, higher charged ions draw ligands
in closer.
Nature of Mn+ - increases down a group for Mn+ with constant charge. Probably because
there is more overlap with larger d-orbitals. (Note that this trend is opposite
discussed previously
Nature of Ligands - memorize the basic outline of the spectrochemical series I- Br- Cl-
Note this is the reverse from what is expected in crystal field theory. We
The notion that metal-ligand interactions are purely ionic is clearly inaccurate (c.f.
electroneutrality, vide supra). In fact, for most ligands the interactions are primarily covalent (e.g.
neutral ligands) and there is significant experimental evidence consistent with this assertion. In
fact, the spectrochemical series is essentially backwards from what it should be for a reasonable
prediction based on the assumptions of crystal field theory. The book discusses this briefly. Read
it on your own.
Octahedral Complexes
The MO diagram of an octahedral complex probably seems like it would be very difficult to
construct. In fact, it is not so hard to generate. The first question to ask is: what orbitals are
involved? The 6 ligand donors and the 3d, 4s, and 4p orbitals on the metal (this is for a first-
We’ve already seen that the metal d orbitals can be broken into e g and t 2g sets. The 4s orbital is
spherically symmetrical and will be described by the A 1g irreducible representation (with a sphere
any operation will give back a sphere, therefore all characters in the reversible representation will
be 1). Given the high symmetry of an octahedron, it’s a good bet that the p orbitals would be
treated together. They yield a T 1u irreducible representation (think a sphere with one half-positive,
the other half negative). The lobes on the ligands used to donate to the metal may have positive
or negative signs on the wave function. These signs are used to make up the group orbitals. The
ligands generate a reducible representation that can be broken into A 1g, E g, and T 1u irreducible
ligands
eg
1u
1g
Note here the t2g set does not change in energy. This is because there is no net bonding with
the ligand orbitals (see p. 415, Fig. 17). These are non-bonding orbitals.
When filling the MO diagram remember the ligands will contribute 12 electrons (6*2e-) so the
a1g, t1u, and eg sets will always be filled. Filling of the t2g and eg* will depend on the number of
the metal d electrons. A result is that the same final d orbital pattern is generated as existed for
crystal field theory. The crystal field e g orbitals become e g* orbitals in molecular orbital theory.
Read this section on your own. You are not required to memorize these MO diagrams, but
square planar complexes. The MO treatment for these systems is very similar to what is observed
examples of each in Table 11 on p. 421. The p -d interaction involves ligand-to-metal donation
while the other three are metal-to-ligand donations. -bonds will involve the t2g set, not the e g*.
This is because the eg* orbitals point directly at the ligands and are set up for overlap. See
pictures on p. 420.
The direction of electron donation and the energy levels of ligand -bonding orbitals will have
a pronounced effect on molecules. We will consider a molecule with six -donor ligands (e.g.
e*
e* O g
g
t2 *
g
t2g
t
2g
2g
When the MOs form the ligand p electrons fill the t2g orbitals, thus metal t 2g electrons go into the
t2g* MOs. The result of this type of interaction is a small O.
M(CO)6: The CO * orbitals are empty and are high in energy (remember CO bond energy).
t 2g*
2g
e*
e* g
g
O
2g
2g
Since the CO * orbitals are empty, the t 2gMO is filled with metal t 2gelectrons and promotion is
10
So what evidence is there for -bonding (i.e. what do we look for)? We begin by asking what
would the interaction look like without -bonding? Then, what happens with full -bonding:
M-L M=L
Since the bonding between metal and ligand changes between these forms, bonding within the
ligand must change (see the figures on p. 2 of these notes). If electron density is fed into a or
orbital on the metal, a bond within the ligand will be weakened. The strongest evidence for -
be and the more CO will resemble C=O. The difference in CO and C=O bond lengths is about
0.1 Å and should be useable for quantification. Unfortunately, this has not been observed. In
Cr-C bond lengths should be the same. If it does occur, then the bond lengths should be shorter in
Cr(CO)5(PMe3). Why? Two reasons: PMe 3 is at best a very poor -acceptor so only 5 COs are
competing for electron density from the metal, not 6; and PR3 is a very good donor, CO is not.
