Optical Design of Microscopes (SPIE Tutorial Text Vol. TT88) (SPIE Tutorial Texts) (PDFDrive)
Optical Design of Microscopes (SPIE Tutorial Text Vol. TT88) (SPIE Tutorial Texts) (PDFDrive)
• Analysis and Evaluation of Sampled Imaging Systems, Richard H. Vollmerhausen, Donald Reago, Ronald
Driggers, Vol. TT87
• Nanotechnology A Crash Course, Raúl J. Martin-Palma and Akhlesh Lakhtakia, Vol. TT86
• Direct Detection LADAR Systems, Richard Richmond, Stephen Cain, Vol. TT85
• Optical Design Applying the Fundamentals, Max J. Riedl, Vol. TT84
• Infrared Optics and Zoom Lenses, Second Edition, Allen Mann, Vol. TT83
• Optical Engineering Fundamentals, Second Edition, Bruce H. Walker, Vol. TT82
• Fundamentals of Polarimetric Remote Sensing, John Schott, Vol. TT81
• Fundamentals of Photonics, Chandra Roychoudhuri, Vol. TT79
• Radiation Thermometry Fundamentals and Applications in the Petrochemical Industry, Peter Saunders,
Vol. TT78
• Matrix Methods for Optical Layout, Gerhard Kloos, Vol. TT77
• Fundamentals of Infrared Detector Materials, Michael A. Kinch, Vol. TT76
• Practical Applications of Infrared Thermal Sensing and Imaging Equipment, Third Edition, Herbert
Kaplan, Vol. TT75
• Bioluminescence for Food and Environmental Microbiological Safety, Lubov Y. Brovko, Vol. TT74
• Introduction to Image Stabilization, Scott W. Teare, Sergio R. Restaino, Vol. TT73
• Logic-based Nonlinear Image Processing, Stephen Marshall, Vol. TT72
• The Physics and Engineering of Solid State Lasers, Yehoshua Kalisky, Vol. TT71
• Thermal Infrared Characterization of Ground Targets and Backgrounds, Second Edition, Pieter A. Jacobs,
Vol. TT70
• Introduction to Confocal Fluorescence Microscopy, Michiel Müller, Vol. TT69
• Artificial Neural Networks An Introduction, Kevin L. Priddy and Paul E. Keller, Vol. TT68
• Basics of Code Division Multiple Access (CDMA), Raghuveer Rao and Sohail Dianat, Vol. TT67
• Optical Imaging in Projection Microlithography, Alfred Kwok-Kit Wong, Vol. TT66
• Metrics for High-Quality Specular Surfaces, Lionel R. Baker, Vol. TT65
• Field Mathematics for Electromagnetics, Photonics, and Materials Science, Bernard Maxum, Vol. TT64
• High-Fidelity Medical Imaging Displays, Aldo Badano, Michael J. Flynn, and Jerzy Kanicki, Vol. TT63
• Diffractive Optics–Design, Fabrication, and Test, Donald C. O’Shea, Thomas J. Suleski, Alan D.
Kathman, and Dennis W. Prather, Vol. TT62
• Fourier-Transform Spectroscopy Instrumentation Engineering, Vidi Saptari, Vol. TT61
• The Power- and Energy-Handling Capability of Optical Materials, Components, and Systems, Roger M.
Wood, Vol. TT60
• Hands-on Morphological Image Processing, Edward R. Dougherty, Roberto A. Lotufo, Vol. TT59
• Integrated Optomechanical Analysis, Keith B. Doyle, Victor L. Genberg, Gregory J. Michels, Vol. TT58
• Thin-Film Design Modulated Thickness and Other Stopband Design Methods, Bruce Perilloux, Vol. TT57
• Optische Grundlagen für Infrarotsysteme, Max J. Riedl, Vol. TT56
• An Engineering Introduction to Biotechnology, J. Patrick Fitch, Vol. TT55
• Image Performance in CRT Displays, Kenneth Compton, Vol. TT54
• Introduction to Laser Diode-Pumped Solid State Lasers, Richard Scheps, Vol. TT53
• Modulation Transfer Function in Optical and Electro-Optical Systems, Glenn D. Boreman, Vol. TT52
• Uncooled Thermal Imaging Arrays, Systems, and Applications, Paul W. Kruse, Vol. TT51
• Fundamentals of Antennas, Christos G. Christodoulou and Parveen Wahid, Vol. TT50
• Basics of Spectroscopy, David W. Ball, Vol. TT49
• Optical Design Fundamentals for Infrared Systems, Second Edition, Max J. Riedl, Vol. TT48
• Resolution Enhancement Techniques in Optical Lithography, Alfred Kwok-Kit Wong, Vol. TT47
• Copper Interconnect Technology, Christoph Steinbrüchel and Barry L. Chin, Vol. TT46
• Optical Design for Visual Systems, Bruce H. Walker, Vol. TT45
George H. Seward
Seward, George.
Optical design of microscopes / George Seward.
p. cm. -- (Tutorial texts in optical engineering ; v. TT88)
ISBN 978-0-8194-8095-8
1. Microscopes. 2. Optics. I. Title.
QH211.S478 2010
681'.413--dc22
2010000660
Published by
SPIE
P.O. Box 10
Bellingham, Washington 98227-0010 USA
Phone: +1 360 676 3290
Fax: +1 360 647 1445
Email: [email protected]
www.spie.org
All rights reserved. No part of this publication may be reproduced or distributed in any form or by
any means without written permission of the publisher.
The content of this book reflects the work and thought of the author(s). Every effort has been made
to publish reliable and accurate information herein, but the publisher is not responsible for the
validity of the information or for any outcomes resulting from reliance thereon.
James A. Harrington
Rutgers University
Contents
Preface .................................................................................................... xiii
vii
viii Contents
Chapter 4 Aberrations / 27
4.1 Seidel Aberrations ............................................................................. 27
4.2 Chromatic Aberrations....................................................................... 29
4.3 Other Aberrations .............................................................................. 29
4.4 Aspheric Surfaces ............................................................................. 33
Chapter 6 Fluorescence / 53
6.1 Absorption Parameters...................................................................... 53
6.2 Electron States .................................................................................. 54
6.3 Energy Diagrams............................................................................... 55
6.4 Fluorophores ..................................................................................... 57
George H. Seward
March 2010
xiii
Chapter 1
Optical Design Concepts
1.1 A Value Proposition
A comprehensive optical design should yield both consistent manufacture and
maximum performance. Such features are critical to biological applications,
where the cost of consumables can be far greater than the cost of the optical
hardware. Maximum performance can reduce the magnitude of consumables on a
daily basis. Furthermore, a false negative can delay proper treatment of a critical
condition. Consistent manufacture builds credibility in a clinical test.
Sections 1.2 through 1.9 provide a review of essential optical design
concepts. Expertise within these concepts is developed through education and
practice. Perseverance is not a substitute for relevant expertise in optical design.
1
2 Chapter 1
ΝA M = n sin θ M , (1.1)
where n is the refractive index and θM is the angle of the marginal ray.i The
marginal ray is defined as a ray from the object point to the margin of the
aperture. The NA can decrease with field height, yielding less image brightness
at the field margin.
The marginal NA defines several important features of the lens system. The
spot diameter [Eq. (1.4)] depends on ΝA −M1 . The depth of focus depends on
ΝA −M2 [Eq. (1.8)]. The collection efficiency by solid angle roughly depends on
ΝA M2 [Eq. (8.11)]. The peak irradiance of a diffraction-limited spot depends on
ΝA M4 [Eq. (8.24)]. The NA is an essential metric for an optical instrument.
The paraxial NA is derived from the focal length f and entrance pupil
diameter φEnt:
φ Ent 1
ΝA P = = , (1.2)
2f 2F
where F is the f-number (f/#). The principal surface is a sphere with its center at
the focal point. The marginal NA can differ from the paraxial NA because
spherical aberration can bend marginal rays both too much or too little. The f/#
can inflate with field height, which yields less image brightness. The image-
space f/# may also inflate as the focal length grows with field position.
AΩ ≥ λ 2 , (1.3)
where A is the area of point spread, Ω is the solid angle of convergence, and λ is
the wavelength. The diffraction limit of the point spread is defined by the
minimum space-angle product.
A planar version of the space-angle product is
where d is the diameter of the Gaussian beam and NAG is the Gaussian NA. The
area of the Gaussian point spread doubles over the Rayleigh distance, which is
i
The term numerical aperture has the unique distinction of being a two-letter symbol that persists in
contrast to the more common practice of using a one-letter symbol in math and physics.
Optical Design Concepts 3
A0 λ
zR = = . (1.5)
λ Ω
d ΝA M = 1.22λ , (1.6)
λ
zR = . (1.8)
π ΝA 2M
1.8 Manufacturing
Surface quality is expressed in three common formats. Surface-form error
describes the deviation from the specified form; 50 nm is a typical specification
for surface-form error in optics for the visible spectrum. Surface imperfections
describe the size and number of digs, coating defects, and scratches (known as
“scratch/dig”). Surface imperfections must be extremely small when near the
object field. Surface texture defines the fine structure limits. The total integrated
scatter (TIS) of a surface is defined as
TIS = φ 2 , (1.10)
1.9 Assembly
Assembly procedures should state specific steps toward a measurable result.
Otherwise, performance may vary between units. Tools may be required for
qualification of subsystems, and subsystems should be qualified for installation
into larger assemblies. A facile assembly procedure is essential for consistent
production. After assembly, the system must be qualified. A standard specimen
should be specified for measurement by the instrument and may require
significant expense.
Chapter 2
Basic Microscope Concepts
2.1 Magnification
Magnification specifies the ratio of an image dimension to its object dimension.
Magnification is typically cited in one of three formats: axial magnification,
radial magnification, or angular magnification. Axial magnification defines the
ratio of an axial image shift to an axial object shift. Radial magnification defines
the ratio of an image height to the object height. Axial magnification is
proportional to the square of the radial magnification. Angular magnification
defines the ratio of the image angle to the object height or angle.
Several types of dimensions are employed in defining these magnifications:
an axial dimension is a distance along the optical axis; a radial dimension is a
distance across the optical axis, and may be linear or angular. A radial dimension
may be called lateral or transverse, and an axial dimension may be called
longitudinal.
In a microscope, the “magnification” can be both radial and angular. The
objective lens indicates a radial magnification for a real image, while an ocular
lens specifies an angular magnification for a virtual image. A microscope does
not typically specify an axial magnification, although it is an important
parameter, since the depth of focus is scaled by the axial magnification.
2.2 Accommodation
The human eye comprises a static lens of the cornea and a dynamic lens within
the ciliary muscle. The standard far point of human vision is infinity ∞, which
may be expressed as zero diopters of magnification. A standard eye should focus
on an object at 250 mm. This represents an addition of four diopters by the
compressed dynamic lens. Therefore, the standard near point sNP of human vision
is 250 mm, or four diopters of magnification. The process of dynamic focus
within this range (250 mm–∞) is called accommodation.
The standard optical power of the near point is defined as
1
φ NP = = 40 diopters , (2.1)
s NP
7
8 Chapter 2
where the optical distance of the standard near point is 250 mm. A diopter is a
reciprocal meter.
LT
(1 + M ) ≈ , (2.2)
f Obj
where LT is the length of the tube, and fObj is the focal length of the objective lens.
An objective barrel is normally marked with both tube length and magnification.
The magnification M drops the negative polarity of the radial magnification. The
prescription of an objective is tailored to a particular magnification. Insertion of
plano optics within the convergent rays of the tube can create significant
aberration and defocus.
Figure 2.1 Objective lens with a finite tube length. The tube defines a finite distance to the
image conjugate. The chief ray (CR) travels from the center of the lens stop (LS) to the
margin of the image.
Basic Microscope Concepts 9
Figure 2.2 Objective lens with infinity correction. The cardinal points along the optical axis
(OA) are front focal point (FFP), front principal plane (FPP), back principal plane (BPP),
and back focal point (BFP). The lens stop defines the marginal ray (MR) and lens-stop
diameter (LSD). Body (B) defines working distance (WD), flange (F), and flange distance
(FD).
φ LS
ΝA P = n sin θ LS = , (2.3)
2f
10 Chapter 2
where θLS is the angle of the lens stop, φLS is the diameter of the lens stop, and f is
the focal length. The marginal ray is defined by the center of the object field and
the margin of the lens stop.
fT
M Obj = , (2.4)
f Obj
where fT is the focal length of the tube lens and fObj is the focal length of the
objective lens. The magnification will certainly change if the focal length of the
tube lens is changed. The image at the back focal point of the tube-lens is both
real and inverted.
The ∞ correction of the tube lens permits insertion of plano optics without
incurring defocus or aberration. Multiple beamsplitters and filters can also be
inserted without issue. However, a warped beamsplitter is not a plano optic; the
optics must be flat within a specific tolerance.
The location of the lens stop determines the location of the chief ray within
the tube lens. Separation of rays by field within a tube lens enables selective
correction of off-axis aberrations. Typically, a tube lens may travel axially by
10% of its focal length without creating significant aberration. A smaller
allowance of 1% applies to lateral movement.
Figure 2.3 displays a tube lens in combination with an objective lens. The
lens stop is placed at the front focal point of the tube lens. If the lens stop is
considered an object, then the tube lens creates an infinitely distant image of the
lens stop. The distant lens stop defines a telecentric lens. A telecentric image
space is also indicated by an axial chief ray at the image. The object space is also
telecentric.
Figure 2.3 Objective lens (OL) with tube lens (TL). The objective lens has a back focal
point (Obj-BFP). The tube lens has a front focal point (TL-FFP), front principal plane (TL-
FPP), back principal plane (TL-BPP), and back focal point (TL-BFP). The chief ray travels
from the center of the lens stop to the margin of the image.
Basic Microscope Concepts 11
f Oc
φ Ex = φ LS , (2.5)
f Oc − ( f Oc + f T )
f Oc
φ Ex = φ LS . (2.6)
fT
The eye relief specifies the distance from the back of the ocular to the exit
pupil. Eye relief allows room for spectacles. Furthermore, an eye cup may reduce
contributions from ambient light.
As displayed in Fig. 2.4, an ocular creates an image of the lens stop. This
image defines an exit pupil at the back focal point of the ocular lens (see Table
2.1). The ocular lens also magnifies an image at its front focal point. The
magnification of an ∞-corrected ocular lens is specified as
φ Oc 250 mm
M Oc = = , (2.7)
φ NP f Oc
where φOc is the power of the ocular, φNP is the power of the standard near point
at 250 mm, and fOc is the focal length of the ocular lens.
Figure 2.4 Tube lens with an ocular lens. The ocular lens has a front focal point (Oc-FFP),
principal plane (Oc-PP), and back focal point. The exit pupil is located at the ocular back
focal point. The exit pupil (EP) is an image of the lens stop. The eye relief (ER) defines the
distance from the last surface to the exit pupil. The chief ray travels from the center of the
lens stop through the margin of the image to the center of the exit pupil.
Figure 2.5 Bright field at the center of a cell. The cell image is bright in the center of the
cell. The illumination lens stop (ILS) defines the convergence of illumination. The vision
lens stop (VLS) defines the collection of illumination. The background appears bright. The
rays are bent at the cell principal plane (CPP).
Basic Microscope Concepts 13
Figure 2.6 Bright field near the edge of a cell. The cell image is bright near the edge of the
cell. The illumination lens stop defines the convergence of illumination. The vision lens
stop defines the collection of illumination. The background appears bright.
Figure 2.7 Bright field in transition at the edge of a cell. The cell image is gray during the
transition to dark at the edge of the cell. Refraction by the cell directs light into the opaque
portion of the lens stop.
Figure 2.8 Bright field at the dark edge of a cell. The cell image is dark at the edge of the
cell. Refraction by the cell directs light into the opaque portion of the lens stop.
As the vision NA grows, a steeper portion of the cell wall is required for
sufficient deflection. Both of these linear dependencies are dependent on a thin-
lens model. Actual dependencies can be nonlinear.
The first-order resolution of a refractive object is dependent on NAI and
NAV. Reduction of NAI should reduce the total width of an edge of refraction.
However, the width of the dark portion also displays important dependencies on
diffraction.
λ
wD ∝ . (2.10)
ΝA V
cell refracts light into the open annulus of the vision lens stop, and the edge of
the cell appears bright.
Diffraction may also create bright features in a dark field. An edge diffracts
light through the lens stop with little dependence on NAI. A subpixel object may
create significant diffraction through the vision lens stop. Moreover, a dark-field
contrast may reveal small features that are not visible in the bright field.
Figure 2.9 Dark field at the center of a cell. The cell image is dark at the center of the cell.
The center of the vision lens stop blocks illumination in the background. The background
appears dark.
Figure 2.10 Dark field at the edge of a cell. The cell image is bright at the edge of the cell.
Refraction by the cell directs light into the clear portion of the vision lens stop. The clear
portion may be a partial or full annulus. A partial annulus may rotate about the optical axis.
Chapter 3
Basic Geometric Optics
3.1 Ray Tracing
A ray is a convenient representation of wave propagation. A ray represents the
normal to a wavefront. Geometric optics defines the transport of light through
simple geometric constructions of ray transmission and reflection. Snell’s law is
the only consideration during transmission of a ray. Paraxial optics specifies
cardinal points without consideration of aberrations. Seidel aberrations indicate
defects through polynomials within ray-intercept plots. Comprehension of the
ensuing topics is essential for the effective design of an optical instrument.
It is important to remember that geometric optics is a simple model for more
complex wave propagation. Ignorance or negligence of physical optics frequently
yields a dysfunctional design. Ray tracing is a convenient and powerful tool;
however, it is not a complete description of an optical system.
Ordinarily, the nodal points are coincident with the principal points; however, if
the refractive index of the front is different from that of the back, then the nodal
points are separated from the principal points.
3.3 Stops
The aperture of a lens defines a stop, which restricts flow of light. A field stop
defines the spatial extent of an image field. A lens stop defines the angular extent
of the aperture at an image. Other stops might eliminate detrimental rays. The
word aperture can be ambiguously applied to a variety of thick-lens parameters;
therefore, it is important to reference an aperture by its proper name: field stop,
lens stop, or back focal plane. The marginal ray defines the angular extent of the
lens stop with respect to an image point. A chief ray travels through the margin
of the field stop and the center of the lens stop; it is frequently referenced in ray
calculations.
The marginal NA (NAM) is derived from the marginal ray of the lens stop as
ΝA M = n sin θM , (3.1)
where n is the refractive index and θM is the angle of the marginal ray. The NA
can be applied to several formats. The marginal ray can apply to the object, the
image, the focal point, or even the angular field of view. The NA must be
properly indentified by its location.
The f/# of a lens is another metric for stop size:
f
F= , (3.2)
φ EnP
where φEnP is the diameter of the entrance pupil as defined by an image of the
lens stop within object space. The f/# of a lens depends on an image at a focal
point. The f/# does not consistently correlate to NA, which is dependent on image
distance. The image-space f/# of a lens is
sI
FI = , (3.3)
φ ExP
where φExP is the diameter of the exit pupil, and sI is the image distance. As stated
earlier, the exit pupil is an image of the lens stop within image space.
Conversely, the entrance pupil is an image of the lens stop within object space.
As the image distance increases, the image-space f/# inflates, thus reducing the
brightness of subpixel objects.
The image-space f/# can inflate for several reasons. It doubles for a relay lens
with unity magnification and inflates at large field angles due to a reduction of
the solid angle with field position. A lens design might require f/# inflation for
Basic Geometric Optics 19
control of aberration. Spherical aberration might inflate the effective number for
subpixel objects. A low-f/# camera lens (such as f/1.4) should be carefully
examined before using it for low-light level applications. The image contrast will
not likely match calculations of the f/# stated by the vendor.
nO n I nO
+ = , (3.4)
dO d I fO
where nO is the refractive index within object space, nI is the refractive index
within image space, dO is the object distance from the principal plane, dI is the
image distance from the principal plane, and fO is the focal length within object
space. This concept may also be written as the Gaussian lens formula:
Figure 3.1 Thin-lens model of a relay lens with refractive indices of 1.5 for incident rays on
the front side and 1.0 for exiting rays on the back side. Front focal point (FFP), nodal point
(NP), principal point (PP), back focal point (BFP), object distance (OD), and image
distance (ID) are indicated. The OD is positive to the left (from PP to the front space). The
ID is positive to the right (from PP to the back space).
20 Chapter 3
1 1 1
+ = , (3.5)
sO s I f
where sO is the optical distance of the object, sI is the optical distance of the
image, and f is the focal length within air. Optical distance is the equivalent
distance in air.
A traditional Gaussian lens formula employs a specific polarity convention.
