Dharmasastha Technical Seminar
Dharmasastha Technical Seminar
Dharmasastha Technical Seminar
Submitted by
DHARMASASTHA V
(113020203001)
BACHELOR OF TECHNOLOGY
in
CHEMICAL ENGINEERING
An Autonomous Institution
NOVEMBER- 2023
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VEL TECH HIGH TECH
Dr. RANGARAJAN Dr. SAKUNTHALA ENGINEERING COLLEGE
(An Autonomous Institution)
BONAFIDE CERTIFICATE
Certified that this is the bonafide report of Technical seminar (CH8812) done by
DHARMASASTHA V (113020203001) in “UTILIZING PLANTS FOR
PHARMACEUTICAL PRODUCTION” during the academic year of 2023 –
2024.
SIGNATURE SIGNATURE
STAFF INCHARGE HEAD OF THE DEPARTMENT
I wish to express my sincere thanks to the people who extended their help and
support during my Technical seminar work.
First of all I would like to express my deep gratitude to our beloved and respected
Founder President and Chairman Col. Prof. Dr. Vel. Shri. R. Rangarajan,
B.E(EEE), B.E(Mech), MS(Auto)., Vice Chairman Dr. Sakunthala Rangarajan,
M.B.B.S., Chief Managing Trustee Mrs. R. Mahalakshmi Kishore Kumar, B.E.,
MBA(UK), Ph.D., and our dynamic director Mr. K. V. D. Kishore Kumar,
B.E.,MBA (US).for their kind encouragement and blessings.
I take this opportunity to thank our Dean, SoBCE Dr. B. Bharathiraja, M. Tech.,
Ph.D., for always encouraging and helping me by giving necessary inputs whenever
needed.
I would like to express special thanks to our Deputy Dean of PPP Dr. A.
Saravanaraj, M.Tech., Ph.D., for his useful advice and suggestions for my
Technical seminar completion.
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ABSTRACT
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LIST OF CONTENTS
1 INTRODUCTION 1
2 LITERATURE SURVEY 5
5 NUCLEAR TRANSFORMATION 13
6 HOST PLANT FOR PMP EXPRESSION 16
7 FUTURE PERSPECTIVES 20
8 CONCLUSION 21
9 REFERENCES 23
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CHAPTER 1
INTRODUCTION
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biopharmaceuticals in plants—dubbed "molecular farming," a phrase coined by
Fischer et al.—offers advantages such scalability, rapidity, and enhanced safety.
These characteristics could be useful for the quick manufacture of vaccinations
against pandemic disease outbreaks or biological terrorism, and they are desirable
when resources are few. The US Food and Drug Administration approved the first
vaccine produced in Nicotiana tabacum cell suspension culture expression system
in 2006; this vaccine protects Newcastle disease virus in poultry. In 2012, the first
plant-made pharmaceutical (PMP) for humans was approved: a recombinant
human glucocerebrosidase produced in a carrot (Daucus carota) cell suspension
culture system. This enzyme is used to treat Gaucher’s disease, a hereditary
lysosomal storage disorder caused by a mutation of the β-glucocerebrosidase gene.
The disease is characterized by enlargement of the liver and spleen, fatigue, and
anaemia. Since then, a variety of technologies have been used to produce PMPs,
and demand for these goods is rising. Plant-derived vaccine production technology
has attracted the interest of the US Defence Advanced Research Projects Agency
(DARPA), which has invested in both proof-of-concept operations and the
construction of commercial-scale facilities for the manufacturing of plant-derived
vaccines. Specifically, DARPA disclosed the planning and execution of a plant-
derived vaccine production facility capable of producing tens of millions of doses
using transient expression in Nicotiana Benthamian. After the plants are treated
with the proper vector, these vaccines can be used within a month, demonstrating
how quickly transient expression can be used to initiate the production of "green
vaccines.". By emphasizing how easily the upstream process could be expanded,
the authors demonstrated the suitability of plant-derived vaccine production as a
means to rapidly protect the population against new infectious diseases.
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We review plant-produced therapeutic proteins in this review. We start by
examining the several kinds of recombinant pharmaceutical proteins that have been
created thus far, such as therapeutic proteins, antibodies, and vaccines. Next, we go
into the technologies and instruments used to produce these proteins in plants, as
well as the different plant systems that can be used for production. In conclusion,
we go over the drawbacks of utilising plant systems for recombinant protein
production in contrast to mammalian, insect, yeast, and E. coli systems, as well as
the present status of research and development targeted at resolving these issues.