Thus, the Cr has more electron density to share with fewer acceptors. One other trend is expected.
The Cr-C(O) bond trans to PR3should be shorter than those cis. This is because the trans CO will
bind to the same d-orbital as the PR3 and the effect will be greatest there. As can be seen in Table
Infrared Spectroscopy
Evidence for C=O character is most clearly seen in IR spectroscopy. (CO) for CO is about
-
2150 cm-1, while in R2C=O (C=O) is about 1700 cm 1. Thus, the greater the extent of
backbonding the lower the expected (CO). This is seen dramatically for two series of complexes
11
M(CO)6n+/- and M(CO)4n+/- in Table 13 on p. 428. This can also be seen when a CO is substituted
for by another ligand as seen in crystallography. The only problem with using this technique is
that the CO stretching band is almost always split into several components making interpretation
difficult. Read the section in the book on IRs of substituted complexes. Skip the subsection on
photoelectron spectroscopy .
The sections we just passed over, discussed how energy levels are affected by having different
ligands bound to the central metal atom or ion. As I said earlier, this is more complex than we need
to get into, however energy level distortions can occur even if the ligands are all the same.
The Jahn-Teller theorem predicts these distortions. It states that for a non-linear molecule in
a non-degenerate state, the molecule must distort such that the symmetry of the molecule is
lowered, the degeneracy is removed, and the energy of the molecule is lowered.
So what does this mean? First, a non-degenerate state is one in which all sets of orbitals are
not full, empty, or half-full (e.g. 1 or 2 electrons in t 2g or 1 electron in e g*). Let's assume for a
moment you have 1 electron in an eg set. That electron spends 50% of the time in the z2 and 50%
of the time in the x2-y2. Now what would happen if the two z-axis ligands were pulled slightly
away from the metal? The x and y axis ligands would be pulled in a little closer to replace lost
electron density. With the z2 ligands further away the z2 drops in energy. The x2-y2 will rise in
energy by an equal amount because its ligands are drawn closer. The reverse may also happen.
That is: z ligands move in and x, y ligands move out. There will also be an effect on the t 2g set
z2
x2-y2
x2-y2
z2 eg*
xz, yz
xy
2 xy
xz, yz g
12
Note the average energy of each split set equals the energy of the unsplit set. These splittings
are quite small and so do not affect pairings. Altering spin pairings could conceivably happen in
a d4 case where to avoid spin pairing energy the fourth electron moved into a lowered eg* orbital.
However, the square planar geometry can be viewed as an extreme Jahn-Teller distortion with the
Finally, the number of electrons in a t 2g set will govern the type of distortion: 1e -, 4e - (LS),
or 6e- (HS) z out and 2e- , 5e- (LS), or 7e- (HS) z in. What about the eg * set? This brings us to an
important point about the Jahn-Teller theorem. It tells us neither the type, nor the size of the
distortion, only that it will occur with the proviso that the center of symmetry will remain. For the
The book briefly discusses some experimental evidence for Jahn-Teller distortions. Read it.
The previous discussion centered on d-d transitions. That is, transferring an electron from
one metal d based orbital to another (e.g. t2g eg*). But other types of electron promotions can
effectively moved from the metal to the ligands. This is called a metal-to-ligand charge transfer
LMCT are favored for metals in high oxidation states that are bound to electron-rich, low
electronegativity ligands. MLCT is favored for electron metals bound to ligands with low-lying
orbitals (e.g. CO, heteroarenes (e.g. pyridine)). These complexes are frequently highly colored.
promoted to a high-energy excited state by shining light on the compound, which then transfers
the electron to another species. Following this, two things can happen: (i) the electron can return
to the first molecule or (ii) if either molecule undergoes some irreversible rearrangement the
13
power can be varied by promoting into different energy levels. That is, the higher the electron is
promoted, the more powerful the complex is as a reductant and (ii) the reaction can easily be