A positive focal length or distance is measured from a principal plane toward a
focal point. Verbal descriptions of image conjugates can be difficult.
Consequently, a thin-lens diagram is warranted.
The lateral magnification ML can be defined in several formats:
hI −s I
ML = = , (3.6)
hO sO
where hI is the height of the image and hO is the height of the object. In terms of
focal length, the magnification is expressed as
s −M s
(1 − M L ) = I = L O . (3.7)
f f
f
ML = . (3.8)
f − sO
During positive lateral magnification, the image moves in the same direction
as the object. The axial magnification is
Δs I
MA = = M L2 . (3.9)
ΔsO
MA
MT = = ML . (3.10)
ML
During positive lateral magnification, the image tilts in the same direction as the
object. The magnification of a lens is normally stated as the absolute value of the
lateral magnification:
M = ML . (3.11)
Basic Geometric Optics 21
1
R= . (3.12)
M
where n is the refractive index and fn is the focal length within the refractive
index. A diopter specifies a unit for optical power as reciprocal meters. Thus, a
focal length of 1000 mm indicates one diopter of power, while a focal length of
250 mm defines four diopters of power.
There are three formats of the optical power: transmission, external
reflection, and internal reflection. The polarity is positive when a collimated
incident beam becomes a convergent exiting beam. The optical power for
transmission is
1
φ T = Δn , (3.14)
R
wherein Δn is the change in refractive index and R is the radius of the surface.
The optical power for an external reflection is
1
φ ER = 2 . (3.15)
R
22 Chapter 3
1
φ IR = 2n . (3.16)
R
1
φ T = 0.5 . (3.17)
R
1
φ ER = 2 = 4 φ T . (3.18)
R
n
φ= , (3.20)
s
where h is the spatial height of an object. The spatial height of an object or image
is independent of the local refractive index, while the angular height is inversely
proportional to the local refractive index.
sin θ = θ . (3.22)
Basic Geometric Optics 23
The paraxial condition may also apply to an off-axis ray that is nearly equivalent
to the normal. The paraxial condition is a first-order approximation of Snell’s
law:
n 1θ1 = n 2 θ2 . (3.23)
d
s= , (3.24)
n
where d is the spatial distance and n is the refractive index. The optical distance
is expressed in units of spatial length. The optical path length is a length of the
phase within a wave:
nd
Λ= , (3.25)
λ
where Λ is the optical path length and λ is the spatial wavelength. The optical
path length is expressed in units of phase angle, cycles, or wavelengths. The
optical path difference normally refers to the optical path length. It is important
to carefully define these parameters, as they are frequently confused.
Figure 3.2 Thick-lens model of relay lens with refractive indices of 1.5 for incident rays on
the front side and 1.0 for exiting rays on the back side. Front nodal point (FNP) and back
nodal point (BNP) are shown.
Figure 3.2 displays a thick-lens model of a relay lens. The principal plane is
split into front and a back principal planes. Rays translate from the front to back
principal planes without a change in height. There are now two principal points
and two nodal points. Refraction in a thick lens depends on cardinal points in the
same fashion as a thin lens. A thick-lens model provides accurate location of
cardinal points within a lens barrel.
3.9 Magnifier
Figure 3.3 displays a thin-lens model for a magnifier. The object is located inside
the front focal point. The image is located outside of the front focal point. The
real rays on the back side of the lens do not extend to the front side. The real rays
are extended through the front side as virtual rays that originate from a virtual
image. A virtual ray does not exist in real space.
In Fig. 3.4, the angular magnification of a magnifier is defined by an object
at its front focal point. The magnifier converts the object into an infinitely distant
image. The angular size of the image with respect to the principal point is
α n = hO φ M , (3.26)
where α is the angle in radians, n is the refractive index, hO is the object height, f
is the focal length, and φM is the power of the magnifier. Thus, the angular
magnification is the optical power of the magnifier. The lateral magnification of
an object at the standard near point is
φM s NP
ML = = . (3.27)
φ NP fM
Basic Geometric Optics 25
Figure 3.3 Thin-lens model of a magnifier. Phantom lines (dash, dash, long dash) indicate
virtual rays and a virtual object. Solid lines indicate real rays.
Figure 3.4 Magnification of a magnifier with the object at the front focal point. Object angle
(OA) is defined by object height (OH) times magnification in diopters of power.
Chapter 4
Aberrations
As a consultant, this author has reviewed the design and performance of
numerous instruments and three common problems were found: ignorance of
physical optics, negligence of aberrations, and absence of a tolerance budget. At
least one member of the design team should indentify the type of aberration
within the lens. Spherical aberration grows with NA, coma grows with field
angle and NA, and astigmatism grows with tilt of the optic. These are important
considerations for an optical system design.
y=Mh
+ A1 p
(4.1)
+ B0 p 3 + B1h1 p 2 + B2 h 2 p1 + B3 h3
+ 0 Ci hi p 5-i + ,
5
where h is the object height and p is the pupil position. The first line indicates the
paraxial image height, which is simply the product of the magnification M and
the object height h. The paraxial image height specifies an image system without
aberration. The second line indicates a first-order aberration: defocus A1. The
third line indicates third-order aberrations: spherical aberration B0, coma B1,
astigmatism and Petzval curvature B2, and distortion B3.
Defocus occurs in several formats: an axial error in the position of the sensor
creates defocus across the entire image; a curved image surface creates variable
defocus across the field; a tilted surface creates astigmatism; a variation in
refractive index creates axial color. Defocus is indicated by a dependency on p1.
Figure 4.1 displays a report for a spherical lens with spherical aberration.
There is a dependency on p3. Spherical aberration is created by an increased
power of the marginal focus with respect to the axial focus. The marginal rays
are bent too much due to the spherical shape of the surface.
27
28 Chapter 4
Figure 4.1 Spherical aberration ray fan and spot. The spherical lens has a 20-mm focal
length, BK7 glass, and 0.25 NA.
Aberrations 29
Figure 4.2 displays a report for an aspheric lens with coma. There is a
dependency on hp2. Coma creates the appearance of hairy stars which resemble
comets. Comet is derived from the Greek word komē, meaning hairy, and astēr,
meaning star. Coma is created by both an axial and a lateral shift of the marginal
focus.
Figure 4.3 displays a report for an aspheric lens with astigmatism. There is a
dependency on h2p, which occurs in the tangential plane. Astigmatism is derived
from the Greek a-, indicating an antonym, and stigma, meaning spot. Ergo,
“astigmatism” means “no spot,” as in a line. There is focus along the tangential
pupili EY, while the spot is spread within the sagittal planeii EX. Astigmatism is
created by an axial shift of the tangential focus with respect to the sagittal focus.
The tangential pupil covers a larger arc angle due to the tilt of the lens.
Consequently, the tangential power is greater than the sagittal power.
The Petzval radius describes the radius of the paraxial focal surface. A
defocus by field position depends on h2p. Distortion describes a growth in focal
length with field position. The increased image height depends on h3, which is
not normally revealed in a ray fan. Both Petzval curvature and distortion are
normally described through dedicated plots for those features. For example, a
grid distortion plot might reveal a barrel or pincushion distortion of a square.
i
The tangential plane contains the optical axis and the field point.
ii
The sagittal plane contains the chief ray and is normal to the tangential plane.
30 Chapter 4
Figure 4.2 Coma ray fan and spot. The aspheric lens has a 20-mm focal length, BK7
glass, and 0.25 NA.
Aberrations 31
Figure 4.3 Astigmatism and lateral color ray fan and spot. The spherical lens has a 20-
mm focal length, BK7 glass, and 0.02 NA.
32 Chapter 4
Figure 4.4 Axial color ray fan and spot. The aspheric lens has a 20-mm focal length, BK7
glass, 0.20 NA, 0-deg field, F line (486 nm), d line (588 nm), and C line (656 nm).
Aberrations 33
( y R)
2
z=R + An y n , (4.2)
1 − (1 + K )( y R )
2
1+
where R is the radius of curvature, y is the height above the z axis, and K is the
conic constant. A conic constant of 0.0 defines a sphere that is easily created by
polishing. A conic constant of –1.0 defines a parabola, whereby reflection
converges a collimated beam into a point. A conic constant between 0.0 and –1.0
defines an ellipse, whereby internal refraction effectively converges a collimated
beam into a point. Finally, a conic constant beyond –1.0 defines a hyperbola,
whereby external refraction effectively converges a collimated beam into a point.
The Brewster window defines a practical limit for refractive aspheric surfaces. A
reflective parabola is limited only by tolerances on the field and surface form and
texture.
The polynomial coefficients An are useful for correction of aberrations. An A2
coefficient is normally zero because it is prominent in the conic section. A conic
constant of –0.4334 at the lens stop may correct for spherical aberration at the
cost of coma, as in Fig. 4.2. An A4 near the lens stop may also correct third-order
spherical aberration. An A4 and A6 near the field stop may correct astigmatism,
field curvature, or distortion. A single aspheric surface may completely correct a
single aberration at a single field point. However, complete correction at one
field point normally requires aberration at another. An aspheric surface at the
lens stop works best over a small angular field, whereas an aspheric surface at the
field stop works best at a small NA.
Chapter 5
Basic Physical Optics
5.1 Importance of Physical Optics
Physical optics defines the transport of light by the physics of wave propagation.
Maxwell’s equations and Fourier transformations are applied toward accurate
descriptions of point spread and defocus. Comprehension of the ensuing topics is
essential for an effective design of an optical instrument. Development of
comprehension is a product of exploration and application of these principles.
Refraction, reflection, and scatter are all based on the wave nature of light.
The Airy pattern is dependent on the diffraction of a circular aperture, and the
depth of focus is dependent on physical optics.
Most sections of this chapter have a more detailed version in Chapter 19,
which focuses on advanced concepts. At least one member of the optical design
team should comprehend the advanced concepts.
k 2 = εμω2 , (5.1)
2π
k= , (5.2)
λ
where λ is the spatial period. The temporal frequency ω in radians per time is
expressed as
2π
ω= , (5.3)
T
where T is the temporal period.
35
36 Chapter 5
ω 1
= = nc , (5.4)
k εμ
n 2 = εμc 2 . (5.5)
ω 2π
k =n =n , (5.6)
c λ
N = n + iκ , (5.7)
where the real part n is the refractive index and the imaginary part κ is the
extinction coefficient. The refractive index is largely dependent on bound charge
motion, while the extinction coefficient is dependent on free carrier motion.
Application of the complex refractive index to a plane wave yields the
electric field as follows:
where the real part indicates a cosine function and the imaginary part indicates an
exponential decay. The complex format facilitates differential operations.
2π
E = E0 cos n z − ωt . (5.9)
λ
−2π
E = E0 exp κz. (5.10)
λ
Figure 5.1 Drude model of silver. Refractive index is n, extinction coefficient is κ, and
reflectance is R at the d line (589 nm).
Figures 5.3 and 5.4 display the Lorentz spectra of silica. Both Lorentz
models employ a bound resonance at 100 nm. The refractive index resembles the
empirical data for silica,4 while the extinction coefficient varies greatly. The
lifetimes are varied for the purpose of exercise of the Lorentz model. In Fig. 5.3,
a lifetime at 800 bound cycles creates a reasonable estimate of the refractive
index; it grows more rapidly with a shorter wavelength, which defines normal
dispersion. In Fig. 5.4, the lifetime is much shorter at 100 bound cycles. The
refractive index does not grow more rapidly at shorter wavelengths, which
defines anomalous dispersion. Actually, in the example of Fig. 5.4, the refractive
index profile is flat from 0.2–1.0 μm, while the extinction profile is broadened.
Basic Physical Optics 39
Figure 5.4 Lorentz model of silica with a shortened lifetime. Absorption reduces the
magnitude of dipole current and dispersion. A shorter lifetime indicates low dispersion of
short flint.
Figure 5.5 Transmittance of a Lorentz model of silica. Absorption increases the width of
the absorption band. A shorter lifetime creates absorption of blue wavelengths. A short
lifetime displays a short spectrum in the blue.
5.4 Dispersion
During normal dispersion, the refractive index grows more rapidly with a shorter
wavelength. The Abbe number provides a metric for dispersion:
nd − 1
νd = , (5.11)
nF − nC
where nd is the d line of helium at 587.6 nm, nF is the F line of hydrogen at 486.1
nm, and nC is the C line of hydrogen at 656.3 nm.
The partial dispersion describes the change in refractive index as a fraction of
the change between the F and C lines. For example, the partial dispersion of the g
and F lines is defined as
n g − nF
PgF = . (5.12)
nF − nC
Basic Physical Optics 41
The g and F lines are both active in the blue region of color vision. Other
spectral lines are listed later in Table 17.6. The SCHOTT glass company defined
two glass types as normal in partial dispersion: a crown K7 and a flint F2.
There are two methods for decreasing dispersion νd: increasing resonant
frequency or decreasing resonant lifetime. A higher resonant frequency places
the resonant frequency deeper into the UV; this creates a flat index profile in the
visible regime. It also defines a long-spectrum crown, with a large distance
between resonant wavelengths. On the other hand, a shorter resonant lifetime
represents less dipole current; this also flattens the refractive index profile. A
shorter resonant lifetime also indicates absorption in the blue wavelength regime;
this defines a short-spectrum flint. Additional information on materials can be
found in Chapters 17 through 19.
During reflection, the tangential components must remain constant while the
magnitude of the propagation vector k remains constant. Consequently, the
reflection angle must equal the incident angle.
The Fresnel reflection and refraction coefficients are based on the continuity
conditions along the surface. There are two polarizations. A senkrecht
polarization specifies an upright electric field to the plane of incidence. A parallel
polarization specifies a parallel electric field to the plane of incidence. The
reflection coefficients for the electric field of a wave at normal incidence are
N1 − N 2
rSN = − rPN = , (5.14)
N1 + N 2
N2
tan θ B = . (5.16)
N1
5.6 Emission
Derivation of the irradiance of a dipole emission is
p
2
sin 2 θ
ID = , (5.17)
32 π2 ε 0 c3 r 2
where p is the temporal curvature of the dipole moment. This pattern resembles a
toroid with an inner diameter of zero. The irradiance is zero along the axis of the
toroid.
The total radiant flux of a dipole is
2
p
P= . (5.18)
12πε0 c 2
If dipole rotation creates an isotropic emission, then the radiant power is evenly
distributed over 4 π steradians. The irradiance of a spherical emission is
2
p 1
IS = . (5.19)
48 π2 ε0 c 3 r 2
The spherical irradiance is two-thirds the maximum for that of dipole emission.
A dipole can also absorb photon energy where electric-field polarization
might be critical. A constrained molecule can display anisotropic absorption with
polarization of the excitation field.
5.7 Absorption
Attenuation of the electric field may be expressed through the extinction
coefficient as
2π 2π
E = E0 exp − κz cos nz − ωt . (5.20)
λ λ
1
I = cε0 E0 exp ( −αz ) ,
2
(5.21)
2
where c is the speed of light, ε0 is the electric permittivity of free space, and α is
the absorption coefficient:
44 Chapter 5
2π 4π
α=2 κ= κ. (5.22)
λ λ
k x2 + k y2 + k z2 = k I2 , (5.23)
where kI is the ordinary spatial frequency of the internal medium. The external
wave obeys
k x2 + k y2 − α 2z = k E2 , (5.24)
Figure 5.8 Wave crests of total internal reflection: (a) top view of the xz plane, and (b)
side view of the xy plane at the midsection of the top view. A solid line shows a positive
peak, and a dashed line shows a negative peak.
Basic Physical Optics 45
where kE is the ordinary spatial frequency of the external medium. The ordinary
spatial frequency is smaller in the external medium. The external wave requires
an outward curvature α 2z , because the sum of the tangential inward curvatures
k x2 + k y2 exceeds the inward curvature of the external medium k E2 . In terms of
spatial frequency, the tangential spatial frequency is faster than the external
spatial frequency. In terms of wavelength, the tangential wavelength is shorter
than the external wavelength. These extraordinary conditions define the
exponential decay of an evanescent field.
AΩ = λ 2 , (5.25)
where A is the area of point spread, Ω is the solid angle of convergence, and λ is
the spatial wavelength. A Gaussian version of the space-angle product is
π
dG ( 2 ΝAG ) = λ = 1.27λ , (5.26)
4
where dG is the diameter of the Gaussian beam and NAG is the Gaussian NA.
The Gaussian space-angle product is based on a fundamental principle of
Fourier summation:
1
σ x σk ≥ , (5.27)
2
ω
k>N . (5.28)
c
π
ΝA M > n sin . (5.29)
2
5.10 Coherence
The axial version of the space-angle product is
4 2
Δz Δλ = λP , (5.30)
π
where Δλ is the wavelength range, and λP is the peak wavelength. The coherence
length within a refractive medium is
λ 2P
ΛC ≈ . (5.31)
n Δλ
2 J1 ( ρ k ΝA M )
E0 , (5.32)
ρ k ΝA M
where ρ is the radius about the optical axis, k is the spatial frequency, NAM is the
marginal NA, E0 is the electric field at the origin, and J1 is a Bessel function of
the first kind of the first order. A Bessel function is a solution to a second-order
differential equation with cylindrical boundary conditions.6 The irradiance of an
Airy pattern is expressed as
2
2 J1 ( ρ k ΝA M )
I Airy ( ρ ) = I 0 , (5.33)
ρ k ΝA M
where I0 is the peak irradiance (power per area). The first zero crossing of the
first-order Bessel function is
Basic Physical Optics 47
Figure 5.9 Point-spread functions of an Airy pattern and a Gaussian estimate. Standard
deviation of a Gaussian estimate to an Airy point spread is < 0.01 in magnitude.
γ J1 = 3.8317 . (5.34)
λ γ J λ
φ Airy = 1.22 = 1 . (5.35)
ΝA M π ΝA M
The peak irradiance of the Airy pattern is related to the total power P0 (quanta per
time) by
π ΝA 2M
I0 = P0 . (5.36)
λ2
The space-angle product of the Airy disk is derived from Eq. (5.35) as
2γ J1
φ Airy ( 2 ΝA M ) = 2.44λ = λ, (5.37)
π
where NAM is the marginal NA of the circular aperture responsible for the Airy
pattern.
48 Chapter 5
sin ( x )
sinc ( x ) = . (5.39)
x
r2
I = I 0 exp −2 2 , (5.41)
rG
4
dG ( 2 ΝAG ) = 1.27λ = λ , (5.42)
π
where NAG is the Gaussian NA. All dimensions for space and angle refer to the
Gaussian radius rG.
A Gaussian beam propagates as follows:
φ2 = φG2 + β2 z 2 , (5.43)
1 φ2
R= . (5.44)
z β2
A0 λ
zR = = , (5.45)
λ Ω
where A0 is the area of the waist. The area of the beam diameter doubles over the
Rayleigh distance:
AR = 2 AG . (5.46)
ΝA M 1.22
kM = = . (5.47)
λ φ Airy
kC λ
ΝA M = . (5.48)
1.6
50 Chapter 5
2 ΝAG = ΝA M . (5.49)
Figure 5.10 Modulation transfer functions of an Airy pattern and a Gaussian estimate.
Standard deviation of a Gaussian estimate from Airy MTF is < 0.05 in magnitude.
Basic Physical Optics 51
5.15 Scatter
Surface texture may create a random phase delay during reflection or
transmission. The scatter (or scatterance) applies to the irradiance as
2
S= s =φ 2 , (5.50)
where φ is the rms of the phase delay. The scatterance is frequently called the
total integrated scatter (TIS).
At an air-to-glass interface with refractive indices of 1.0 and 1.5, the
scatterance of transmission is
2
2πσ
S T = 0.25 , (5.51)
λ
where σ is the rms of surface texture and λ is the wavelength in air. The
scatterance of external reflection is
2
2πσ
S ER = 4 = 16 S T . (5.52)
λ
2
2πσ
S IR = 9 = 36 S T . (5.53)
λ
λ′ = λ cos θ . (5.54)
At normal incidence, the spatial frequency of reflection is half that of the filter
lattice.
Chapter 6
Fluorescence
6.1 Absorption Parameters
The absorption coefficient α applies to irradiance (power per area), while the
extinction coefficient κ applies to electric field (force per charge). The
transmittance T applies to the irradiance:
IT
T= = exp ( −αz ) , (6.1)
I0
4π
α= κ. (6.2)
λ
α = ρ αρ , (6.3)
where ρ is the molar concentration. The units of molar concentration are moles
per liter (mol/L). The units of molar extinction coefficient are concentration per
distance [moles per liter per centimeter (mol·L–1cm–1)]. It is important to
correctly define these similar metrics: absorption coefficient α, extinction
coefficient κ, and molar extinction coefficient αρ.