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CHAPTER 2
REFERENCE
1.Title: " Particle bombardment and the genetic enhancement of crops: myths and
realities." Altpeter F, Baisakh N, Beachy R, Bock R, Capell T, Christou P, Daniell H,
Datta K, Datta S, Dix PJ, Fauquet C , 2005
Summary: DNA transfer by particle bombardment makes use of physical processes to
achieve the transformation of crop plants. There is no dependence on bacteria, so the
limitations inherent in organisms such as Agrobacterium tumefaciens do not apply.
The absence of biological constraints, at least until DNA has entered the plant cell,
means that particle bombardment is a versatile and effective transformation method,
not limited by cell type, species or genotype.
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3.Title: ‘’coordinators of immune and inflammatory responses " Arai K-i, Lee F,
Miyajima A, Miyatake S, Arai N, Yokota T 1990
Summary: Proliferation and differentiation of mammalian cells are generally
controlled by extracellular signals. Among these signals are a group of polypeptide
growth factors and differentiation factors such as EGF, NGF, PDGF, and FGF. More
recently, a battery of lymphokines and monokines produced by activated T cells or
macrophages have been added to this catalogue.
4.Title: " Use of plant viruses and virus-like particles for the creation of novel
vaccines."
Balke I, Zeltins A ,2019
Summary: In recent decades, the development of plant virology and genetic
engineering techniques has resulted in the construction of plant virus-based vaccines
for protection against different infectious agents, cancers and autoimmune diseases in
both humans and animals. Interaction studies between plant viruses and mammalian
organisms have suggested that plant viruses and virus-like particles (VLPs) are safe
and noninfectious to humans and animals.
5.Title: " Plant tramsformation: problems and strategies for practical application."
Birch RG (1997)
Summary: Plant transformation is now a core research tool in plant biology and a
practical tool for cultivar improvement. There are verified methods for stable
introduction of novel genes into the nuclear genomes of over 120 diverse plant
species. This review examines the criteria to verify plant transformation; the
biological and practical requirements for transformation systems.
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6.Title: " N-glycosylation of plant-produced recombinant proteins. "
Bosch D, Castilho A, Loos A, Schots A, Steinkellner H (2013)
Summary: Plants are gaining increasingly acceptance as a production platform for
recombinant proteins. One reason for this is their ability to carry out posttranslational
protein modifications in a similar if not identical way as mammalian cells. The
capability of plants to carry out human-like complex glycosylation is well known.
Moreover, the targeted manipulation of the plant N-glycosylation pathway allows the
production of proteins carrying largely homogeneous, human-type oligosaccharides.
7.Title: " Novel surface display system for proteins on non-genetically modified
gram-positive bacteria. Appl Environ Microbiol "
Bosma T, Kanninga R, Neef J, Audouy SA, van Roosmalen ML, Steen A, Buist G,
Kok J, Kuipers OP, Robillard G ,2006
Summary: A novel display system is described that allows highly efficient
immobilization of heterologous proteins on bacterial surfaces in applications for
which the use of genetically modified bacteria is less desirable.
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9.Title: " Production of recombinant proteins by yeast cells. Biotechnol Adv" Çelik
E, Çalık P ,2012 .
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CHAPTER 3
TYPES OF PMPs
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sequence of the virus is obtained, a vaccine can be successfully produced within
8 weeks. This process is four- to eightfold faster than the currently used egg .
Antibodies:
Therapeutic proteins:
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CHAPTER 4
Two major methods are used to produce recombinant proteins in plant systems
stable genetic transformation and transient gene expression. The method chosen
depends on the plant species, target genome (nuclear or plastid), and gene
characteristics. Stable genetic transformation involves the stable production of
proteins via the insertion of recombinant genes into the plant cell genomes .This
method has several advantages. In particular, it enables the stable, large-scale
production of recombinant proteins, and allows for the production of multiple
recombinant proteins. However, this method also has disadvantages: it is time-
consuming and must be modified to ensure mass expression. Moreover, in nuclear
transformation, since genes are randomly inserted into the nucleus, unstable
expression or silencing of genes could occur due to positional effects.
Transient gene expression can be used to produce a target protein more rapidly than
stable genetic transformation. There are two major methods for transient gene
expression: Agrobacterium-mediated infiltration and viral vector-based transient
expression. In both cases, stable integration of the transgenic is not required.