The absorbance for a small α is defined as
A = 1 − T = αz . (6.4)
53
54 Chapter 6
T2 exp ( −α 2 z )
= = exp ( α1 − α 2 ) z . (6.6)
T1 exp ( −α1 z )
T2
1 − = ( α 2 − α1 ) z . (6.7)
T1
N 2 s +1 L j , (6.8)
where N is the principal quantum number, s is the total spin quantum number, L
indicates the orbital angular momentum by letter (S, P, D, or F), and j is the total
angular momentum quantum number l + s. The multiplicity of the state is
Fluorescence 55
1240
E= eV nm . (6.9)
λ
An EA may convert the excited singlet state S1 into a similar triplet state T1 by
spin flip of an electron. The parallel spins of the triplet state have lower energy
than the antiparallel spins of the singlet state. Consequently, the electron cannot
return to S1 without another EA. The triplet state can return to the singlet ground
state S0 by phosphorescence (P), however, an EA is required for a spin flip
during phosphorescence. Consequently, the lifetime of a phosphorescent process
is typically seconds.
Figure 6.1 Jablonski diagram. S indicates a singlet state with opposing electron spins. T
indicates a triplet state with parallel electron spins. Absorption (A) promotes an electron
between singlet states. Emission (E) occurs at a similar energy to absorption.
Fluorescence (F) indicates an emission at a lower energy than A. An external action (EA)
converts a singlet state into a triplet state. Phosphorescence (P) indicates a slow process,
which is forbidden without another EA.
56 Chapter 6
limit of the initial vibration state 1. This indicates an absorption plot that rises
rapidly from zero with increasing energy. At greater absorption energy than A16,
the overlap decreases by exponential decay. During emission in Fig. 6.3(b), the
overlap grows exponentially with increasing emission energy until the final
vibration state 6 matches the limit of the initial vibration state 1. At greater
emission energy than E16, the overlap of the final state with the initial state
decreases rapidly toward zero. If the vibration modes of the ground and excited
states are similar in amplitude but different in location, then the emission
spectrum is a mirror image of the absorption spectrum. This trend toward mirror
image is common in fluorophores.
6.4 Fluorophores
Carbon is the most common element of a fluorophore. A benzene ring C6H6
displays a hexagonal structure with strong covalent bonds along the hexagonal
plane and weak dipole attractions across the hexagonal plane. Benzene is a
building block for organic molecules. Fluorophores are also called
chromophores.
Indole is a common organic compound within live organisms. The intrinsic
fluorescence of a live organism is frequently due to indole groups. Intrinsic
fluorescence is also called autofluorescence. The structure of indole in Fig. 6.4
comprises a hexagonal benzene ring and a pentagonal pyrrole ring. A pyrrole
ring contains five elements: four CH groups and one NH group. Neither benzene
nor pyrrole is fluorescent;8 however, their combination as indole is fluorescent.
58 Chapter 6
Figure 6.4 Indole structure. Vertices without labels are the carbon sites. Each carbon
requires four bonds. (a) HC bonds are displayed. (b) A carbon vertex with three bonds
must have a phantom hydrogen (H).
Figure 6.5 Adenine and thymine structure. Adenine and thymine are not fluorescent.
Dotted lines indicate weak connections between base pairs of RNA. The H* represent
sites that may also be carbon elements of the RNA backbone.
Fluorescence 59
Figure 6.6 2-AP and thymine structure. 2-AP is a fluorescent analog of adenine. Dotted
lines indicate weak connections between base pairs of RNA. H* represent sites that may
also be carbon elements of the RNA backbone.
Figure 6.8 Tryptophan spectra. Absorption (solid) and emission (dotted) are nearly mirror
images.
Figure 6.9 Fluorescein structure. A synthetic green fluorescent molecule. A carbon vertex
with three bonds must have a phantom H.
Figure 6.10 Fluorescein spectra. Absorption (solid) and emission (dotted) display
significant overlap. Spectra are mirror images.
62 Chapter 6
Figure 6.12 Green fluorescent protein (GFP). Excitation of a molecule triggers ejection of
a proton. Variable node V determines the spatial extent of an exited state and the
wavelength of fluorescence. The excited state of green emission ends at node V. The
excited state of red emission ends at ribbon node R. The chromophore sits within a barrel
formed by a chain of linear proteins in the form of a ribbon.
Chapter 7
Optical Design Metrics
7.1 CAD Tools
There are numerous genres of computer-aided design (CAD) tools. They offer a
variety of metrics in a range from simple illumination calculations to complex
wave propagation. It is important to remember that every tool has its limitations.
Mastery of these tools requires education and practice.
Various CAD tools are demonstrated in Secs. 7.2–7.9 through application to
a doublet with a 40-mm focal length. The doublet functions as a 5X objective in
combination with a 200-mm tube lens. The object field height at 1.2 mm
translates into a 6.0-mm image height, which accommodates the 11.3-μm
diagonal of a 1000 × 1000 array of 8-μm pixels. The projected pixel at the object
is 0.8 μm.
The ensuing metrics employ the object side of the lens as the image. The
effective object distance (or tube length) is infinite. The entrance pupil is 10 mm.
The image NA is 0.0125. The Airy radii are 2.37 μm for the F line (486 nm),
2.86 μm for the d line (588 nm), and 3.20 μm for the C line (656 nm).
Some metrics require sampling of the image. Sampling normally occurs at
2N × 2N, where N is an integer. Errors due to insufficient sampling must be
considered. The shape of the ray-intercept plot should predict any calculations
based on sampling.
63
64 Chapter 7
Figure 7.1 Wavefront error of 5X doublet. A solid line indicates the F line (486 nm). A
short dash indicates the d line (589 nm). A long dash indicates the C line (656 nm).
The wavefront error of Fig. 7.1 reveals several important features. The d line
(588 nm) indicates a wavefront error of 0.1λ, which is considered perfect within
the limits of an Airy pattern. The p4 shape of the F line (486 nm) indicates a
fourth-order spherical aberration in wavefront error. The positive wavefront error
of the margin indicates a marginal convergence greater than the perfect optimum.
The negative wavefront error of the C line (656 nm) indicates axial color, where
the convergence is less than the perfect optimum.
A collimating optic, such as a beam expander or a laser, is normally qualified
by a wavefront error, which may be calculated and/or measured. A CAD tool
may define fabrication and assembly tolerances for an acceptable wavefront
error. A wavefront analyzer may provide empirical data as confirmation of
wavefront quality. The wavefront error is an essential parameter for application
of laser beams.
Figure 7.2 Ray-intercept plot of a 5X doublet. The tangential error EY is plotted versus the
tangential pupil PY. The sagittal error EX is plotted versus the sagittal pupil PX. A solid
line indicates the F line (486 nm). A short dash indicates the d line (588 nm). A long dash
indicates the C line (656 nm).
66 Chapter 7
The ray intercept of Fig. 7.2 reveals several important features. The fans are
normally defined for three different positions: the on-axis position at zero field
height, the margin of the field, and 0.7 times the margin of the field, which
represents half the field area.
The on-axis F line (486 nm) indicates a paraxial focus through a flat slope in
the central pupil zone. However, the marginal portion of the F line indicates both
third- and fifth-order spherical aberration. The on-axis d and F lines both display
third-order spherical aberration. The slopes of the F-line plots decrease steadily
with field height. This indicates the defocus of Petzval curvature. The dissimilar
slopes of F-line plots between EY and EX indicate astigmatism. A small
downward curvature in the tangential F-line plots indicates coma. The
astigmatism is larger than the coma.
Figure 7.3 Spot diagram of a 5X doublet. Wavelength is at the d line. Ray locations are
indicted by ×. The Airy disc is defined by a circle within the field at 1.2 mm.
Figure 7.4 Point spread of a 5X doublet that is monochromatic at d line. The field is at 1.2
mm. The Strehl ratio is 21%. Sampling is at 128 × 128.
68 Chapter 7
Figure 7.6 MTF of a 5X doublet, where T is the tangential plane and S is the sagittal
plane. The modulus is the modulation index. Sampling is at 64 × 64 along the plot scale. A
conical approximation (dashed line) indicates a conical frequency at approximately 100
cycles per millimeter.
Some vendors provide MTF data for lenses, while many do not. A conical
approximation may be derived from published data. Ronchi rulings may provide
empirical measurement at spatial frequencies up to 500 line pairs/mm.
Figure 7.7 Edge spread of a 5X doublet. The edge is along the sagittal plane (xz), and
edge spread is along the tangential plane (yz). Sampling is at 128 × 128.
report for the 5X doublet. The line spread and encircled energy are
monochromatic at the d line (588 nm). The right end of the flat spot of the
monochromatic encircled energy is a fair estimate of the Airy radius. Due to the
space constraints of this book, only one field point is active in each quadrant.
The current Fig. 7.8 is described by Prescription 7.8 in the Appendix. A
boxed cell indicates a variable during operation. (A corresponding prescription to
every lens report is located in the Appendix. The prescription numbers correlate
to the figure numbers.)
Figure 7.8 Lens report of a 5X doublet. Top left: layout. Top right: line spread. Bottom left:
ray intercept. Bottom right: encircled energy. A single point at the field margin (1.2 mm) is
employed for each quadrant.
Δn N F λT
ΛT = cyc , (7.1)
2 λA
where Δn is the change in refractive index, λT is the test wavelength, and λA is the
application wavelength. In reflection, the test fringes convert optical path length
as
λT
ΛR = n NF cyc , (7.2)
λA
Φ OP − Φ BP
C= , (8.1)
Φ BP + Φ D
where ΦOP is the flux of the object pixel, ΦBP is the flux of the background pixel,
and ΦD is the flux of the detector. The range of contrast is from –1 to +∞. A
negative contrast indicates a dark object within a bright background. A positive
contrast indicates an object that is brighter than the background. Quite often both
objects are rather dark.
The flux of the detector has numerous components, as described in Chapter
15. The two most common are dark current and read noise. They are often stated
as electron currents. The flux of the detector may be expressed as
Φ DC + Φ RN
ΦD = , (8.2)
ηQ
where ΦDC is the mean flux of the dark current in electrons per pixel, ΦRN is the
mean flux of the read noise in electrons per pixel, and ηQ is the quantum
73
74 Chapter 8
Incidence I Incident flow per area flow per area, flow per pixel
Irradiance watts per area (W·cm–2)
Illuminance lumens per area (lm·m–2), lux (lx)
Radiance L Flow per area per angle flow per pixel per hemisphere
Radiance watts per area per angle (W·cm–2sr–1)
Luminance candelas per area (cd·m–2)
Detector noise must also be considered. Dark current, read noise, and dark
noise are three common metrics of electronic detectors of light. The object signal
may overcome the read noise through integration. However, the object signal
cannot overcome the dark current by integration. The dark current and read noise
should be extracted from the dark noise of a detector specification. The shot
noise of the dark current and the object signal should also be considered.
μ n exp ( −μ )
P ( n) = , (8.4)
n!
where μ is the mean and n is the count. The Poisson distribution for a mean dark
current of 10 electrons is displayed in Fig. 8.1, where the count ranges from 5 to
15. The Poisson distribution for a mean dark current of 100 electrons is displayed
in Fig. 8.2, where the count ranges from 80 to 120.
As the mean count increases, the standard deviation of the shot count
approaches the square root of the count. The flux of the shot noise may be
expressed in arbitrary units of flux as follows:
where qS is the discrete quantum of the shot, Φ is the mean flux, and Q is the
expected quantum. The contrast with shot noise grows by the square root of the
expected quantum Q:
Φ
= Φ SN = qS Q as Q > 1000 . (8.6)
Φ SN
The total flux of the shot noise of the system is fairly estimated by a sum of the
squares:
Φ 2S = qS Φ O + qS Φ B + qS Φ D . (8.7)
Ideally, the shot noise of the object should be the limiting noise of the system.
However, this is not always possible.
Chapter 19 provides more detail on shot noise.
E
LI = , (8.8)
2π
E
LL = cos θ . (8.9)
π
ΩC θ
ηSIE = = sin 2 n , (8.10)
4π 2
ΝA 2M
ηSIE = . (8.11)
4n 2
ΩC θ
ηHIE = = 2 sin 2 n . (8.12)
2π 2
ΝA 2M
ηHIE = = 2ηSIE . (8.13)
2n 2
θn cos θ
ηHLE = ( 2π sin θ d θ ) = sin θn ,
2
(8.14)
0
π
where the first group in parentheses is the normalized Lambertian radiance, and
the second group in parentheses is the differential solid angle.
At small angles, the collection efficiency for a hemisphere of a Lambertian
emission is
ΝA 2M
ηHLE = = 2ηHIE . (8.15)
n2
A0 Ω0 = A1Ω1 = = An Ωn , (8.16)
where A is the area of an image and Ω is the solid angle of the lens at the center
of the image. The contrast of a full-pixel object10 is expressed in large-angle
format as follows:
LO − LB
CFPO = −1
. (8.17)
LB + Φ D APP ΩO−1
The terms of pixel-based radiometry are defined Table 8.2. They are largely
based on the projection of the pixel on the object.
Symbol Name
AO Area of the object
APP Area of the projected pixel at the object
dO Dimension of the object
dP Dimension of the pixel at the detector
dPP Dimension of the projected pixel at the object
EB Emittance of the background
EO Emittance of the object
ΦD Flux of the detector
ΦO Flux of the object
ηC Spherical collection efficiency of the central aperture
ηD Quantum efficiency of the detector
ηM Hemispherical collection efficiency of the marginal aperture
ηP Efficiency of a pixel
ηSR Efficiency of the Strehl ratio
LB Radiance of the background
LO Radiance of the object
NAM Marginal numerical aperture at the object
NAC Central numerical aperture at the object
n Refractive index at the object
λ Spatial wavelength within air
θM Marginal angle of the lens stop at the object
θC Central angle of the lens stop at the object
ΩO Angle of collection at the object
80 Chapter 8
LO − LB
CFPO = . (8.18)
LB + Φ D ( M 2 d P−2 )( π−1ΝA −M2 n 2 )
The full-pixel contrast displays several dependences of interest. The effect of the
detector is enhanced by the magnification and refractive index of the object. The
effect of the detector is reduced by the dimension of the pixel and the marginal
NA.
CSPO =
( LO − LB ) AO APP−1 =
AO
CFPO .
−1 −1
(8.19)
LB + Φ D A Ω PP O APP
CSPO =
( LO − LB ) dO2 . (8.20)
LB ( d P2 M −2 ) + Φ D ( π−1 ΝA −M2 n 2 )
Figure 8.4 Redistribution of the radiance of a subpixel object. Contributing signals include
the object (O), background (back), path, and equivalent noise of detector (END).
Image Contrast 81
Φ O ηP ηC
CGPS = . (8.21)
LB APP ΩO + Φ D
Φ O ηP ( π ΝA C2 n −2 )
CGPS = . (8.22)
LB ( d P2 M −2 )( π ΝA 2M n −2 ) + Φ D
CFPA =
EO ηC
=
( Φ O π ΝA C2 λ −2 ) n −2 sin 2 (θC / 2)
. (8.23)
−1
EB ηM + Φ D APP EB 2n −2 sin 2 (θ M / 2) + Φ D d P−2 M 2
CFPA =
( Φ π ΝA λ )( ΝA / 4n ) =
O
2
C
−2 2
C Φ ( π ΝA λ n )
2
O
4
C
−2 −2
. (8.24)
E ( ΝA / 2n ) + Φ d M
B
2
M
2
E ( 2ΝA n ) + Φ ( 4d
D
−2
P
2
B
2
M
−2
D
−2
P M2)
The full-pixel Airy contrast displays several dependences of interest. The effect
of the detector increases with magnification. The object signal grows faster than
the background until NAM exceeds NAC. However, as NAM exceeds NAC, the
object signal remains constant while the background signal grows rapidly with
NAM. Ideally, NAM should not exceed NAC. Also, a higher sampling of the Airy
pattern through a larger magnification degrades contrast of the object with the
detector.
The marginal and central NAs are related by the efficiency of the Strehl ratio
as follows:
ηSR ΝA 2M = ΝA C2 . (8.25)
The full-pixel Airy contrast is expressed in terms of the Strehl ratio as follows:
The full-pixel Airy contrast increases rapidly with marginal NA until the
Strehl ratio starts dropping below unity.
A developer of an algorithm must consider the detrimental effects of
increased sampling on the Airy pattern. The required magnification increases the
Image Contrast 83
85
86 Chapter 9
Figure 9.1 10XR double-Gauss F/1.4. Focal length is 52 mm. Lens f/# is 1.4. Image space
f/# is 1.5. Image NA is 0.31. Edge spread: 512 × 512 sampling. Encircled energy:
512 × 512 sampling. Prescription by G. H. Smith (2009), Lens 23.3.12
Figure 9.2 10XR microlens F/2.9. Focal length is 100 mm. Image space f/# is 3.2. Image
NA is 0.15. Edge spread: 64 × 64 sampling. Encircled energy: edge: 64 × 64 sampling.
Prescription by Matsui.13 Flat plate added as a filter in object space.
Figure 9.3 2XR microlens F/2.9. Focal length is 100 mm. Image space f/# is 4.3. Object
NA is 0.058. Image NA is 0.116. Edge spread: d line, image field 6.0 mm, 64 × 64
sampling. Encircled energy: edge: d line, image field 6.0 mm, 64 × 64 sampling.
Prescription by Matsui.13 Flat plate added as a filter in object space.
9.4 1X Microlens
Figure 9.4 displays a microlens at 1X for application to an image sensor with a
12-mm diagonal of 6.0-mm image field height. The sagittal plane indicates both
third- and fifth-order spherical aberrations, where the fifth-order aberration is
larger than the third. The C, d, and F lines are not well corrected to each other.
The tangential plane indicates a small amount of lateral color for the F line and a
small amount of coma for all wavelengths, as the plots all curve downward. The
image-space f/# is 5.5.
The microlens at 1X functions poorly for CCD sensors. It has similar
problems as the microlens at 2XR but with larger magnitude. The edge spread is
> 20 μm. The flat of the encircled plot indicates a diffraction limit of
approximately 4.0 μm in radius. The aberration limit is > 20 μm. The microlens
at 1X aberration beyond a CCD pixel size is not optimized for a 10-μm pixel. A
tolerance budget in manufacture would indicate larger errors.
Microlens Formats 89
Figure 9.4 1X microlens F/2.9. Focal length is 100 mm. Image space f/# is 5.5. Object NA
is 0.089. Image NA is 0.089. Edge spread: 64 × 64 sampling. Encircled energy: edge: 64 ×
64 sampling. Prescription by Matsui.13 Flat plate was added as a filter in object space.
Figure 9.5 2XR telecentric spectroscopy lens. Wavelengths: Ar (argon 514 nm), d line
(588 nm), and C line (656 nm). Focal length is 193 mm. Image space f/# is 4.0. Object NA
is 0.063. Image NA is 0.126. Edge spread: d line, image field 6.0 mm, 64 × 64 sampling.
Encircled energy: edge: d line, image field 6.0 mm, 64 × 64 sampling. Prescription patent
pending by Seward.14
Figure 9.6 displays the two groups of the TSL. Group 1 corrects the primary
aberrations, which are largely dependent on NA. The aspheric surface of group 1
manages the third- and fifth-order spherical aberration. The doublet manages the
axial color and coma. Group 2 corrects the secondary aberrations of field angle.
The aspheric surface of group 2 manages astigmatism and field curvature. The
concave surface also manages astigmatism and field curvature. A lanthanum
krone (LaK) of the aspheric lens of group 2 manages lateral color. The flange of
the asphere of group 2 provides the precise axial location of group 2. The chief
rays are telecentric, which is beneficial for sensors with a microlens over each
pixel. This lens is highly optimized for spectroscopy. A filter is placed in the
infinity correction zone of group 1. Consequently, filters can be swapped without
disruption of focus. The reduced spectrum of 514–656 nm eliminates chromatic
aberrations of the blue spectrum, which are frequently not active in spectroscopy.
Microlens Formats 91
Figure 9.6 Lens groups of 2XR telecentric spectroscopy lens. Aspheric surface (ASP),
filter of group 1 (F), flange of group 2 (F), chief ray (CR), cover glass (C), and sensor (S).
The object space defines a 0.063 NA. Application of Eq. (1.8) to the d line
yields a Gaussian depth of 94 μm. A 0.19-mm depth of focus is reasonable for
consistent operation. A reasonable tolerance is essential for automated loading as
well as accommodation of tilt of the specimen plate. Effective management of
tolerances is a critical part of instrument design.
The hemispherical collection efficiency (HCE) of the TSL is displayed in
Fig. 9.7. The object space of the marginal NAs are calculated from the marginal
ray angles. The 2XR TSL (0.063) displays a total HCE as 0.000 55. The 2XR
ML (0.058) displays a total HCE as 0.000 46. The 1X ML (0.089) displays a total
HCE as 0.001 07.
The ML at 1X is a fine lens for imaging of fluorescent arrays. The 1X ML
collects nearly twice as much light as the TSL and ML at 2XR. However, the
maximum HCE of the 1XR requires a 20-μm pixel. The higher object NA defines
a smaller depth of focus, which is difficult to manage by tolerance of placement.
The TSL offers superior color correction to both versions of the ML. A filter
may be swapped without a disruption of focus. The fewer pieces define a simpler
tolerance budget and better transmittance. However, a disadvantage of the TSL is
cost.
An aspheric lens in small quantities is expensive to manufacture. A
coordinated process of interferometry, grinding, and polishing is required. An
aspheric lens with a 60-mm diameter and a wavefront error of 0.1λ costs about
$3000 per unit in the year 2009. Fortunately, this cost may be recovered through
a reduction in consumption of chemicals during operation.
The TSL is suited for applications wherein photons are precious.
Fluorophores can photobleach after just 200 photons of emission, reagents can be
expensive, and potential drug compounds from extinct plants may be used only
in small amounts. There are many applications for the telecentric spectroscopy,
even with a 10X cost over a mass-production lens.
92 Chapter 9
Figure 10.1 Condenser lens (CL), illumination field (IF), and stops: illumination field stop
(IFS), illumination lens stop (ILS), and vision lens stop (VLS). Cardinal points: Front focal
point (FFP), principal point (PP), and back focal point (BFP).
93
94 Chapter 10
Figure 10.2 Source relay of critical illumination. Source (S), source collector lens (SCL),
source field lens (SFL), source image (S′), illumination field stop (IFS), and illumination
lens stop (ILS). Illumination NA should be 0.75 times vision NA.
Illumination Systems 95
λ
d Abbe = , where ΝA S ≤ ΝAV , (10.1)
ΝAV + ΝA S
where dAbbe is the minimum separation of the features, NAV is the NA of the
vision system, and NAS is the NA of the source. A point source defines a
completely coherent illumination field. The Abbe resolution of a coherent field is
λ/NAV. A broad source NAS ≥ 0.75 NAV defines an incoherent system. The Abbe
resolution of a broad source is limited by the vision system. The effective NA of
the illumination field cannot exceed that of the vision field. Consequently, the
Abbe resolution of an incoherent system cannot exceed 0.5λ/NAV. The partial
coherence of the illumination resembles the point spread of an Airy pattern as
follows:
2 J1 ( ρ k NA S )
Γ (ρ) = . (10.2)
ρ k NA S
10.4 Diffusers
The coil structure of a filament is extremely nonuniform. Consequently,
placement of a filament near an image conjugate creates an image of the filament
at the sensor. A diffuser is required for reduction of the filament structure of the
image.
A diffuser spreads light over both space and angle. Consequently, the
etendue of the illumination increases and the radiance decreases. Increased
uniformity by diffusion requires significant reduction of radiance. Consequently,
the image brightness decreases. An improved uniformity over space and angle
normally requires a reduction of image brightness.
Diffusers are notorious for inconsistent performance. The effects of an acid
etch are dependent on time of exposure and composition of materials. Sand
blasting employs variable grain size. Opal glass employs diffuse scattering
throughout its volume. An opal diffuser creates an extremely isotropic radiance
in transmission. However, much incident light is backscattered. The
inconsistency of a diffuser in production might create enormous variations
between instruments.
The emission of a filament is uniform over angle. Consequently, conversion
of the angular extent of a filament into a spatial extent is highly beneficial.
Ideally, the filament should be located at an image conjugate of the lens stop.
This is a foundation of Köhler illumination.
i
The Abbe resolution applies to the spacing of a grating.
96 Chapter 10
Figure 10.3 Principles of Köhler illumination. The image of a source (S′) is distant from the
illumination field (IF). The image of an illumination lens stop (ILS′) is distant from the
illumination field (IF).
The stops of Köhler illumination are displayed in Fig. 10.4. A first variable
iris is placed at the illumination field stop. The illumination field stop defines an
illumination field that should overfill the vision field. Illumination far beyond the
vision field is detrimental to contrast because the specimen might scatter light in
the vision field. A second variable iris is placed at the illumination lens stop. The
illumination lens stop defines an illumination NA which should underfill the
vision lens stop. Illumination beyond the vision lens stop is highly detrimental to
contrast because the objective barrel is normally stainless steel, which reflects
extraneous light into the vision system.
(a)
(b)
(c)
Figure 10.4 Stops of Köhler illumination: (a) maximum extent of rays, (b) relay of the
illumination field stop (IFS), and (c) relay of the illumination lens stop (ILS).
98 Chapter 10
The radiance of the sun is eye safe at 0.5 deg but is not eye safe after
magnification. The irradiance of the sun’s image at the retina does not change
after magnification; however, the cooling geometry of the image is much
different. During normal vision, the 0.5-deg image of the sun is absorbed over a
small sphere that creates a spherical cooling geometry, which permits safe
dissipation of heat. During magnification, however, the image of the sun is
absorbed over a disk that creates a planar cooling geometry, which cannot
dissipate heat quickly enough to prevent damage to the eye. Consequently, any
magnification of the sun might create a retinal burn.
This warning about the sun also applies to high-brightness LEDs. The
American National Standards Institute (ANSI) has specific information on
diffuse emitters, such as LEDs, as part of its standard for safe use of lasers,
Z136.1.19
The eye has two defense mechanisms against bright light: a blink and a large
saccade. A blink is the closure of the lid. The typical reaction time for a blink is
0.18 s. The ANSI standards19 define an aversion response of 0.25 s for visible
light; this defines a 5-mW limit for a class III(a) laser, which is safe within a
blink of an eye. On the other hand, a class III(b) laser is not safe within a blink of
an eye. A large saccade is a gaze shift that normally occurs within 10 s. The
ANSI standards19 define an aversion response of 10 s for invisible light.
Figure 12.14 in Schubert11 indicates emission by material type. Gallium
nitride with indium (GaInN) emits in the blue (450–490 nm) and green (515–570
nm) wavelength ranges. GaInN can be grown on a sapphire (Al2O3) substrate;
however, there is significant strain due to lattice mismatch. Gallium phosphide
(GaP) can emit weakly in the yellow (570–580 nm), which is near the peak of
human sensitivity at 555 nm. Gallium arsenide with aluminum and indium
(AlGaInAs) emits strongly in the orange (585–620 nm). Aluminum gallium
arsenide (AlGaAs) emits strongly in the red (625–740 nm). There is a significant
dead spot in LED emission in the green side of the yellow wavelength range
(530–580 nm). LEDs offer much longer lifetimes than incandescent filaments.
Schubert11 provides a practical review of photopic vision, which is based on a
red, green, and blue cones.
The peak wavelength of emission is strongly dependent on concentrations of
the components during vacuum deposition. Typically, the peak wavelength varies
by as much as the full width at half maximum of emission. Many dyes and
fluorophores are dependent on a narrow band of excitation. A tolerance for peak
wavelength of excitation should be established. The peak wavelength varies
greatly by production run; a typical variation is 3–5% of the nominal peak
wavelength.
A white LED is generated by a blue LED and white phosphor. The phosphor
creates a uniform spectrum distribution along with a variable blue peak. A white
LED has an artificial appearance in comparison to an incandescent bulb.
The packaging of an LED is dependent on its power. A low-power package
encapsulates the die and leads in epoxy, which also provides structural support. A
high-power LED package requires a heat sink in direct contact with the LED
100 Chapter 10
chip. The LED chip of a high-power package can be exposed to the air or
covered by a lens. A high-power LED package typically employs silicone as the
encapsulate.
Epoxy resin provides excellent stability over time. However, an epoxy resin
cannot tolerate high temperatures (> 120° C). Epoxy might also exhibit reduced
transmission of red, violet, and UV rays. The refractive index of epoxy is
typically 1.6, while the refractive index of GaP is approximately 3.5. A higher
refractive index of the encapsulate promotes extraction of photons from the LED
chip. A low-power package frequently employs an epoxy lens at a 5-mm-
diameter T1-3/4 package. The placement error of the chip within a T1-3/4
package is large, as the decenter can exceed the emitter width.
A silicone encapsulate can tolerate the higher temperatures (190° C) of high-
brightness LEDs. Polysiloxane is the correct chemical name, which indicates a
chain of siloxane groups R2SiO, with a variety of side groups R. The refractive
index can range from 1.4 to 1.6 with dependency on the composition of the side
groups R. The stiffness is also dependent on the composition of the side groups.
A high-brightness LED typically employs a 5.6-mm-diameter hemispherical
dome as the encapsulate.
There are numerous lenses that fit over the standard 5.6-mm dome. An LED
lens typically comprises a central refractor and an annular reflector.20 The
combination of refractive and reflective elements defines a catadioptric LED
lens. The material normally used is polymethylmethacrylate (PMMA), with a
refractive index of 1.49. The uniformity of a catadioptric LED lens is not suitable
for application to microscopes.
Figure 10.5 Aspheric relay 4XR 0.25. The magenta ring is defined by two bends in the
edge spread. Polychromatic edge spread employs 1024 × 1024 sampling. Both lenses are
stock production.
Figure 10.6 Achromatic aspheric relay 4XR 0.25. A custom doublet in combination with a
stock aspheric lens.
Figure 10.7 Abbe illumination relay 4XR 0.25. Stock spherical elements.
Illumination Systems 103
Figure 10.8 Aspheric Abbe relay 4XR 0.25. Custom aspheric elements utlizing B270 glass
for molding.
where nL is the refractive index of the liquid and nC is the refractive index of the
cover. The angle of the TIRF beam is described by a thick-lens model, where the
principal plane is a sphere within the cover slip. The angle of the TIRF beam in
the cover is defined by the height of the beam hB as follows:
h
sin θBC = B , (10.4)
nC f
where nC f is the focal length within the refractive index of the cover. Conversion
from glass to silica shortens the immersion focal length. The angle of TIR at
water grows from 61 deg in borosilicate to 66 deg in silica.
Figure 10.9 TIRF illumination 60X. The TIR of the laser beam provides shallow excitation
on the back side of the cover. The angle of TIR is 60.4 deg for D-263 and water. The
prescription is the same as the 60X immersion lens of Fig. 12.5.
Chapter 11
Cover Strata
11.1 Importance of Specimen Tolerance
A specimen tolerance budget is essential for consistent performance of an optical
instrument. The cover strata should have a specification for nominal thickness
and tolerance. Exceeding the specimen tolerance might create enormous
spherical aberration. Spherical aberration can reduce contrast without an apparent
growth in spot size. Other important issues for the specimen are intrinsic
fluorescence, surface-form error, surface defects, and surface texture.
105
106 Chapter 11
Figure 11.1 Perfect 10X objective in air. Focal length is 20 mm, object NA is 0.25, and the
lens stop is 10 mm in diameter. Line-spread is polychromatic, and encircled energy is at
the d line. Field height is at 0.6 mm. Axial defocus of 1 nm is intentionally included for
visualization of ray-intercept plots.
The corresponding merit function for a perfect 10X objective employs three
basic metrics: the ray intercept of a top marginal ray, the ray intercept of a
bottom marginal ray, and a Strehl ratio for the d line at the field margin. A
process of iteration drives a single variable (lens-stop thickness) toward the
maximum Strehl ratio at the field height.
Figure 11.1 displays a lens report for perfect 10X objective within air. A
nanometer of axial length beyond perfect focus creates a small amount of
defocus. The ray-intercept plots for all three wavelengths are colinear. The
amplitude of defocus error is far below the Airy radius at 1.5 μm for the d line.
The edge spread is 0.8 μm wide. The flat of the encircled-energy plot ends near
1.5 μm.
Figure 11.2 Glass cover in image space for a perfect 10X objective in air. Glass cover:
D263M at 0.17 mm thick. Focal length is 20 mm, object NA is 0.25, and the lens stop is 10
mm in diameter. Line-spread is polychromatic, and encircled energy is at the d line. Field
height is at 0.6 mm.
Dimensions (mm)
Number Nominal Minimum Maximum Range Typical area
0 0.10 0.085 0.115 0.030 15 × 15 to 24 × 60
1 0.15 0.130 0.160 0.030 15 × 15 to 24 × 60
1.5 0.17 0.160 0.190 0.030 15Ø, 15 × 15, 24 × 50
2 0.21 0.190 0.230 0.040
3 0.30 0.280 0.320 0.040
4 0.37 0.320 0.420 0.040 24 × 50
5 0.55 0.500 0.600 0.100
Slide 1.00 0.960 1.060 0.100 25 × 75
Slide 1.20 1.100 1.200 0.100 25 × 75
Figure 11.3 Glass slide in image space for a perfect 10X objective. Glass slide: D263M at
1.0 mm thick. Focal length is 20 mm, object NA is 0.25, and the lens stop is 10 mm in
diameter. Line spread is polychromatic, and encircled energy is at the d-line. Field height
is at 0.6 mm.
mm. The spatial distance is > 5.0 mm due to immersion with the cover glass. On
the image side, silica replaces D263M as the cover material. The material in
image space may be glass, silica, water, or air. Silica is used in this example for
simplicity. At higher NAs with immersion oil, the choice of image material
becomes important as total internal reflection becomes possible.
Figure 11.4 displays a perfect 40X objective with silica in place of D263M
on the image side. The object-space NA is 0.75. The image-space NA is 0.74.
There are small amounts of axial color and third-order spherical aberration. There
is a large fifth-order spherical aberration at the margin. However, the encircled-
energy plot indicates diffraction-limited performance. The Strehl ratio of the
margin is 100% for the d line and 98% for the polychromatic combination of the
F, d, and C lines. Thus, a 40X objective at 0.75 NA can operate properly with a
silica cover in place of a glass cover. However, the NA cannot increase with
inclusion of a larger spherical aberration.
Figure 11.4 Silica specimen cover replacing a glass cover in image space for a perfect
40X objective. Silica is used in place of D263M for the cover material at 0.17 mm thick.
Focal length is 5 mm, object NA is 0.75, and the lens stop is 8.6 mm in diameter. Line-
spread is polychromatic, and encircled energy is at the d line. Field height is at 0.15 mm.
110 Chapter 11
Figure 11.5 Tilt of the glass specimen cover in image space for a perfect 40X objective.
Cover is at a tilt of 0.5 deg (9 mrad). Cover material is D263M at 0.17 mm thick. Focal
length is 5 mm, object NA is 0.75, and the lens stop is 8.6 mm in diameter. Line-spread is
polychromatic, and encircled energy is at the d line. Field height is at 0.15 mm.
Figure 11.6 Silica specimen cover replacing a glass cover in image space for a perfect
60X objective. Silica is used in place of D263M for the cover material at 0.17 mm thick.
There is immersion oil between the lens stop and cover. Focal length is 3.3 mm, object NA
is 1.40, and the lens stop is 9.3 mm in diameter. Line-spread is polychromatic, and
encircled energy is at the d line. Field height is at 0.10 mm.
of 0.50 before a cover tolerance degrades the spot; the 200λ path indicates a
maximum NA of 0.35 before a slide tolerance degrades the spot; the 1200λ path
indicates a maximum NA of 0.20 before a slide degrades the spot.
Consideration of specimen tolerances is critical for consistent performance of
an instrument. Application of a binder adds significant amounts of unexpected
optical path length when using a glass cover. The tolerance on the binder
thickness might exceed the nominal thickness of the cover. A large amount of
binder might enable tilt of the cover. A credible tolerance for a specimen should
be defined before an optical instrument is designed. Consistent performance is a
mark of quality in optical design and manufacture.
Figure 11.7 Strehl ratio versus optical path length of an additional cover. Optical path
lengths are cited in wavelengths. Spatial thickness of D263M is cited in parentheses. 50λ
(29 μm) indicates a tolerance for a cover glass. 200λ (120 μm) indicates a tolerance for a
microscope slide. 2000λ (1200 μm) indicates a thickness for a microscope slide.
Chapter 12
Objective Lenses
12.1 Formats
There are numerous types of objectives; several are listed below:
1. An aplanati is free from spherical aberration and coma.
2. A plan objective has a flat field: there is no Petzval curvature.
3. An achromat is corrected at two wavelengths.
4. An apochromat is corrected at three wavelengths.
5. A semiapochromat is nearly corrected at three wavelengths.
The original fluorite objectives corrected for color with fluorite glass, but
lanthanum glass eventually replaced fluorite in most applications. A modern
fluor objective contains LaK while excluding many schwer flints (SF). A fluor
objective transmits well in the UV; consequently, a fluor objective may also
imply application to fluorescence.
The magnifications of the following objectives are based on a 200-mm tube
lens, which is a standard tube lens for Nikon microscopes. An Olympus scope
employs a 180-mm focal length as its tube lens.
ΝA I ΝA O
= , (12.1)
nI nO
i
Aplanat is derived from the Greek a–plan-etes. a-, meaning not; plan, meaning moving; and etes,
meaning star. However, an aplanat does not transform a star into a planet during an exposure.
113
114 Chapter 12
Figure 12.1 Aplanatic surface of the scaled-divergence kind. The NA is scaled by the
refractive index between the object and the image. The lens stop is proximal to the image.
where NAI is the NA of the image, nI is the refractive index of the image, NAO is
the NA of the object, and nO is the refractive index of the object.
Figure 12.1 displays a single aplanatic surface of the scaled-divergence kind.
This eliminates the spherical aberration. The divergence within the glass
borosilicate crown (BK7) is roughly 1.5 times that of air. Proper placement of the
lens stop near the image conjugate also eliminates coma. The image field is
curved. The aplanatic surface is free of both spherical aberration and coma.
In Fig. 12.2, the addition of a meniscus defines two more aplanatic surfaces.
The first and third surfaces S1 and S3 are aplanatic due to scaling of divergence
by the refractive index. The second surface S2 is aplanatic due to concentric
image conjugates of the surface. Once again, proper location of the lens stop is
required for elimination of coma, and the object field is curved.
Figure 12.2 Aplanatic front end. First and third surfaces S1 and S3 define aplanatic
surfaces of the scaled-divergence kind. The second surface S2 defines an aplanatic
surface of the concentric kind.
There are two distinct lens groups. The first group resembles a single Gauss:
a biconvex singlet and meniscus doublet. The meniscus lens is shaped for
management of spherical aberration, coma, lateral color, and Petzval curvature.
The second group is a doublet: it manages the flange focal distance and the
residual aberrations of the first group.
The lens employs super-schwer crown (SSK), lanthanum schwer flint
(LaSF), and schwer flint (SF). The SSK glass has a refractive index of
approximately 1.6; the LaSF and SF have a large refractive index at 1.8.
Performance in the blue is compromised for two reasons: the partial dispersion
and absorption in the blue spectrum. Both limitations originate in the SFs.
This lens functions extremely well for human vision, although its
performance in the blue compromises electronic vision.
Figure 12.3 10X plan achromat at 0.25 NA. NAP = 0.25 is derived from a 5.0-mm entrance
pupil and a 20-mm EFL. Prescription by Fukutake.21
An NA of 0.75 indicates an Airy radius of 0.5 μm at 588 nm. The Gaussian depth
is 1.9 μm. The edge spread displays a high-contrast transition over 0.3 μm. The
SCE is 8.7% in water.
The ray-intercept plot indicates several key features. The lens is focused for
the d line. There is a small amount of spherical aberration at the margin, which is
likely clipped in application. The d and F lines are effectively corrected with each
other. The lens is an achromat, even though the patent specifies a
semiapochromat. The lens is fairly corrected for the C, d, and F lines, because
they all lie within an axial range of 3 μm. However, the g line (436 nm) displays
significant axial color at 9 μm. Perhaps in the current lens, semiapochromat
indicates correction for three wavelengths within a tolerance, but not a fourth.
There are three distinct groups of the lens, and they each serve a primary
purpose. Optimization of the prescription may require a small deviation from the
group’s primary role.
The first group resembles an aplanatic front end. The first surface is an
aplanatic surface of the concentric kind. The second surface is an aplanatic
surface of the scaled-divergence kind. This nearly hemispheric lens employs a
high-index lanthanum flint. The third surface is an aplanatic surface of the
concentric kind, and the fifth surface is an aplanatic surface of the scaled-
divergence kind. The third through fifth surfaces define an aplanatic doublet.
Objective Lenses 117
Figure 12.4 40X fluor at 0.75 NA. NAP = 0.75 is derived from a 7.5-mm entrance pupil and
5-mm EFL. Prescription by Misawa.22
The second group resembles a single Gauss, where the doublet is a triplet.