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CHAPTER 5
Nuclear transformation
Among several methods for nuclear transformation, the most widely used nuclear
transformation method is Agrobacterium-mediated plant transformation. In the case
of plants which cannot be transformed with Agrobacterium, polyethylene glycol-
mediated protoplast transformation method or biolistic transformation method can
be used Most recombinant proteins in plants generated to date have been produced
through nuclear transformation, in which a gene of interest (GOI) is stably
integrated into a chromosome in the nucleus of a plant cell. The natural plant
pathogens Agrobacterium tumefaciens and Agrobacterium rhizogenic, which
produce crown gall disease and hairy root disease, respectively, mediate indirect
gene transfer during nuclear transformation. Agrobacterium tumefaciens carries a
tumor-inducing (Ti) plasmid comprising a transfer DNA (T-DNA) region, a
virulence (vir) gene, and an origin of replication..
The T-DNA region contains auxin, cytokinin, and opine biosynthesis genes between
the left border (LB) and right border (RB). Auxin and cytokinin are phytohormones
that increase the size of plant cells and promote division. Opines, such as octopine
and nopaline, are derivatives of various amino acids or sugar phosphates produced
in host plants that serve as nutrients for Agrobacterium after infection. When an
infection begins, the T-DNA region of the Ti-plasmid is transferred to the nucleus of
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the plant cell and then fuses with the plant genome. At this time, the vir genes are
expressed to facilitate the transfer and integration of the T-DNA. Based on these
mechanisms by which Agrobacterium tumefaciens mediates plant transformation, a
T-DNA binary vector system was developed consisting of two autonomous-
replicating disarmed Ti-plasmids working as helpers for T-DNA processing and
transfer and a T-region-containing binary vector for cloning . The binary vector also
contains multiple cloning sites, origins of replication that operate in both E.
coli and Agrobacterium, and antibiotic selection markers that function in plants
and E. coli. The helper plasmid contains vir genes that promote gene transfer and
integration into plant cells. After Agrobacterium infection of plants, callus
formation occurs, callus differentiation is induced, and shoots and roots are
generated. The resulting transgenic plant thus becomes a host for recombinant
protein production. In many cases, the GOI is expressed under the control of a
constitutive strong promoter such as the cauliflower mosaic virus. In some cases, the
GOI is expressed under the control of a seed-specific promoter, and the target
protein accumulates in mature seeds. The advantage of this feature is that it is
possible to obtain transgenic plants immediately by planting seeds that stably
express the target gene. The protein of interest could also be targeted to subcellular
organelles such as plastids, the endoplasmic reticulum, or the vacuole. There are
also various choices for post-translational modifications, as the proteins are retained
in the endoplasmic reticulum or secreted into the apoplast.
Chloroplast transformation:
In addition to inserting a GOI into the nucleus, the GOI can also be introduced into
chloroplast chromosomes to express the recombinant protein in leaf tissue. The
chloroplast is a membrane-bound organelle whose genetic characteristics closely
resemble those of prokaryotes since chloroplasts are thought to have originated from
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cyanobacteria. Each mature leaf cell contains up to 100 chloroplasts, and each
chloroplast contains ~ 100 copies of chloroplast genomic DNA. Thus, it provides a
high gene copy number and leads to result in high expression of recombinant protein
from integrated GOI in the chloroplast genome. Chloroplast transformation is
achieved by bombarding the leaf with gold particles coated with plastid DNA
fragments containing the GOI and allowing the DNA to be integrated into the plastid
genome via homologous recombination .Homologous recombination allows the GOI
to be inserted into a specific position in the chloroplast genome, and no post-
transcriptional gene silencing has been observed .In addition to bombardment,
polyethylene glycol can be used to insert a GOI into the chloroplast genome. This
simple, efficient method allows the simultaneous transformation of many samples,
and the plant tissue shows a high survival rate, but the success rate is low compared
to other methods. Although transgenes are expressed at high levels in the chloroplast,
a chloroplast-specific promoter is often used for optimization. For example,
the psbA promoter exhibits higher translational activity than other promoters. Codon
optimization of the target gene is also performed using the sequence of psbA to
increase the translation rate .However, plastids do not provide post-translational
modification pathways such as glycosylation, making them unsuitable for the
production
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CHAPTER 6
Arabidopsis is an excellent model for plant science research due to its short
generation time, high-density growth, and easy transformation.
However, Arabidopsis is not suitable for protein production due to its low biomass.
Higher biomass and protein content of plants is advantageous for recombinant
protein production since the relatively lower content of growth inhibitory factors
and secondary metabolites. Representative plants include tobacco, cereals, legumes,
fruits, and vegetables.