The positive elements are all long-spectrum fluorite krone glass: FK5 and FK56
provide a low index and low dispersion. The low index limits the NA of the
objective, while the low dispersion reduces lateral color.
The third group defines a negative element for extension of track length
beyond the focal length. The distance from lens stop to object should be 60 mm,
while the effective focal length is 5 mm. This configuration requires a strong
negative element at the lens stop. It is somewhat aplanatic with respect to the lens
stop.
Figure 12.5 60X immersion lens. Rays indicate an NAP as 1.4. NAM is 1.2 and NAC is
approximately 1.0. Part (a) displays 8 lens groups and 15 lens elements. Part (b) displays
group 8 comprising: a nearly hemispheric surface (HS), an oil immersion, a cover glass,
and water as the object medium. Prescription by Yamaguchi.23
mm thick. The working distance between the lens and cover is 0.15 mm. The
object is located in water on the back side of the cover. The object may also be
located within a binder.
The 60X immersion lens is suitable for TIRF. The marginal ray (MR) at 70.2
deg is beyond the critical angle of 60.7 deg at the cover-to-water interface. This
enables an evanescent field with a < 100-nm depth into the water. Small
molecules may bond to the back surface of the cover. The evanescent field
excites the surface-bound molecules without excitation of the bulk liquid.
The 60X TIRF lens employs a sequence of four aplanats at the object. The
first aplanat comprises a doublet of oil and lanthanum schwer flint (LaSF35). The
convex surface of oil is an aplanatic surface of the concentric kind. The large
index of LaSF35 at 2.02 reduces the exiting NA and reduces the spherical
aberration. The convex surface of the LaSF35 is an aplanatic surface of the
scaled-divergence kind. Three of the aplanats employ a combination of a long-
spectrum krone CaF2 and a short flint KzFH1. The combination of calcium
fluoride and lead borate is a common method for color correction in the blue. A
short flint from 2009 may be comprised of neodymium and silicate. These four
aplanats gradually bend the marginal rays inward towards the optical axis.
At the back of the lens, there are two meniscus doublets. The opposing
concave surfaces create a powerful negative lens. Their proper alignment is very
difficult to attain. However, their negative power is essential for maintenance of
flange focal length and compensation for aberrations of positive aplanats.
Figure 12.6 displays a report for the 60X TIRF lens at 1.4 NA. The ray-
intercept plot displays a large spherical aberration of 18 μm at the margin for the
d line. The marginal ray angle at 70.2 deg within the cover specifies a marginal
NA at 1.23, which is far below the NA. The encircled-energy plot indicates a
central peak within 0.4 μm and a broad base beyond 5 μm. Also within the
encircled-energy plot, the flat of the 0.1-mm field occurs at 0.4 μm, while the flat
of the diffraction limit is at 0.25 μm. An Airy diameter of 0.8 μm at 588 nm
Objective Lenses 119
Figure 12.6 60X immersion lens at 1.4 NA. NAP = 1.4 is derived from a 9.6-mm entrance
pupil and a 3.37-mm EFL. NAM = 1.23. NAC = 0.90. Edge spread is at the d line and 0.1-
mm field. Prescription by Yamaguchi.23
indicates a central NA of 0.90. The edge spread displays a sharp edge with poor
contrast. The edge rises quickly over 0.2 μm, while the tails extend beyond 5 μm.
Figure 12.7 displays a report for the 60X TIRF lens at 1.0 NA. The ray-
intercept plot displays a small spherical aberration of 2 μm at the margin for the d
line. The axial color indicates < 3 μm of axial shift. The marginal ray angle at
40.7 deg within the cover specifies a marginal NA at 0.93, which is close to the
paraxial NA. The Gaussian depth of focus is 0.43 μm at 588 nm. The encircled-
energy plot indicates a central peak within 0.3 μm without a broad base. Also
within the encircled-energy plot, the flat of the 0.1-mm field is nonexistant, while
the flat of the diffraction limit is also at 0.35 mm. An Airy diameter of 0.8 μm at
588 nm indicates a central NA of 0.9. The edge spread displays a sharp edge with
excellent contrast. The edge rises quickly over 0.2 μm with very little tail. Figure
12.8 displays the SCE by spot radius of the 60X immersion lens. The SCE plot is
an encircled plot, which is scaled by spherical collection efficiency.
The SCE for 0.7 NA is quite different from the SCEs of 1.0 NA and 1.4 NA.
The SCE at 0.7 NA indicates a different central peak and a much different
magnitude. The flat indicates an Airy radius at 0.45 μm. The maximum
magnitude is 0.07. The area of the central peak is nearly twice that of 1.0 NA.
120 Chapter 12
Figure 12.7 60X immersion lens at 1.0 NA. NAP = 1.0 is derived from a 6.7-mm entrance
pupil and a 3.37-mm EFL at the d line. NAM = 0.93. NAC = 0.9. Prescription by
Yamaguchi.23
Figure 12.8 SCE of a 60X immersion lens. The SCE is plotted versus radial position
within the point spread. The SCE plot is an encircled-energy plot from ZEMAX which is
scaled by the SCE. The encircled-energy plot occurs in cover glass (n = 1.52). Spherical
collection occurs in water (n = 1.33). Paraxial NAs at 1.4, 1.0, and 0.7, respectively.
Marginal NAs at 1.2, 0.9, and 0.7, respectively.
Objective Lenses 121
The spherical collection is nearly half that of 1.0 NA. Consequently, the
irradiance of the central peak at 0.7 NA is nearly one-quarter that of 1.0 NA.
Increasing the NA greatly increases the irradiance of the point spread. However,
this trend is not always true. At some point the increased NA might direct more
light into a broad skirt without increasing the peak irradiance.
The SCEs at NAs of 1.0 and 1.4 are similar at small radii, but much different
at large radii. The SCE for 1.4 NA is slightly larger that of 1.0 NA from 0–0.3
μm. This indicates a common central peak in the point spread. However, the SCE
for 1.0 NA remains flat beyond 1 μm, while the SCE for 1.4 NA grows steadily
until 4 μm. This indicates a broad skirt in the point spread for 1.4 NA, which is
absent in the point spread for 1.0 NA. The maximum SCE for 1.4 NA is 0.31,
and the maximum SCE for 1.0 NA is 0.14. The similarity at small radii is due to
shared central NA where the lens is diffraction limited. The additional annulus of
the 1.4 NA does not tighten the spot because the wavefront of the annulus has
spherical aberration.
In combination with a tube lens at 200-mm focal length, the 60X objective
creates a 21-μm radius for the central peak at both 1.4 and 1.0 NA. The skirt of
1.0 NA extends to a 60-μm radius, while the skirt of the 1.4 NA extends to a 240-
μm radius. At 8 μm per pixel, the skirt of the 1.4 NA extends to a radius of 30
pixels. The central peak of both extends to a radius of 3 pixels. The central peak
is 5 pixels wide, the skirt for the 1.0 NA is 15 pixels wide, and the skirt for the
1.4 NA is 60 pixels wide.
Half of the light collected by the 1.4 NA is directed into the background of
the image. The shot noise of the skirt is nearly equal to that of the central peak.
The skirt noise of a single point spread is spread over many pixels. It might not
be above the read noise of the sensor. It might not be detected in a single point
spread. However, the skirt noise of multiple point spreads can be significant. The
contrast of a central peak with background can be greatly reduced by the
summation of multiple skirts. Increasing the NA does not always improve
contrast.
Figure 12.9 100X aplanat at 1.0 NA. NAP = 1.3 is derived from a 3.5-mm entrance pupil
and a 1.8-mm EFL at the d line. Adapted from Smith.24
In Fig. 12.9, the central NA is 1.0. The on-axis point displays a small fifth-
order spherical aberration. This is caused by small differences in refractive index
between the sphere BK7, the oil TYPE A, and the cover K7. These small changes
in index at plano interfaces create spherical aberration. In Fig. 12.10, the paraxial
NA is 1.3. The fifth-order spherical aberration is large.
Figure 12.10 100X aplanat at 1.3 NA. NAP = 1.3 is derived from a 4.5-mm entrance pupil
and a 1.8-mm EFL at the d line. Adapted from Smith.24
arcsin ( ΝA M n ) 2 arcsin ( ΝA C n )
η AC = sin 2 − sin . (12.2)
2 2
Figure 12.11 10X Schwarzschild at 0.25 NA. NAM = 0.25 is derived from a 10.0-mm
entrance pupil and a 20-mm EFL. NAC = 0.117 is derived from a 10-mm entrance pupil
and a 44.7-mm distance from convex mirror to field.
Figure 12.12 20X solid parabola at 1.00 NAP. NAM = 1.00 is derived from a 30-mm
entrance pupil and a 10-mm EFL.
Chapter 13
Tube Elements
13.1 Doublet Tube Lens
A stock 200-mm doublet may serve effectively as a tube lens as shown in Fig.
13.1. The performance on axis is diffraction limited. At a 6.0-mm image field,
there are several aberrations. The ray intercepts of the x plane indicate defocus in
the form of Petzval curvature. The ray intercepts of the y plane indicate
astigmatism and coma. The bulk of the aberration is field curvature.
Consequently, the production doublet is effective within a small field with a
CCD sensor.
A custom 200-mm doublet may provide a tube lens with flat field (Fig. 13.2).
The performance on axis is diffraction limited. At a 6.0-mm image field, there is
no field curvature. However, the ray intercepts of the y plane indicate a small
coma. The encircled-energy plot indicates nearly diffraction-limited
performance. A telecentric lens stop is essential to this design. The custom
doublet is an effective design for a CCD sensor with a 12-mm diagonal.
127
128 Chapter 13
Figure 13.1 Stock doublet acts as a 200-mm tube lens. Lens stop is 10 mm in diameter. A
telecentric lens stop is created by placement of a lens stop at the front focal point.
Figure 13.3 Doublet-pair tube lens layout. A custom doublet acts as a 200-mm tube lens.
The lens stop is 10 mm in diameter. A telecentric lens stop is created by placement of a
lens stop at the front focal point.
The doublet pair based on the Abbe number (shown in Fig. 13.4) may be
considered an achromat for the d and g lines. Figure 13.5 displays the axial color
of the doublet pair. The “U shape” indicates complete correction for two
wavelengths. However, the plot does not display the “S shape” of an apochromat,
where a vertical line indicates three corrected wavelengths. The lens is certainly
an achromat; however, it is not apochromatic. The doublet pair might be called a
semiapochromat because it is substantially corrected for three wavelengths.
Implementation of real glass from the 1990s yields improved performance of
the doublet pair as shown in Fig. 13.6. The chromatic correction is greatly
improved by application of known glass types to the prescription. The g line
displays less lateral color. However, there is a cost to correct lateral color. The
lanthanum flint LaFN7 and the short-flint special KzSFN4 are highly reactive
with the atmosphere and cleaning agents. The schwer krone SK10, the barium
schwer flint BaSF4, and the short-flint special KzSFN4 are obsolete as of 2010.
Implementation of this design requires new glass types along with new values for
radius and thickness. See Chapters 17 through 19 for additional information on
glass types and correction of lateral color.
The doublet pair with real glass in Fig. 13.6 should be considered an
achromat. Figure 13.7 displays the axial color of the doublet pair with real glass.
The lens with real glass is barely an achromat. However, the doublet pair may be
called a semiapochromat because it is substantially corrected for three
wavelengths.
λF
λ′F = , (13.1)
cos θ
Figure 13.4 Doublet-pair tube lens based on the Abbe number. The g line indicates lateral
color. Glass is based on numeric values of the refractive index and the Abbe number at
the d line.
Figure 13.5 Axial color of a doublet-pair tube lens based on the Abbe number. A custom
doublet acts as a 200-mm tube lens. The “U shape” indicates an achromat.
Tube Elements 131
Figure 13.6 Doublet-pair tube lens based on real glass. Application of real glass yields
better color correction. However, all but one of the glass types is obsolete as of 2010.
Figure 13.7 Axial color of a doublet-pair tube lens based on real glass. A custom doublet
acts as a 200-mm tube lens. The “U shape” indicates an achromat.
132 Chapter 13
Filter cubes employ thin 1.1-mm thick beamsplitters that reduce the
displacement of the beam to < 1 mm. However, they are notorious for warping.
The surface tension of the dielectric stack may deform a round filter into a
spherical surface. However, surface tension frequently deforms a rectangular
filter far beyond a sphere. The effects of deformation are small in transmission,
but huge in reflection. A flatness specification is warranted for a filter, especially
when the reflection of a filter is part of the imaging system.
A colored-glass filter employs absorption for transmission of long
wavelengths. A colored-glass filter is independent from angle of incidence.
However, colored-glass filters do emit fluorescence: absorption of a green laser
beam by a colored-glass filter may create an orange emission from the filter.
A hard filter is comprised exclusively of metal oxides on a silica substrate.
Numerous layers define the shape of the transmission spectrum. They are
extremely durable during exposure to the atmosphere. Hard filters are a
development from wavelength multiplexing in fiber-optic communications. The
dielectric films are deposited under vacuum on a large substrate and then cut into
smaller sizes.
A soft filter comprises two filters. The first filter is a short dielectric stack on
the first substrate. The first filter provides multiple peaks in transmission. The
second filter is a colored glass that absorbs the unwanted peaks in transmission.
Absorption by the second filter frequently converts to fluorescence. The first and
second filters are bonded to each other inside a ring, which provides a barrier
against attack by the atmosphere. A soft filter may have a significant wedge that
shifts the image location. There is a preferred direction of travel in a soft filter,
because the dielectric filter should be the incident filter. Otherwise, the
absorption filter encounters excess light, which promotes damage to the
absorption filter.
Neutral density (ND) filters come in two types. An adsorptive ND filter
absorbs light throughout the volume of the filter. It appears gray or black. A
reflective ND filter employs a thin film of inconel for both reflection and
absorption. Inconel is an alloy that is extremely resistant to oxidation and
corrosion. Its primary composition is nickel (72%), chrome (15%), and iron
(10%).
Filters are normally specified by optical density (OD), as follows:
OD = − log10T , (13.2)
Figure 13.8 Filter doublet. An absorbance indicates an absorption filter without reflection
(A). R indicates a reflection filter without absorption. Light within a high-reflectance cavity
has equal probability of exiting through either filter.
Figure 13.8 displays a filter doublet wherein light may circulate in the cavity
between the filters. An absorption filter is described by absorbance A, while a
reflection filter is described by reflectance R. A sequence of two absorption
filters yields the square of the transmittance values as the total transmittance.
Consequently, their optical densities add to the total optical density. A sequence
of two reflection filters yields far more than the square of the transmittance
values. Addition of the second filter cuts the transmittance in half. Consequently,
the optical densities of two reflective filters do not add to the total optical
density. They might even disrupt each other if the separation is less than the
coherence length of the transmitted spectrum.
Figure 13.9 Beamsplitting cube within a finite conjugate distance. The cube consists of 50
mm of silica. The polychromatic Strehl ratio is 90%. A perfect lens is defined by a 10-mm
lens stop and a 200-mm EFL, and NAP = 0.025. Exception from other figures: encircled
energy applies to a polychromatic combination of F, d, and C lines.
1 − sin 2 θ
ΔyP = d P sin θ 1 − . (13.3)
n 2 − sin 2 θ
In fused silica at 45 deg, the lateral displacement is 0.32 times the plate
thickness. A 3.0-mm thickness creates a 1.0-mm beam shift, while a 1.1-mm
thickness creates a 0.4-mm beam shift.
In Fig. 13.11, a tilted filter at 3.0 mm in thickness is located within a tube of
an infinitely distant conjugate. A warp radius of 580 mm creates an astigmatism
at a Strehl ratio of 0.9. This represents a peak wavefront error of 0.40λ within a
10-mm lens stop.
Tube Elements 135
Figure 13.10 Plate tilted within a finite conjugate distance. A parabolic reflector defines
the tube lens as a 10-mm lens stop and a 200-mm EFL. The plate at a 45-deg tilt consists
of 1.4 mm of silica. The Strehl ratio of the d line is 90%. A perfect lens is defined by a 10-
mm lens stop and a 200-mm EFL, and the NAP = 0.025.
Figure 13.11 Warped plate at 3.0-mm thickness with an infinity correction. The warped
plate at 45-deg tilt consists of 3.0 mm of silica. A 580-mm radius of curvature is derived
from a Strehl ratio of the d line at 90%.
Tube Elements 137
Figure 13.12 Plate at 1.1-mm thickness within an infinity correction. The warped plate at
45-deg tilt consists of 1.4 mm of silica. A 350-mm radius of curvature is derived from a
Strehl ratio of the d line at 90%. A tube lens is a parabolic reflector with a 10-mm lens
stop, 200-mm EFL, and NAP = 0.025.
Chapter 14
Ocular Lenses
14.1 Eyepiece
An eyepiece is a magnifier with its entrance pupil defined by the lens stop of an
objective lens. It is also known as an ocular lens. A typical ocular has a focal
length of 25 mm, which is one-tenth of the near point of human vision at 250
mm. An image conjugate of the tube lens serves as the object of an ocular. The
object is located at the front focal point of the eyepiece. The angular size of the
image is 10 times greater than the angular size of the object at the standard near
point. Consequently, the angular magnification of a typical eyepiece is 10X. The
angular magnification of an arbitrary eyepiece is defined by Eqs. (2.7) and (3.27).
14.2 Pupils
The entrance pupil of an eyepiece is defined by the lens stop of the objective
lens. In a system with finite tube length, the object NA is defined by the diameter
of the objective lens stop and the length of the tube. In a system with infinite tube
length, a tube lens creates a distant image of the objective lens stop, and the
object NA is defined by the diameter of the lens stop and the focal length of the
tube lens.
The exit pupil of an eyepiece is an image of the entrance pupil, which is the
lens stop. During proper illumination, the exit pupil appears as a bright white
disk floating above the eyepiece. The exit pupil should fit within the pupil of a
human eye. The distance from the last surface of the ocular to the exit pupil is the
eye relief.
The eye relief is an important functional parameter. At short distances of 10
to 15 mm, the eye relief prevents contact with eyelashes. At longer distances of
25 to 30 mm, the eye relief provides space for eyeglasses. A flexible eye cup on
the ocular acts as a shield from room light for an operator without eyeglasses.
The eye cup is folded backward along the ocular for operators with eyeglasses.
The diameter of the exit pupil defines an artificial pupil for the operator’s
eye. At small pupil values of 1.25 mm, the human eye is diffraction limited: this
is true even for people with minor astigmatism. This artificial pupil provides a
significant advantage over the natural pupil of 2.5 mm at which the eye is
139
140 Chapter 14
aberration limited. Proper room light is required for dilation to a natural size of
2.5 mm.
The field stop of the ocular is placed at an image field of the tube. The field
stop of the ocular defines the vision field at the specimen. An image of the field
stop may be projected onto the vision field. The size of the field stop is
dependent on the type of ocular lens. The diameter of the field stop can vary from
15 mm in a Kellner ocular to 25 mm in an Erfle ocular.
In a microscope of finite tube length in 1980, an image is located at 160 mm
from the objective flange—this defines a tube length of 160 mm with an image
located at its end. The field stop of the ocular is located at the end of the tube. A
field stop of 22 mm defines a chief ray angle of 3.9 deg in an eyepiece of
25-mm EFL. Beyond this angle, the image quality becomes more difficult to
maintain. Consequently, the lens stop of a microscope of finite tube length is
typically 22 mm or less.
In a microscope with infinity correction, a 10-mm lens stop and a 200-mm
tube lens create a tube NA of 0.025. The field stop of the ocular is located at the
back focal point of the tube lens.
Figure 14.1 Kellner ocular at a finite distance to the lens stop. The lens stop (LS) is 8 mm
in diameter. The tube length is 160 mm. The object NA is 0.025. The field stop (FS) is 15
mm in diameter. The exit pupil (EP) is 1.6 mm in diameter at an eye relief of 15.5 mm. the
field of the image is 17 deg. The field lens (FL) is a standard plano-convex lens at 50 mm
in focal length. The magnifier (M) is a stock doublet at 30 mm in focal length. The EFL is
25.0 mm at the d line. The angular magnification is 10X the near-point view.
Ocular Lenses 141
Figure 14.2 Kellner lens report. Wavelengths are at the F, d, and C lines. Object height is
7.5 mm in the lens report. Maximum field diameter is 15.0 mm.
Figure 14.3 Plössl lens report. The lens stop is 50 mm in diameter at 1000 mm from the
field stop. The object NA is 0.025. The exit pupil diameter is 2.0 mm at an eye relief of
19.0 mm. Doublets are identical stock products at 50 mm in focal length. The EFL of the
doublet pair is 26.6 mm at the d line. The angular magnification is 9.4 times the near-point
view. Object height is 9.0 mm in the lens report. Maximum field diameter is 25.0 mm.
Figure 14.4 Erfle lens of 1923. The lens stop is 10 mm in diameter at 200 mm from the
field stop. The object NA is 0.025. The exit pupil diameter is 2.3 mm at an eye relief of
18.7 mm. The elements are custom to the design. The EFL of the doublet pair is 25.2 mm
at the d line. The angular magnification is 9.9X the near-point view. Object height is 9.0
mm in the lens report. Maximum field diameter is 25.0 mm.
The Erfle lens of 1923 is aberration limited. The collinear ray-intercept plots
of the x plane indicate near perfection on axis. The flat ray-intercept plots of the x
plane indicate no field curvature. The ray-intercept plots of the y plane indicate
astigmatism. The encircled-energy plot indicates a spot radius of 3 mrad. The
line-spread plot indicates a line width of 4 mrad.
The Erfle lens of 1997 employs glass from the upper region of the glass map,
such as schwer flint (SF), schwer krone (SK), and lanthanum krone (LaK). The
refractive indices greatly exceed 1.62. Consequently, the element curvatures are
less steep, thus reducing astigmatism. The dispersion exceeds 36. Consequently,
there is improved color correction at the field margin. A negative relative partial
dispersion ΔPgF of the lanthanum krone LaK8 provides correction of color in the
blue. Additional information on glass types is found in chapters 17 through 19.
The Erfle lens of 1997 is nearly diffraction limited. The collinear ray-
intercept plots of the x plane indicate near perfection on axis. The sloped ray-
intercept plots of the x plane indicate a small field curvature. The ray intercept
plots of the y plane indicate small lateral color. The difference in slopes between
the x and y planes indicates a small astigmatism. The astigmatism and lateral
144 Chapter 14
Figure 14.5 Erfle lens of 1997. The lens stop is 35 mm in diameter at 200 mm from the
field stop. The object NA is 0.25 telecentric. The exit pupil (EP) is 2.1 mm in diameter at
an eye relief of 18.8 mm. The field doublet (FD) and the pupil doublet (PD) are custom
doublets. The middle singlet (MS) is a custom biconvex singlet. The EFL of the lens
system is 29.0 mm at the d line. The angular magnification is 10.0 times the near-point
view. Object height is 9.0 mm in the lens report. Maximum field diameter is 25.0 mm.
color are balanced in magnitude. The lens is substantially optimized. The flat of
the encircled-energy plot indicates a spot radius of 1.0 mrad. The line-spread plot
indicates a line width of 0.4 mrad.
The pupil doublet and the middle singlet contribute most of the optical
power. The field doublet has little effect on the angle of the chief ray. At 9.0 mm
in the object, the first doublet bends the chief ray by < 1 deg. The pupil doublet
and the middle singlet contribute negative astigmatism due to their positive
powers. The pupil doublet is substantially corrected for lateral color, while the
middle singlet adds negative lateral color.
The field doublet effectively counters the aberrations of the pupil doublet and
middle singlet. The biconcave flint of the field doublet creates a large positive
lateral color. The steep convex surface of the field doublet creates a large angle
of incidence for a chief ray. Consequently, the steep convex surface of the field
doublet creates a positive astigmatism.
The distortion of the Erfle 1997 eyepiece is displayed in Fig. 14.7. A square
box in the object field appears as a pincushion in the image field. This represents
positive distortion that is caused by a negative growth in focal length with field
Ocular Lenses 145
height. The shorter focal length of the margin creates a greater magnification at
the margin. A linear feature of the object is curved in the image field. An
addition of a negative field singlet may reduce positive distortion.
Most of today’s eyepieces are derivatives of the Erfle eyepiece. A Skidmore
eyepiece splits the middle single into two singlets. An aspheric field lens may
completely eliminate field curvature or distortion.
Figure 14.7 Grid distortion for the Erfle lens of 1997. The pincushion distortion is a
positive distortion of 6.3% between the object and image. Wavelength is at the d line.
Object height is 9.0 mm.
Chapter 15
Sensors
15.1 CCD Sensors
A CCD sensor is a charge-coupled device. Potential wells for electrons are
created by extrinsic doping of a semiconductor. The metal-oxide gate of a field-
effect transistor determines the depth of a well. An external voltage may raise or
lower a gate. A specific gate sequence transfers electrons between wells. The
charge-coupling process converts photoelectrons into a video signal. Holst and
Lomheim,33 provide a broad review of CCD and complementary metal-oxide
semiconductor (CMOS) sensors. Janesick34 provides a more rigorous review of
CCD technology.
Figure 15.1 displays the structure of a potential well of a CCD sensor. An n-
type material donates negatively charged electrons. A p-type material donates
positively charged holes. The bulk material is p-type silicon. The Fermi level
defines an equal probability for a hole and an electron. n-implantation raises the
Fermi level by donation of electrons. Consequently, the conduction-band edge is
lower in the n-doped region. This defines the base of the well. The full-well
Figure 15.1 Potential well of a CCD. Photon absorption promotes electrons (filled circles)
from valence band to conduction band. N-doping of bulk p-substrate creates a potential
well for photoelectrons. Shallow p-doping isolates the potential well from surface states. A
buried channel is defined by deep n-implantation and shallow p-implantation.
147
148 Chapter 15
due to a longer temporal integration. The data and frame rates should be chosen
wisely with regard to the application.
A full-frame transfer device requires a CCD array with two adjacent frames
on the same chip. A bright frame is exposed to the image. A dark frame is buried
beneath an opaque shield. A full frame is transferred from the bright frame to the
dark frame in approximately 1000 data cycles. A data cycle is 0.025 ms at 40
MHz. A full-frame transfer to the video signal requires one million data cycles,
which is 25 ms. Additional photoelectrons are collected in the bright frame
during frame transfer to the dark frame. A bright spot during frame transfer can
smear into a dark background.
An interline-frame transfer device requires an array of bright and dark
columns. A bright column is exposed to the image during integration. A dark
column is buried beneath an opaque shield. A bright column transfers charge to a
dark column in one data cycle. The dark column is transferred to the video signal
while the bright column collects more light. A progressive scan delivers an entire
frame to the video signal in a sequence of contiguous rows during one million
data cycles, or 25 ms. A progressive scan may employ dual outputs toward a
double frame rate. An interlaced scan delivers half of the frame during 0.5
million data cycles, or 13 ms. However, there is a delay of 13 ms between the
odd and even rows. Consequently, a rapidly moving feature may not correlate
properly between odd and even rows.
An interline-transfer CDD might employ a microlens as shown in Fig. 15.3.
The microlens is spherical or cylindrical. Its shape is determined by the surface
tension of a polymer during solidification. A microlens collects light over the
entire pixel. A spherical lens directs light from a lens stop into a spot on the full-
frame sensor. A cylindrical microlens directs light from a lens stop into a bright
column of an interline sensor. The microlens of Fig. 15.3 may increase the
quantum efficiency of an interline sensor from 10 to 40%. The projected lens
stop of the microlens is defined by a distant image of the bright column.
Consequently, the microlens is telecentric. An F/2.8 microlens defines a half
angle of collection at 10 deg. Many wide field lenses cannot accommodate this
telecentric acceptance angle.
Figure 15.3 Microlens (ML) of a CCD. The microlens is centered over the bright column
(BC). Dark columns (DC) are located beneath dark shields (DS). Marginal rays (MR) from
the lens stop (not shown) are directed onto the bright column.
Sensors 151
Figure 15.4 Circuitry of an active pixel sensor (APS). An APS contains a photodiode (PD)
and three transistors. The signal is delivered directly to the video signal. Drive voltage VD
sends current through the sense FET and load resistor RL. The reset gate restores the
sense node to the reference voltage VR.
Figure 15.5 Potential well of a CMOS detector. Photon absorption promotes electrons
(filled circles) from valence band to conduction band. N-implantation of the bulk p-
substrate creates a potential well for photoelectrons. The shallow well is exposed to
surface states. CMOS foundries do not typically provide deep n-implantation or shallow p-
implantation.
Figure 15.6 PMT circuit with components: photocathode (PC), dynode (D), dynode
resistor (RD), anode (A), anode capacitor (CA), load resistor (RL), and high voltage (HV)
(500–800 V).
Q = Φ I ηQ g D τ I , (15.1)
Q −t
V= exp , (15.2)
CA RL C A
where CA is the anode capacitance and RL is the load resistance across the anode
capacitor. A second load resistor may be added in parallel to the first for
increased speed by addition of a second discharge path.
A reflection-mode PMT requires a transparent widow for passage of photons
into the vacuum and on the reflection-mode photocathode. The electrons are
excited near the surface where a strong electric field drives them away from the
photocathode toward the first dynode. There is little chance for an electron to
relax to a bound state within a reflection-mode PMT. The spatial response of a
reflection-mode photocathode is very nonuniform. There is a strip of maximum
quantum efficiency at the side of the cathode in proximity to the first dynode.
A transmission photocathode is a thin film on the inside of silica window.
The photoelectrons must travel through the film before entering the vacuum.
Consequently, there is significant opportunity for relaxation to bound states
within the photocathode. The quantum efficiency is compromised by the
154 Chapter 15
15.4 Film
Photographic film employs grains of silver halide (AgBr, AgCl, AgI), which
convert photons into metallic silver. This process has three main steps. First a
photon is converted into a valence electron with mobility in the grain. Second, an
excited electron falls into a trap as an invisible record of photon absorption.
Third, a developer converts the excited silver halide into colloidal metallic silver.
Silver displays one of the largest intrinsic reflectance of any metal within the
visible wavelength regime. An interpolation between 2.0 and 2.5 eV estimates
the refractive index as 0.263 + i3.94 at the d line (2.11 eV). The magnitude of the
complex vector is 3.95. Within air at index of 1.00, this yields a reflectance of
94% at a maximum absorbance of 6%. Within an emulsion at an index of 1.50,
this yields a reflectance of 92% at a maximum absorbance of 8%. Most of the
optical density is due to reflectance. Consequently, the generation of heat is
minimized.
Figure 15.7 displays an exposure curve for a monochrome film for visible
photography. Table 15.1 displays specific parameters. The 400-speed film has a
3.7-μm grain, while the 100-speed film has a 7.5-μm grain. The 400-speed film
responds to a lower exposure as measured in fluence (Talbots per area).
However, the 400-speed film has a larger dark threshold. Both films exhibit the
same dark threshold at 230 photons per crystal. The 100-speed film exhibits
better contrast with shot noise because 4X as many photons are required for the
same optical density. At a 4X photon count, the contrast with shot noise is 2X
greater [Eq. (8.6)]. In terms of decibels, at a specific OD, the T-100 film requires
6 dB more photons toward a 3-dB greater contrast with shot noise.
The marginal NA of the 400-speed film nearly matches that of a typical tube
lens, 0.025. Consequently, the 400-speed film is optimized for microscopy.
However, as mentioned earlier, the larger pixel of the 100-speed films creates
better contrast with shot noise.
Frequency data are measured from modulation transfer curves of the Kodak
specifications for T-MAX film.37 The marginal NA is derived from the cutoff
frequency in Eq. (19.37), and the Gaussian NA is derived from Eq. (5.49).
Chapter 16
Human Vision
16.1 Physiology
There are three basic components of human vision: the point spread of the lens,
the lateral inhibition of the retina, and the saccation of the eye. Each component
is described by a MTF, which acts on the irradiance. The physiology of the retina
includes rods, cones, horizontal cells, bipolar cells, amacrine cells, and ganglion
cells.38
The human eye evolved in numerous steps.39 The eye began as a simple
photoreceptor that detected light and shadow. Then, an eye cup created a camerai
with a finite angular field of view. A retina created an image. A fixed lens
sharpened the image. A variable iris controlled brightness. And lastly, a dynamic
lens controlled focus. Even Charles Darwin confessed to such a progression by
natural selection as “absurd.”ii However, Darwin did believe that incremental
improvements could define a progression by natural selection. The intermediate
steps are present within vertebrates of the current day.39
The foveaiii comprises tightly packed cones with very few rods. The absence
of blood vessels and other cells creates a pit that defines the spatial limit of the
fovea. The foveola (the center of the fovea) comprises red, green, and blue cones
without any rods. The annular portion beyond the foveola contains a few rods but
is still largely clear of blood vessels, bipolar cells, amacrine cells, and ganglion.
The current model employs an average cone diameter at 3.8 um. At this diameter,
in a hexagonal packing scheme, the foveola contains 5000 cones within a 200-μm
diameter, while the fovea contains 20,000 photoreceptors within a 400-μm
diameter.40 Within the fovea, there is a single incremental ganglion per
photoreceptor. Beyond the fovea, rods are more common.
The photoreceptors connect to bipolar cells that feed into ganglia. An
incremental bipolar-to-ganglion path responds to an increment of light. Sjostrand
et al.40 calculated three ganglia per foveal cone from experimental quantification
of both. Thus, a single cone within the fovea connects to three ganglia: one
incremental ganglion, one decremental ganglion, and a third type, such as a
parasol ganglion. An incremental bipolar-to-ganglion path responds to an
increment of light. A decremental bipolar-to-ganglion path responds to a
i
A camera is a closed chamber with a hole. From Greek kamera, meaning vault.
ii
See full quotation in Lamb et al.39
iii
Fovea, Latin, meaning pit.
157
158 Chapter 16
decrement of light. The bipolar and ganglion cells of the fovea are laterally
displaced beyond the fovea. The displacement of these cell bodies creates a pit.
Horizontal cells create lateral inhibition from adjacent photoreceptors. The
horizontal cells secrete gamma amino butyric acid (GABA), which inhibits
transduction from the photoreceptors to the bipolar cells.
The periphery is defined by the region beyond the fovea, where blood vessels
and other cells are prevalent. These features of the peripheral retina may scatter
incident light, which degrades the optical point spread. Both cones and horizontal
cells grow larger with distance from the fovea. A receptor pool comprises
multiple receptors with connection to a single ganglion. The effective size of a
peripheral photoreceptor is much larger than a foveal receptor, due to receptor
pooling. The morphology of a peripheral horizontal cell is much different from a
foveal horizontal cell. Numerous features of the periphery degrade spatial
resolution as defined by a point spread of the system.
This model is a practical implementation of transfer functions of the lens,
retina, and saccation. The variety of cone diameters is represented by a Gaussian
point spread. A foveal cone is connected to a single incremental bipolar-to-
ganglion path.
GL ( k ) GR ( k ) GS ( k )
CSF ( k ) = 160 , (16.1)
GL ( k P ) GR ( k P ) GS ( k P )
where k is the spatial frequency, GL(k) is the transform of the lens, GR(k) is the
transform of the retina, GS(k) is the transform of saccation, and kP is the spatial
frequency of the peak contrast sensitivity. Each transform is described in detail in
the subsequent sections.
Figure 16.1 displays the CSFs of three pupil diameters. Each pupil requires a
different radius of saccation for maximum contrast with the lens-point point
spread. Obviously, the artificial pupil displays higher peak frequency than the
natural pupil. Consequently, the artificial pupil creates a sharper image. The exit
pupil of a microscope is an extremely important part of the optical system.
Human Vision 159
Figure 16.1 Contrast sensitivity plot of human vision. The angular diameter of a
photoreceptor (PR) is 0.23 mrad. The angular diameter of a horizontal cell is 13 times that
of the PR at 3.0 mrad. Each plot is identified by a pupil diameter and a saccation radius.
The natural pupil diameter at 2.5 mm employs a saccation radius at 10.1 PR diameters
toward a peak sensitivity at 280 cyc/rad. The artificial pupil diameter at 1.4 mm employs a
saccation radius at 2.7 PR diameters toward a peak sensitivity at 400 cyc/rad. The
artificial pupil diameter at 1.25 mm employs a saccation radius at 3.0 PR diameters toward
a peak sensitivity at 385 cyc/rad.
2 ΝA AP
k AP = f E ( cycles per radian ) , (16.2)
λ
where NAAP is the NA of the artificial pupil and fE is the focal length of the eye.
The artificial NA of a 1.4-mm pupil is 0.042, which indicates a cutoff frequency
of 2444 cyc/rad for the d line. The angular extent of an Airy disk of this lens is
derived from Eqs. (5.19) and (1.2) as
φ Airy λ
β Airy = = 2.44 , (16.3)
fE φ AP
160 Chapter 16
Figure 16.2 Transformations by a lens of human vision. The 2.5-mm pupil is based on the
model of Artal and Navarro.41 The 1.4-mm pupil is based on the Airy pattern of an exit
pupil of a 180-mm tube lens. The 1.25-mm pupil is based on the Airy pattern of an exit
pupil of a 200-mm tube lens.
where φAP is the diameter of the artificial pupil. The angular extent of the Airy
disk is 1.0 mrad (3.5 arcmin) at 1.4 mm and 587 nm. The equivalent Gaussian
diameter is 0.7 mrad.
The transform of an artificial pupil at 1.25 mm defines an 0.037 artificial NA
and a cutoff frequency of 2200 cyc/rad for the d line. The angular extent of the
Airy disk is 1.15 mrad (3.9 arcmin) at 1.25 mm and 587 nm. The equivalent
Gaussian diameter is 0.8 mrad.
The transform of the lens at the natural 2.5-mm pupil is accurately described
by Artal and Navarro.41 Their empirical transform of the natural pupil GNP(k) acts
on flux per angle:
where k is an angular frequency, and the constants of the natural pupil are
defined as follows:
Figure 16.3 Transduction circuit of the retina. Each node represents an electric potential
of a cell. There are two feed-forward paths. The incremental path comprises: a
photoreceptor (PR), an incremental bipolar cell (BInc) with an inverted input, and an
incremental ganglion (GInc). The decremental path comprises: a photoreceptor, a
decremental bipolar cell (BDec), and a decremental ganglion (GDec). The inverted feedback
of the horizontal cell (H) on the center photoreceptor provides lateral inhibition from the
surrounding photoreceptors.
g ′( x ) g ′′( x )
g( x + a) = g( x) − a+ a2
1! 2!
(16.6)
g ′( x ) g ′′( x )
g( x − a) = g( x) + a+ 2
a .
1! 2!
iv
In the field of neuroscience, the incremental path is the “on-center” path, while the decremental
path is the “off-center” path. A negative electric potential of a cell is called “polarization.”
Hyperpolarization increases the magnitude of the negative electric potential across the cell
membrane. Hypopolarization decreases the magnitude of the negative electric potential across the
cell membrane.
162 Chapter 16
g( x − a) + g ( x) + g( x + a)
−g( x) + . (16.7)
3
Combining Eqs. (16.6) and (16.7) reveals a line spread of the retina as
1
g R ( x ) = g ′′( x ) a 2 . (16.8)
3
−4 x 2 −4 x 2
g F ( x ) = exp 2 − exp 2 . (16.9)
β PR βH
where βPR is the full angle of the photoreceptor and βH is the full angle of the
horizontal cell. This equation effectively represents the receptor fields within the
fovea, but not the periphery. The transfer function of the fovea is
−π2β2PR k 2 −π2β2H k 2
GF ( k ) = exp − exp , (16.10)
8 8
−r
PS ( r ) = 1 − exp , (16.11)
αS
−r
g S ( r ) = exp . (16.12)
αS
−x
g S ( x ) = exp . (16.13)
0.6 α S
1
GS ( k ) = . (16.14)
1 + i 2πk ( 0.6 α S )
164 Chapter 16
Figure 16.6 Transformation by saccation of human vision. Each saccation radius has a
specific pupil diameter.
Human Vision 165
Figure 16.7 Contrast-sensitivity plot of human vision in log-log format. The parameters of
the plot are the same as the natural pupil of Fig. 17.1. Peak sensitivity is 160 at 275
cyc/rad for the natural pupil at 2.5 mm. The experimental data is an average of five
subjects. The low-frequency slope of 2 indicates a frequency-squared dependence, which
is a departure from reality. At low frequencies, the experimental slope approaches 1. Data
points were derived from application of a CAD program to a scanned image of De
Valois.47 Theoretical data is plotted at increments of 5 cyc/rad (5, 10, 15… cyc/rad).
1
GRC ( ω) = , (16.15)
1 + iωτ RC
where ω is the temporal frequency and τRC is the time constant of the RC circuit.
A cascade of four similar reactions creates a feed-forward transform
2
1
4
1
GFF ( ω) = = , (16.16)
1 + ( ωτ FF )
2
1 + iωτ FF
2
GFB ( ω ) = 1 − exp ( −iωτ FB ) = 1 − cos ( ωτ FB ) , (16.17)
where τFB is the feedback time constant. The feedback process is governed by
secretion of GABA from the horizonal cell.43 GABA opens anion channels of the
photoreceptor.