Nicotiana spp:
N. benthamiana and N. tabacum have many desirable characteristics for
the production of recombinant proteins, such as a fast growth rate, high biomass,
and easy acceptance of foreign genes. Thus, the levels of recombinant proteins
produced in tobacco are higher than in other crops. For example, the expression
level of green fluorescent protein in transformed tobacco exceeded 50% of total
soluble proteins when a viral vector was used. Also, because tobacco is not a food or
feed crop, it is free from food- or feed-related contamination problems. Of course,
many tobacco varieties contain high levels of toxic alkaloids, but low-alkaloid
varieties exist that are used to produce pharmaceutical proteins. When
52 Nicotiana varieties were evaluated, N. tabacum cv. I 64 showed the highest
protein concentration, large amount of biomass, and small amount of alkaloids.
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Cereals:
Unlike leaf crops, protein expression in seeds has the advantage that it
can be stored for a long time even at room temperature because proteins are stably
accumulated. In addition, since cereal seeds contain almost no phenolic compounds,
the efficiency of downstream processes such as refining and analysis is high. These
properties allow cereals containing therapeutics or vaccines to be administered
orally with minimal processing. However, it is difficult to develop a suitable
recombinant protein production system in the seeds of cereal plants because it is
time-consuming to obtain seeds.
Legumes:
Legumes such as alfalfa and soybeans have an advantage for protein
production because their ability to fix atmospheric nitrogen lowers the need for
chemical fertilizer. Many studies have been conducted to produce recombinant
proteins in alfalfa because it has a large dry biomass yield per area and can be
harvested up to nine times per year. For example, lactoferrin has been produced in
alfalfa In addition, soybean has a high protein content in seeds (> 40%) as compared
to other crops, which is beneficial for recombinant protein production In addition,
soybeans have an excellent ability to stably store protein. For example, the
recombinant protein remained stable in soybean seeds at room temperature even
after 7 years. However, since soybean seeds contain large amounts of oil, the
efficiency of downstream processes such as refining and analysis is not high.
Duckweed:
Duckweed is a perennial monocotyledonous plant belonging to the
Lemnaceae that lives on the water surface in rice fields or ponds. A small oval
winter bud from the mother plant sinks into the water in the autumn, stays dormant
in the water in the winter, and rises to the water surface in the spring of the
following year to undergo asexual reproduction. Duckweed grows rapidly and can
double in one day, and its culture and propagation are simple. In addition, up to 45%
of the plant body is made up of protein, and it is relatively resistant to
contamination. Duckweed has several advantages as a PMP platform: First, scale-up
is easy due to the low cost of culture medium for duckweed. Second, since it does
not produce pollen, duckweed is safe from concerns about gene transfer into the
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ecosystem. Finally, duckweed is edible.
Moss:
Physcomitrium patens (spreading earth moss) can grow rapidly in an
inorganic medium without phytohormones or vitamins. Genetic studies have
revealed that most mosses exist as haploids during the growing season, pointing to
their ease of transformation P. patens shows high stability as a protein production
platform because it undergoes a complex post-translational modification process
during protein expression. This can be an advantage to produce exogenous
recombinant proteins because it allows stable protein production.
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CHAPTER 7
FUTURE PERSPECTIVES
Plant expression systems for recombinant protein production have several specific
advantages. However, their application in recombinant protein production must
overcome major barriers such as a lack of regulatory approval. PMPs are currently
used primarily for diagnostic purposes and as veterinary medicines. Although it is
difficult to obtain approval for PMP as a human medical protein, it will be necessary
to secure a basis for approval to produce recombinant human medical protein in the
future. These systems also have some disadvantages, such as plant-specific
glycosylation patterns differing from those in animal cells, low yields for
recombinant protein production, and complex transgenic plant management
practices, but solutions to these problems are possible with the development of new
technologies.
Protein glycosylation is an essential post-translational modification that occurs in all
eukaryotes. The early steps of this process are well conserved in plants, animals, and
yeast, but late N-glycan maturation in the Golgi apparatus varies considerably.
Therefore, it will be important to control the glycosylation of target proteins in
plants. Indeed, Protalix BioTherapeutics increased the therapeutic efficacy of
ELELYSO™ by adding mannose to N-glycan. A recent study demonstrated a
technique for removing xylose and fucose from N-glycan in plant. In the future, we
expect that this technology will be further developed to freely control whether N-
glycan residues are attached to target proteins in plants.
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CHAPTER 8
Conclusion
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CHAPTER 9
REFERENCE
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9. Ma, Julian K-C.; Drake, Pascal M. W.; Christou, Paul (2003). "Genetic
modification: The production of recombinant pharmaceutical proteins in
plants". Nature Reviews Genetics. 4 (10): 794–
805. doi:10.1038/nrg1177. PMID 14526375. S2CID 14762423.
10. "ProdiGene Launches First Large Scale-Up Manufacturing of Recombinant
Protein From Plant System" (Press release). ProdiGene. February 13, 2002.
Retrieved March 8, 2013.
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