Figure 16.8 displays the feed-forward and feedback components of the
temporal CSF. The temporal CSF is effectively modeled as
GFF ( ω) GFB ( ω)
CSF ( ω) = 135 , (16.18)
GFF ( ωP ) GFB ( ωP )
where ωP is the frequency of peak contrast sensitivity at 135. The horizontal cell
feedback defines the low-frequency response, while the photoreceptor feed
forward largely defines the high-frequency response.
Figure 16.9 displays the temporal CSF of the human vision model in this text
and the experimental data of Kelly.44 The lighting for the experimental data at
174 cd/m2 is similar to a computer monitor, which is normally 50–300 cd/m2.
The peak contrast sensitivity at 135 occurs at a temporal frequency of 15 Hz. The
high-frequency limit is near 80 Hz.
The temporal CSF model certainly makes a few broad assumptions.
However, the theoretical model does resemble the experimental data. Ergo, it has
practical value for instrument design.
Human Vision 167
Figure 16.9 Temporal CSF. Peak sensitivity at 135 occurs at 15 cyc/rad for the natural
pupil at 2.5 mm. The feed-forward and feedback time constants are identical at 10.2 ms.
The pupil has a natural diameter of 2.5 mm. Luminance is 175 cd/m2. Experimental data
44
points were derived from application of a CAD program to a scanned image of Kelly. The
theoretical plot occurs at multiples of 1.2 (2.0, 2.4…) cyc/rad.
Chapter 17
Optical Materials
17.1 Glass Types
The term glass implies an amorphous structure. Crystallization is defeated by
either rapid cooling or diversity of components. Quartz is a crystalline form of
silicon dioxide that is formed under intense pressure and heat. Silica is an
amorphous form of silicon dioxide that is formed during rapid solidification.
Glass is largely composed of the nine most common elements within the
earth’s crust (Table 17.1). Additional components of glass are listed in Table
17.2. Iron is not desirable for optical glass due to its green color. Arsenic (As)
and antimony (Sb) are fining agents that remove bubbles and impurities such as
iron. Figure 17.1 displays a periodic table of common elements in metal-oxide
glass.
Silica provides the bulk material for most optical glass. The liquidus
temperature of silica is 1715° C, and the melting point is 2000° C. The liquidus
temperature defines the transition from crystalline to amorphous structure. The
liquidus temperature is also called the glass temperature Tg, above which the
structure is amorphous. The melting point defines the transition from solid to
liquid.
Soda lime is an early form of glass. The liquidus temperature of silica is
reduced to 1000° C by the addition of soda Na2O. The viscosity is reduced by
addition of lime (CaO). Potassium oxide (K2O) may replace soda. A low liquidus
temperature and low viscosity are beneficial for blowing, shaping, and floating.
A trace amount of iron oxide content creates a bluish-green tint, which is
prominent at the edges of soda lime glass. A large amount of iron-oxide content
creates brown bottle glass.
Crown glass was originally formed by a rod with molten glass on the end.
The linear momentum of the rotation stretched the molten glass into a disk, but
not evenly. The process left a crown in the middle. A high transmittance for
windows was the primary goal in crown glass.
The original flint glass was comprised of silica and flint. Flint occurs
naturally as quartz with trace elements. The essential trace elements raise the
refractive index of silica without the addition of color. Naturally occurring flint
provides sparkle without color.
169
170 Chapter 17
Natural forms
Rank Sym Fraction Formula gm/cm3 Name Purpose Name Formula
1 O 0.474
Base
2 Si 0.277 SiO2 2.6 Silica Quartz SiO2
network
3 Al 0.082 Al2O3 4.0 Alumina Stability Sapphire Al2O3
Hematite, Trace
4 Fe 0.041 Fe2O3 5.2 iron (III) element Rouge Fe2O3
oxide with color
Lower
5 Ca 0.041 CaO 3.4 Lime Calcite CaCO3
viscosity
Sodium Lower T
6 Na 0.023 Na2O 2.3 Soda ash Na2CO3
oxide glass
Potassium Lower T
7 K 0.021 K2O 2.4 Pot ash K2CO3
oxide glass
Trace
8 Mg 0.023 MgO 3.6 Magnesia Dolomite MgCa(CO3)2
element
Titania,
Electron
9 Ti 0.006 TiO2 4.2 titanium (IV) Rutile TiO2
density
oxide
Total 0.988
Data from webmineral.com and webelements.com.
Figure 17.1 Periodic table of metal-oxide glass. Thick borders indicate common elements.
Arsenic (As) and antimony (Sb) bind to iron (Fe) in the process of removal.
Lead glass eventually replaced flint glass. The addition of lead oxide raises
the refractive index and lowers the liquidus temperature. A higher refractive
index creates more sparkle. A lower liquidus temperature extends the
temperature range for glass blowing and shaping. Lead is a common heavy metal
because three out of four heavy nuclei decay into a stable form of lead. Lead
glass employs arsenic as a fining agent that removes bubbles and iron.
Ecologically friendly glass is called ecoglass. Ecoglass is considered safe for
the environment due to the absence of lead and arsenic. Titanium oxide has
replaced lead oxide. Antimony has replaced arsenic as the fining agent in a
similar manner to arsenic. Antimony bonds with iron and reduces viscosity, thus
contrubuting to removal of bubbles. However, antimony is also similar in toxicity
to arsenic. Fortunately, antimony is les soluble than arsenic. Arsenic is soluble in
water as an arsenite anion, which is a significant problem in some water supplies.
The shift from lead to titanium was mandated by a directive of the European
Community in 2002. The mandate forbid the sale of electrical products with lead,
mercury, and hexavalent chromium from 2006 onward. The production of lead
glass is still legal, while the sale of an electrical product with lead requires an
exception to the law.
Float glass is derived from pulling molten soda lime glass across a bath of
molten tin. The temperature of the bath is graded from a high to a low
temperature. A solid glass ribbon is pulled off the low temperature end by rollers.
Most plate glass for windows is a form of soda lime float glass with its
characteristic green tint at the edges. Float glass is not appropriate for most
optical instruments due to its color and surface form error.
Commercial borosilicate comprises mostly silica (90%) with small amounts
of boron oxide (3%), sodium oxide (2%), aluminum oxide (2%), and potassium
oxide (1%). Boron is a small atom that bridges dangling bonds within amorphous
glass. Consequently, the coefficient of thermal expansion (CTE) is reduced by
the boron. Glass cookware and labware such as Pyrex® and DURAN® is
borosilicate.
172 Chapter 17
Optical borosilicate crown (BK7) comprises mostly silica (> 60%) with
significant amounts of boron oxide, sodium oxide, and potassium oxide (> 10%
each). There are also small amounts of other materials: barium oxide, zinc oxide,
aluminum oxide, titanium oxide, and antimony oxide. The diversity of metal
oxides promotes amorphous structure and neutral color. However, impurities still
create fluorescence and scattering. D263 by SCHOTT is an extremely pure form
of borosilicate for microscope slides and cover slips. Optical borosilicate crown
is substantially free of iron oxide. N-BK7 is based on titanium and antimony,
while BK7 is based on lead and arsenic.
An extremely pure form of borosilicate BSL7Y employs lead and arsenic
oxide for removal of impurities. The lead reduces viscosity, while the arsenic
removes iron. However, BSL7Y is 10 times more expensive than ecofriendly N-
BK7. Other lead glass types, such as PBM27, are essential for exposure to UV
and x-ray wavelengths. The purity of lead glass with arsenic greatly exceeds the
purity of titanium glass with antimony. Furthermore, lead glass does not
crystallize, while titanium glass does crystallize easily.
Figure 17.2 Glass map for common materials. A diamond indicates accurate values for
both the refractive index and the Abbe number. A circle indicates an accurate refractive
index with an estimated Abbe number. The linear plot of circles is based on water and
TYPE A oil.
17.3 Fluorite
Fluorite glass can involve several materials: calcium fluoride (CaF2), phosphate
krone (PK), and fluorophosphate krone (FK). Phosphate krone and
fluorophosphate krone qualify as glass because they are amorphous. However,
calcium fluoride is not a glass; it is a single crystal. In the field of chemistry,
fluorite indicates calcium fluoride (CaF2); without exception, fluoride indicates
the anion F–, and fluorine indicates the element F. Figure 17.3 displays a periodic
table with common elements of fluorite glass.
The tightly bound electrons of fluorite glass define an absorption band that is
located deep in the UV regime. Consequently, a fluorite glass is effective for UV
excitation during fluorescence. Figure 17.4 displays a glass map of suitable glass
for application to fluorescence.
Calcium fluoride has a refractive index of 1.43 and an Abbe number of 95. It
is located at the far left of the glass curve. It has the same number of 2p electrons
as SiO2. However, the electrons of fluorite are more tightly bound due to the
increased charge of the fluorine nucleus. Consequently, the resonance is shifted
to a higher frequency [Eq. (19.11)] and a shorter wavelength [Eq. (17.1)].
174 Chapter 17
Relative
Type Label Glass name† nd νd λmin†† Λmax†† cost
Crown BK7 Borosilicate krone 1.52 64 330 2000 1
Crown PMMA Polymethylmethacrylate 1.49 57 ~365~ ~1060~ 0
Crown SILICA Fused silica, NIFS-S 1.46 68 ~350~ ~3500~ 5
Crown SILICA Fused silica, NIFS-U 1.46 68 ~250~ ~3500~ 10
Crown SILICA Fused silica, NIFS-A 1.46 68 ~190~ ~3500~ 30
Flint F2 Flint 1.62 36 390 2000 2
Flint SF1 Schwer flint 1.72 30 410 2000 4
Flint SF6 Schwer flint 1.81 25 420 2000 4
Flint SF66 Schwer flint 1.92 21 460 2000 16
Fluor FK51 Fluorophosphate krone 1.48 85 370 2000 26
Fluor LaK8 Lanthanum krone 1.71 54 370 2000 3
Fluor LaF2 Lanthanum flint 1.74 45 390 2000 4
Fluor LaSF9 Lanthanum schwer flint 1.85 32 420 2000 7
Fluor PK51 Phosphate krone 1.53 77 310 2500 27
Fluor PSK53 Phosphate schwer krone 1.55 63 365 2000 7
Fluorite CaF Calcium fluoride - NICF-U 1.43 95 ~225~ ~6000~ 50
Fluorite CaF Calcium fluoride - NICF-A 1.43 95 ~175~ ~6000~ 100
Fluorite CaF Calcium fluoride - NICF-V 1.43 95 ~125~ ~6000~ 400
Fluorite FK5 Fluorophosphate krone 1.49 70 310 2000 2
Fluorite FK51 Fluorophosphate krone 1.49 85 340 2500 18
† German – English: krone – crown; schwer – 1. heavy, 2. dense.
†† >90% at 10 mm thick.
~estimate.
The impurities of natural fluorite emit fluorescence; therein originates the word
fluorescence. Synthetic fluorite (a single crystal of calcium fluoride) offers high
levels of purity without fluorescence.
Calcium fluoride has a similar refractive index to borosilicate, but with a
much higher Abbe number. A positive element of fluorite in combination with a
negative element of short flint is an effective design for color correction in the
blue wavelengths.
Figure 17.4 Glass map of materials acceptable for fluorescence. Suitable glass for
fluorescent applications: nd < 1.70 or νd > 50. The intrinsic fluorescence and/or absorption
of the upper right region is not acceptable in fluorescent applications. Acceptable region
defined by Misawa.22
and 33 times that of fused silica. Fluorophosphate glass is difficult to manage but
well worth the effort.
Figure 17.5 Refractive index of normal and anomalous glass. Glass types are indicated
by name (Abbe number and relative partial dispersion). The flint F2 defines a normal
relative partial dispersion near zero. The dense flint SF2 displays a positive relative partial
dispersion. The short flint KzFH1 displays a negative relative partial dispersion. The
lanthanum crown N-LaK21 displays a large Abbe number and a negative relative partial
dispersion. The parallelograms indicate the slope of the F2 plot.
K λ 2 K 2 λ 2 K 3λ 2
n2 − 1 = 2 1 + 2 + 2 . (17.1).
λ − L1 λ − L2 λ − L3
The normal dispersion of F2 is defined by the first and second resonators. A large
L3 minimizes the effects of the third resonator in the visible regime. The resonant
wavelengths for the first and second oscillators are similar, as indicated by L1 and
L2. The concentrations of the first and second oscillators are indicated by K1 and
K2. SF2 displays a larger concentration of both oscillators by 5 to 10% over F2.
Consequently, SF2 displays a large index. The similar resonant wavelengths
indicate similar dispersion in F2 and SF2.
178 Chapter 17
A2 A3 A4 A5
n 2 = A0 + A1λ 2 + + + + , (17.2)
λ 2 λ 4 λ 6 λ8
i
“Browning” indicates discoloration due to transformation of the glass.
Optical Materials 181
Wavelength
Line (nm) Source
i 365.0 Hg
h 404.7 Hg
g 435.8 Hg
He-Cd 441.6 Laser
F′ 480.0 Cd
F 486.1 H
Ar 514.5 Laser
e 546.1 Hg
d 587.6 He
He-Ne 632.8 Laser
C′ 643.9 Cd
C 656.3 H
Ecofriendly glass can display issues with inclusions and impurities. Lead and
arsenic are more effective than titanium and antimony for elimination of
impurities. Consequently, an ecofriendly glass might not tolerate UV or x-ray
exposure, while its lead-oxide predecessor tolerates exposure without issue.
Titanium oxide may crystallize in the form of small inclusions that leave
scratches during polish. Impurities may also create intrinsic fluorescence.
18.2 Crown
A krone, or crown (K), is basically soda lime glass:
where silica (SiO2) is derived from sand, sodium oxide (Na2O) is derived from
soda, and calcium oxide (CaO) is derived from lime. Soda lime glass might also
contain potassium oxide (K2O), which is derived from potash (K2CO3). The
silicate is a glass network former. Sodium oxide and calcium oxide are network
modifiers that lower the melting point and the viscosity, respectively. Diversity
in glass defeats crystallization and promotes homogeneity in the glass melt. Silica
is the base network of most glass.
A borosilicate krone (BK) is frequently described as
SiO2 B2 O3 M 2 O , (18.2)
where the alkali metal oxide (M2O) is a network modifier, such as sodium oxide
(Na2O) and potassium oxide (K2O). The addition of the alkali oxides lowers the
melting point and reduces the viscosity; these features promote ease of glass
183
184 Chapter 18
manufacture. The addition of borate (B2O3) fills voids and reduces the thermal
coefficient of expansion. Borate is a network modifier in smaller concentrations,
as shown in Table 18.1.
18.3 Flint
A flint (F) contains lead oxide (PbO) and alkaline oxide (M2O):
Flinti occurred naturally as flint stone from the south coast of Britain. Lead oxide
provides higher electron density than silica. Lead oxide also shifts UV resonance
toward the visible regime. A high lead content can make glass appear yellow.
Lead oxide is weakly reactive to the atmosphere. For improved chemical
stability, titanium oxide (TiO2) and zirconium oxide (ZrO2) may replace small
amounts of lead oxide at the cost of increased absorption in the blue. Figure 18.1
displays the Sellmeier index of a crown glass (K7) and flint (F2). The addition of
lead oxide shifts UV resonance toward the blue. The F2 glass displays a larger
partial dispersion ΔPgF than the K7. The shift of resonance toward the blue also
shortens the transmission spectrum (Fig. 18.2).
Lead oxide has several important features as a network modifier. The 90
electrons of lead oxide provide a higher electron density than the 30 electrons of
silica (SiO2). This increases the refractive index. The large mass of lead (82 u)
has a lower thermal velocity than the silica (14 u) within a glass melt.
Consequently, the lead oxide defeats crystallization through its low mobility. The
i
Flint is derived from splie, meaning split. Gemanic fli-, or spli-.
Composition and Spectra of Materials 185
Figure 18.1 Sellmeier spectra of K7 and F2. SCHOTT defines normal partial dispersion
by these two glass types. The addition of lead shifts the resonant peak toward the visible.
Figure 18.2 Transmission spectra of K7 and F2. The addition of lead shortens the
spectrum in the blue.
bond length of lead oxide at 4.0 Å is much longer than silica at 1.6 Å.
Consequently, its weaker bond promotes lower viscosity. To the benefit of the art
of glass blowing, lead oxide has two important effects: its high index creates
sparkle, and its high mass extends the working temperature.
Lead is the most common heavy metal in the earth’s crust. Three of four
heavy atoms spontaneously decay into a stable form of lead. Its high electron
density creates a bright reflection in a thin coating of paint. White lead (PbCO3)
is the basic pigment of lead paint, which is now strictly regulated and controlled
in numerous countries. As existing lead paint deteriorates, it settles in soil and
ground water. The same destination applies to the lead silicate in glass parts. Fine
particles of lead and other heavy metals must be properly disposed. A few early
symptoms of lead poisoning are diffuse muscle weakness, joint pain, nausea,
diarrhea, and constipation. The effects of lead on the central nervous system are
not, as yet, reversible.
186 Chapter 18
P2 O5 Al2 O3 MO ( F2 − O ) , (18.4)
Figure 18.3 Sellmeier spectra of K7 and N-FK5. the addition of fluorite shifts the resonant
peak from the visible regime.
Figure 18.4 Transmission spectra of K7 and N-FK5. The addition of fluorite lengthens the
spectrum in the blue.
The glass is frequently called lead borate. A special glass borate (B2O3) serves as
the base network in place of silica. The alumina is a network modifier for
chemical stability, while the lead silicate provides electron density. A short-flint
special (KzFS) is reactive with the atmosphere. A protective coating is required.
The lead borate of a short-flint special is reactive to the atmosphere. Storage in
dry nitrogen is recommended until a protective coating is applied. Significant
expertise is required for processing of a short-flint special glass. Ecofriendly
versions of short-flint special are based on niobium and silicate.
188 Chapter 18
Figure 18.5 Sellmeier spectra of F2 and KzFS1. Antimony in place of lead shifts the
resonant peak from the visible regime. A shortened lifetime flattens the refractive plot in
the blue.
Figure 18.6 Transmission spectra of F2 and KzFS1. Antimony in place of lead shortens
the spectrum in the blue.
Figure 18.7 Sellmeier spectra of F2 and KzFS1. Lead borate in place of lead silicate shifts
the resonant peak from the visible regime. A shortened lifetime flattens the refractive plot
in the blue.
Figure 18.8 Transmission spectra of F2 and KzFS1. Lead borate in place of lead silicate
shortens the spectrum weakly in the blue and strongly in the infrared.
The negative partial dispersion of a special short flint is essential for color
correction in the blue wavelength range. A shorter lifetime of resonance
decreases the partial dispersion. The relative partial dispersion is similar in
magnitude to the short flint KzFSH1, while the transmission in the blue is much
improved. A short-flint special provides a negative partial dispersion without a
deep reduction of spectrum length in the blue.
Table 18.2 Composition of niobium silicate glass S-NBH5 (Ohara MSDS 2009).
phosphate oxide P2O5. The zirconium oxide (ZrO2) is a network modifier that
shortens resonant lifetime of the niobium oxide. Zirconium has one less electron
than niobium. The addition of zirconium in place of niobium creates a holeii in
the valance band of the niobium-oxide network. A hole provides opportunity for
electron scatter and shorter lifetime of oscillation. The other metal oxides provide
diversity toward a lower melting point, lower viscosity, and less crystallization.
The antimony oxide removes iron.
The name of the Ohara glass S-NBH implies several features: S indicates an
environmentally safe glass; NB indicates the bulk composition as niobium; H
indicates a high index for this glass type.
A niobium-silicate short flint is very similar to a lead-borate short flint;
however, it is also different. The refractive index of S-NBH5 nearly equals that
of KzFSN5 in the visible regime, as shown in Fig. 18.9. The refractive indices at
the d lines are the same at 1.65412. The Abbe numbers are similar at 39.68 for
the S-NBH5 and 39.63 for the KzFSN5. The transmission of both materials is
nearly identical from 436 to 550 nm. This indicates a similar reduction in
resonant lifetime, which is essential for a short flint. However, there is significant
difference in the relative partial dispersion: ΔPgF equals –0.004 for S-NBH5, and
–0.007 for KzFSN5. The smaller ΔPgF of S-NBH5 also correlates with improved
spectrum length in Fig 18.10. S-NBH5 displays a longer spectrum with less
absorption in the blue.
In summary, the lead borate displays more relative partial dispersion, while
the niobium silicate is much more chemically stable. Environmental stability
ii
A hole is an empty electron state.
Composition and Spectra of Materials 191
Figure 18.9 Sellmeier spectra of KzFSN5 and S-NBH5. Niobium silicate in place of lead
borate replicates the spectrum in the visible regime.
normally requires some compromise in glass features. The holes responsible for
electron scatter also promote chemical reaction. Absorption and reaction are
intrinsic features of a short-spectrum flint with anomalous partial dispersion.
Figure 18.10 Transmission spectra of KzFSN5 and S-NBH5. Niobium silicate in place of
lead borate extends the spectrum from the visible regime. Less absorption indicates
longer lifetime and less negative relative partial dispersion.
192 Chapter 18
Figure 18.11 Sellmeier spectra of F2 and SF6. The addition of lead oxide in place of silica
greatly increases refractive index and dispersion.
Figure 18.12 Transmission spectra of F2 and SF6. The addition of lead oxide in place of
silica reduces transmission the blue.
Composition and Spectra of Materials 193
Figure 18.13 Sellmeier spectra of SF6 and N-SF6. Titanium oxide in place of lead oxide
replicates the refractive index in the visible.
Figure 18.14 Transmission spectra of SF6 and N-SF6. Titanium oxide in place of lead
oxide reduces transmission in the blue and green.
194 Chapter 18
∇ 2 E = μ ( ε0 E
+ J ) , (19.1)
∂ ∂ ∂
∇= i + j+ k , (19.2)
∂x ∂y ∂z
where i, j, and k are unit vectors. The ∇2 operator defines the Laplacian as
∂2 ∂2 ∂2
∇2 = i + j + k. (19.3)
∂x 2 ∂y 2 ∂z 2
= ∂A
A (19.4)
∂t
and
2
= ∂ A .
A (19.5)
∂t 2
ω2
k x2 + k y2 + k z2 = N 2 , (19.6)
c2
where kx, ky, and kz are the spatial frequencies along orthogonal axes, N is the
complex refractive index, ω is the temporal frequency, and c is the speed of light.
Each k2 term represents a spatial curvature of the wave along an axis. The ω2
term represents the temporal curvature of the wave.
Examination of Eq. (19.6) reveals an important concept: the sum of the
spatial curvatures is proportional to the temporal curvature. The scale of spatial-
to-temporal curvature is dependent on the refractive index. Thus, the spatial
curvature is dependent upon the electric current.
Figure 19.1 Exponential decay by free-electron current. The solid line is the external
electric field; the dashed line is the internal electric field. The electric field of the free-
electron current completely cancels the external electric field within a spatial wavelength.
Advanced Concepts 197
Figure 19.2 Shortened wavelength by bound-electron current. The solid line is the
external electric field; the dashed line is the internal electric field. The electric field of the
bound-electron current partially cancels the external electric field. The partial cancellation
creates a shorter internal wavelength.
The complex refractive indices of free and bound carriers are well
documented.5 The refractive index of free carriers is expressed as a Drude
model:5
ω2
N F2 = 1 + 2 PF = εR , (19.7)
−ω − iω / τ F
where ωPF is the plasma frequency of free carriers, τF is the lifetime of a free
carrier, and εR is the dielectric constant. The plasma frequency of free carriers
may be expressed as
ρF q 2
ω2PF = , (19.8)
m ε0
where ρF is the concentration of free carriers, q is the charge of the carrier, and m
is the mass of the carrier.
The corresponding refractive index of bound carriers is expressed as a
Lorentz oscillator:5
ω2PB
N B2 = 1 + 2 2 , (19.9)
−ω − iω / τ B + ωRB
198 Chapter 19
where ωPD is the plasma frequency of the bound carriers, ωRB is the resonant
frequency of the bound state, and τB is the lifetime of the bound state. The plasma
frequency of bound carriers may be expressed as
ρB q 2
ω2PB = , (19.10)
m ε0
ω2 1
N B2 = 1 + 2 PB 2 = ε R ; ω >> . (19.11)
ωB − ω τF
19.4 Emission
A dipole moment p defines spatial distribution of charge as
p = ρ r ∂V , (19.13)
where ρ is the charge density, r is the spatial position, and ∂V is the differential
volume. The electric potential of the dipole is
1 p ⋅ rˆ
Φ= 2 , (19.14)
4πε 0 r
where r̂ is a unit vector. As the distance r grows, the electric field of a radiating
dipole becomes
1 ( rˆ ⋅ p
⋅ rˆ )
E= 2 exp ( ik r ) , (19.15)
4πε 0 c r
where p is the temporal curvature of the dipole moment. Exercise of the cross
products reveals
p sin θ
E = 2 exp ( ik r ) , (19.16)
4πε 0 c r
p
2
sin 2 θ
ID = 2 . (19.17)
32 π2 ε 0 c 3 r
19.5 Coherence
The axial version of the space-angle product is1
Δz Δk z = 8 . (19.18)
4 2
Δz Δλ = λP , (19.19)
π
200 Chapter 19
where Δλ is the wavelength range and λP is the peak wavelength. The coherence
length is
4 λ P
2
sC = . (19.20)
π Δλ
λP
ΛC ≈ cyc . (19.21)
Δλ
2
λ λ λ
Λ C ≈ P P = P . (19.22)
Δλ n n Δλ
Γ ( r1 , t1 , r2 , t2 , ) = A ( r2 , t2 ) A*( r2 , t2 ) , (19.23)
where A is the amplitude of the electric field and A* is the complex conjugate of
A. If the correlation has a magnitude of unity, then the system is coherent. If the
correlation is null, then the system is incoherent. Figure 19.3 displays the axial
coherence of a 50-nm spectral filter.
Coherence determines the structure of interference patterns. Partial
reflections of an electric-field pattern can rejoin the transmitted electric field. The
contrast of the interference pattern is determined by the correlation of the two
waves after separation in both space and time. Coherence length becomes more
important as dimensions approach the coherence length.
The correlation of a single dipole field is completely coherent, while the
correlation between two dipole fields may be either coherent or incoherent. If
two dipoles radiate in constant phase, such as during stimulated emission, then
the correlation between dipole fields is coherent. However, if two dipoles radiate
in random phase, such as during multiple fluorescent events, then the correlation
between the dipole fields is incoherent.
Van Cittert and Zernike developed expressions for the partial coherence of an
incoherent source as the Fourier transform of the angular extent of the source.5 In
Eq. (10.2) the partial coherence of a circular incoherent source is stated as
2 J1 ( ρ k NA S )
Γ (ρ) = ,
ρ k NA S
Advanced Concepts 201
Figure 19.3 Axial coherence of a Gaussian 250-nm bandpass filter. Peak wavelength of
transmission is 500 nm. Bandwidth is 250 nm. Axial coherence is 1 μm according to Eq.
(19.22), or 1.27 according to Eq. (19.20).
where ρ is the distance between two points of the illumination field and NAs is
the numerical aperture of the source as defined below:
NA S = sin βS , (19.24)
where βs is the full angle of the source with respect to the illumination field.
r2
I = I 0 exp −2 2 . (19.25)
rG
−π ΝAG2 2
I = I 0 exp 2
r . (19.27)
λ
The peak irradiance of a Gaussian beam (power per area) is related to the total
power P0 (quanta per time) by
202 Chapter 19
π ΝA G2 2
I0 = 2 2
P0 = P0 , (19.28)
λ AG
where P0 is the power of the beam and AG is the area of the beam. The power
enclosed by a radius is
r 2
P ( r ) = P0 1 − exp −2 2 . (19.29)
rG
1 k ≤ kM
ATF ( k ) = , (19.30)
0 kM ≤ k
where kM is the spatial frequency of the margin in cycles per distance and the
ATF cutoff frequency is the spatial frequency of the aperture:
ΝA M 1.22
kM = = . (19.31)
λ φ Airy
The ATF describes a coherent system where the temporal coherence between
points is stationary.
The OTF is the autocorrelation of the ATF. The OTF of a lens with a circular
aperture is
Advanced Concepts 203
2
2 arccos k − k 1 − k k ≤ ( 2k M )
OTF ( k ) = π 2k M 2k M 2k M ,
0
( 2kM ) ≤ k
(19.32)
2ΝA M 2.44
( 2 kM ) = = . (19.33)
λ φ Airy
As displayed in Fig. 19.4, the OTF closely resembles a cone with a height of
unity. This cone can be correlated to the Airy transform as follows:
k
OTF ( k ) ≅ tri . (19.34)
1.6 kM
Figure 19.4 MTFs of an Airy pattern and a conical estimate. The solid line is the Airy
pattern. The dashed line is the conical estimate. Standard deviation of MTFs is < 0.01.
Standard deviation of the corresponding point spread is < 0.03.
204 Chapter 19
1 − x ( 0 ≤ x ≤ 1)
tri ( x ) = . (19.35)
0 (1 < x )
The marginal frequency is derived from the conical frequency as
kC
kM = . (19.36)
1.6
The standard deviation conical estimate from the Airy MTF is < 1% of the
expected value up to the marginal frequency. The marginal NA is derived from
the conical frequency as
kC λ
ΝA M = . (19.37)
1.6
19.8 Scatter
Surface texture may create a random phase delay during reflection or
transmission. Consequently, the exiting electric field EE relates to the incident
electric field EI as
where φ0 is the magnitude of the phase delay and k0 is the spatial frequency of the
phase delay. At a small phase delay, this becomes
EE
s = 1− = − iφ0 cos ( k0 x ) . (19.40)
EI
2
S= s =φ 2 , (19.41)
where φ is the rms of the phase delay. The scatterance is frequently called the
total integrated scatter (TIS).
There a three specific formats of the rms phase delay. The rms phase delay
for transmission is
2πσ
φ T = Δn , (19.42)
λ
where σ is the rms surface texture. The rms phase delay for an external reflection
is
2πσ
φ ER = 2 . (19.43)
λ
2πσ
φ IR = 2n . (19.44)
λ
k R = k In + k F . (19.45)
2k R ⋅ k F = 2k R k F cos θ = k F2 . (19.46)
1
k R cos θ = k F . (19.47)
2
At normal incidence, the spatial frequency of reflection is half that of the filter
lattice.
206 Chapter 19
Figure 19.5 Wave vectors of the interference filter. A reflected vector is the sum of the
incident vector and the filter vector. Blue shift is indicated by longer wave vectors at a
larger angle with the filter vector.
−t
QOSL ∝ 1 − exp ( t ≈ τF ) , (19.48)
τF
where t is the integration time and τF is the lifetime of the fluorophore. The
quantum of the dark current is linearly dependent on the integration time:
Q DC ∝ t . (19.49)
Q RN ∝ 1 . (19.50)
The quantum of the background shot noise is dependent on the square root of
integration time:
Q BSN ∝ t1 2 . (19.51)
The shot noise of the background may easily become larger than the read noise or
the object quantum.
The contrast of a fluorophore with a long lifetime is frequently limited by the
shot noise of the quanta. The quantum of a fluorophore with a long lifetime is
linearly dependent on the integration time:
The contrast with dark current is stationary in time, the contrast with read noise
grows linearly with time, and the contrast with shot noise grows with the square
root of time.
Beyond increasing the integration time, the effects of background and noise
may be reduced by optical design. These expressions for contrast provide a
foundation for maximization of contrast through selection of NA and
magnification.
Appendix: Prescriptions
The prescriptions used in this book are summarized below.
The magnification M has several formats: spatial enlargement (10X), spatial
enlargement with infinity correction (10XI), spatial reduction (10XR), or angular
enlargement (10XA) .
The focal lengths are important to macro- and microlens formats. A
microscope objective is normally defined by magnification, numerical aperture,
and tube length. The tube length (TL) may specify the focal length of the tube
lens for enlargement with infinity correction.
The field of view (FOV) can be spatial (25 mm) or angular (15 deg). An
attempt is made to make the field of view equivalent the 12-mm diameter of a
typical CCD sensor.
The image convergence is specified by paraxial numerical aperture (NA),
image-space numerical aperture (ISNA), object-space numerical aperture
(OSNA), f-number (f/#), or image-space f/#, which indicates the f/# inflation.
Aspheric parameters indicate the following: conic indicates a conic constant;
A4 indicates the scale of radius to 4th power; A6 indicates the scale of radius to
6th power.
209
210 Appendix
12
Prescription 9.1 10XR double gauss.
(M = 10XR, f/# = 1.4, Image-space f/# = 1.5, f = 52 mm, FOV = 12 mm)
13
Prescription 9.2 10XR microlens, from Matsui.
(M = 10XR, f/# = 2.9, Image-space f/# = 3.2, f = 105 mm, FOV = 12 mm)
13
Prescription 9.3 2XR microlens, from Matsui (1998).
(M = 2XR, f/# = 2.9, Image-space f/# = 4.3, f = 105 mm, FOV = 12 mm)
13
Prescription 9.4 1X microlens, from Matsui (1998).
(M = 1X, f/# = 2.9, Image-space f/# = 5.5, f = 105 mm, FOV = 12 mm)
14
Prescription 9.5 2XR TSL, prescription patent pending by Seward (2008).
(M = 2XR, f/# = 3.5, Image-space f/# = 3.9, f = 193 mm, FOV = 12 mm)
(Glass types by Ohara Inc: lanthanum with low-index LAL, titanium with medium-index
TIM, lanthanum with medium-index LAM.)
Prescription 10.7 Aspheric plus doublet. Custom doublet, production aspheric from
OptoSigma. (M = 4XR, ISNA = 0.25, f = 19 mm, FOV = 1.2 mm)
Prescription 10.9 Aspheric Abbe. Two custom aspheric elements of B270. Conic
constant is the only aspheric parameter.
(M = 4XR, ISNA = 0.25, f = 18 mm, FOV = 1.2 mm)
Prescription 10.10 TIRF illumination, derived from U.S. Patent No. 6,519,092 by
Yamaguchi.23 (M = 60XI, TL = 200 mm, ISNA = 1.0, f = 3.3 mm, FOV = 60 deg)
Prescription 11.6 60X objective with silica cover in place of glass. Oil must vary in
thickness for compensation of silica in place of glass.
(M = 60XI, TL = 200 mm, ISNA = 1.4, f = 3.3 mm, FOV = 0.2 mm)
Prescription 12.3 10X plan achromat. Derived from Fukatake,21 U.S. Patent No.
6,128,139. (M = 10XI, TL = 200 mm, NA = 0.25, f = 20 mm, FOV = 1.2 mm)
Prescription 12.4 40X fluor, derived from Misawa,22 U.S. Patent No. 5,699,196.
(M = 40XI, TL = 200 mm, NA = 0.75, f = 5 mm, FOV 0.3 mm)
Prescriptions 12.5–12.7 60X TIRF, derived from Yamaguchi,23 U.S. Patent No.
6,519,092. (M = 60XI, TL = 200 mm, ISNA = 1.4, f = 3.3 mm, FOV = 0.2 mm)
Prescription 12.12 Internal parabola, after Larson et al.26 and Krogmeier et al.27
(M = 20X, TL = 200 mm, ISNA = 1.0, f = 10, FOV = 0.6 mm)
Prescription 13.1 Production doublet as a tube lens, from Linos Photonics No. 322271.
(M = 1X, TL = 200 mm, f = 200 mm, ISNA = 0.025, FOV = 12 mm)
Prescriptions 13.3–13.4 Doublet-pair tube lens, from Misawa,22 U.S. Patent No.
5,699,196. (M = 1X, TL = 200 mm, ISNA = 0.025, f = 200 mm, FOV = 12 mm)
Required 5X scale of Table 2.
Prescription 13.6 Doublet-pair tube lens with real glass, from Misawa,22 U.S. Patent No.
5,699,196. Real glass types of the 1990s are not available in 2009.
(M = 1X, TL = 200 mm, ISNA = 0.025, f = 200 mm, FOV = 12 mm)
Prescription 13.9 Cube within a finite conjugate. (Strehl ratio at the d line is 0.9.)
(M = 1X, TL = 200 mm, ISNA = 0.025, FOV = 12 mm)
Prescription 13.10 Tilted plate within a finite conjugate. (Strehl ratio at the d line is 0.9.)
(M = 1X, TL = 200 mm, ISNA = 0.025, FOV = 12 mm)
Prescription 13.11 Thick plate warped within ∞ correction. (Strehl ratio at the d line is 0.9.)
(M = 1X, TL = 200 mm, ISNA = 0.00, FOV = 0 deg)
Prescription 13.12 Thin plate warped within ∞ correction. (Strehl ratio at the d line is 0.9.)
(M = 1X, TL = 200 mm, ISNA = 0.00, FOV = 0 deg)
Prescription 14.2 Kellner eyepiece, comprising production parts from Linos Photonics
No. 312315 plano-convex 50 × 22.4 and 322285 doublet 30 × 12.5.
(M = 10XA, TL = 160 mm, OSNA = 0.025, f = 25 mm, FOV = 15 mm)
Prescription 14.3 Plössl eyepiece 10X telecentric, comprising production parts from
OptoSigma 026-1140 doublets 50 × 30.
(M = 9.4XA, TL = 1000 mm, OSNA = 0.025, f = 25 mm, FOV = 26.6 mm)
Prescription 14.5 Erfle eyepiece 1997. Glass from prior art in U.S. Patent No. 5,691,850
by Arisaka55 and optimization by Seward.
(M = 10XA, TL = 1000 mm, OSNA = 0.025, f = 25 mm, FOV = 25.0 mm)
229
Recommended Reading
W. J. Smith, Modern Optical Engineering, 4th Ed., McGraw-Hill, New York
(2007).
Introduction to lens design. Paraxial methods. Geometric aberrations.
Practical design considerations. Math: algebra, trigonometry.
A. Beiser, Concepts of Modern Physics, McGraw-Hill, New York (2002).
Wave propagation. Diffraction. Electron states. Molecular structure.
Absorption and emission. Wave-particle duality. Math: algebra, calculus,
statistics.
E. Hecht, Optics 4th Ed., Addison-Wesley, Reading, Massachusetts (2001).
Excellent reference for the field of optics. Maxwell’s equations in both point
and integral format. Refractive index. Wave propagation. Geometric optics.
Polarization. Reflection coefficients. Fourier optics. Quantum nature of light.
Math: algebra, vectors, calculus.
J. W. Goodman, Introduction to Fourier Optics 3rd Ed., McGraw-Hill, New York
(2004).
A classic text book on summation of electromagnetic waveforms. Essential
knowledge for an optical engineer. Math: calculus, Fourier methods.
231
References
1. G. H. Seward, “Two-dimensional space-angle product of a Gaussian beam,”
Opt. Eng. 40(2), pp. 1959–1962 (2001).
2. B. H. Walker, Optical Engineering Fundamentals, 2nd Ed., SPIE Press,
Bellingham, WA (2008).
3. W. J. Smith, Modern Optical Engineering, 2nd Ed., McGraw-Hill, New York
(1990).
4. H. R. Phillipp, “Silicon dioxide glass,” Fig. 2.4 in F.-T. Lentes, “Refractive
index and dispersion,” in The Optical Properties of Glass, H. Bach and N.
Neuroth, Eds., 2nd corrected printing, Springer, New York (1998).
5. E. Hecht, Optics, Addison-Wesley, Reading, MA (1987).
6. F. B. Hildebrand, Advanced Calculus for Applications, Prentice-Hall,
Englewood Cliffs, New Jersey (1976).
7. A. Beiser, Concepts of Modern Physics, McGraw-Hill, New York (2003).
8. H. Du, R. A. Fuh, J. Li, A. Corkan, and J. S. Lindsey, “PhotochemCAD: a
computer-aided design and research tool in photochemistry,” Photochem.
Photobiol. 68, pp. 141–142, (1998).
9. R. Y. Tsien, “The green fluorescent protein,” Annu. Rev. Biochem. 67, pp.
509–544 (1998).
10. G. H. Seward, “Image contrast of subpixel objects,” Opt. Eng. 37(2), 710–
716 (1998).
11. E. F. Schubert, Light-Emitting Diodes, Cambridge Univ. Press, Cambridge
(2006).
12. G. H. Smith, Camera Lenses, SPIE Press, Bellingham, Washington (2009).
13. S. Matsui, “Long focal length microlens system,” U.S. Patent No. 5,831,775
(1998).
14. G. H. Seward, “Spectroscopy lens for telecentric sensor,” U.S. Patent
Application 12,333,488 (2008).
15. E. M. Nelson, “Critical microscopy,” J. R. Microscop. Soc., pp. 282–289
(1910).
16. C. Zeiss, “Description of Professor Abbe’s Apertometer,” Proc. Royal
Microsc. Soc. 28(4), pp. 19–22 (1877).
17. A. Kohler, “Zeitschrift fur wissenschaftl,” Mikroskopie, 10, pp. 433–440
(1893),
233
234 References