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EKG Guide

The document describes a tutorial on building knowledge graphs. It provides an outline of the topics to be covered, including knowledge creation, hosting, curation, and deployment. It also introduces schema.org as a standard for knowledge graph schemas and types. The tutorial aims to introduce the knowledge graph lifecycle to both industry practitioners and academics.

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0% found this document useful (0 votes)
16 views91 pages

EKG Guide

The document describes a tutorial on building knowledge graphs. It provides an outline of the topics to be covered, including knowledge creation, hosting, curation, and deployment. It also introduces schema.org as a standard for knowledge graph schemas and types. The tutorial aims to introduce the knowledge graph lifecycle to both industry practitioners and academics.

Uploaded by

1977am
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd
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How To Build A Knowledge Graph

Semantics Conference 2019, Tutorial


Elias Kärle & Umutcan Simsek,
STI2, University of Innsbruck, September 9th, 2019
About Us

Elias Kärle Umutcan Simsek


PhD Student PhD Student
[email protected] [email protected]
Twitter: @eliaska Twitter: @umutsims

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 2


Acknowledgement

This tutorial is based on the work being done in the MindLab, an industrial research project for building
knowledge graphs to be consumed by conversational agents in domains like tourism.

An extensive version of the content of this tutorial can be found in our upcoming book “Knowledge
Graphs in Use” (working title)

https://mindlab.ai

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About the Tutorial
The tutorial aims to introduce our take on the knowledge graph lifecycle
Tutorial website: https://stiinnsbruck.github.io/kgt/

For industry practitioners:


An entry point to knowledge graphs. Several pointers for tackling different tasks on knowledge
graph lifecycle

For academics:
A brief overview of the literature, introduction of some tools, especially in knowledge curation.

Relevant Literature:
https://mindlab.ai/en/publications/ - An extensive list of the literature on knowledge graphs and their
applications with conversational agents

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Outline and Agenda
13:30 – 15:00 Part 1
1) Introduction
2) Knowledge Creation
3) Knowledge Hosting
15:00 – 15:30 Coffee Break
15:30 – 17:30 Part 2
4) Knowledge Curation
5) Knowledge Deployment & Discussion

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1. What is a Knowledge Graph?
TL;DR:
very large semantic nets that integrate various and heterogeneous information sources
to represent knowledge about certain domains of discourse.

Term coined by Google in 2012.

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1. What is a Knowledge Graph?
● A graph is a mathematical structure in which some pairs in a set of objects are somehow related. See
https://en.wikipedia.org/wiki/Graph_(discrete_mathematics)

● Knowledge: knowledge level vs symbol level


We ascribe knowledge to the actions of an agent.
At the symbol level resides implementations like graph-databases.

● An agent would interpret a knowledge graph to make rational decisions to take actions to reach its
goals

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1. What is a Knowledge Graph?
But wait, aren’t knowledge bases already doing this?
There are certain characteristic differences between KBs and KGs:

● KBs have a strict separation of TBox and Abox

● KGs do not have a big TBox, but have a very large ABox. There is not much to reason.

● No strict schema: Good for integrating heterogeneous sources, not so much in terms of data quality.

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1. Knowledge Graphs in the Wild
Name Instances Facts Types Relations
DBpedia (English) 4,806,150 176,043,129 735 2,813
YAGO 4,595,906 25,946,870 488,469 77
Freebase 49,947,845 3,041,722,635 26,507 37,781
Wikidata 15,602,060 65,993,797 23,157 1,673
NELL 2,006,896 432,845 285 425
OpenCyc 118,499 2,413,894 45,153 18,526
Google´s Knowledge Graph 570,000,000 18,000,000,000 1,500 35,000
Google´s Knowledge Vault 45,000,000 271,000,000 1,100 4,469
Yahoo! Knowledge Graph 3,443,743 1,391,054,990 250 800
Numerical Overview of some Knowledge Graphs, taken from [Paulheim, 2017]

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1. What is a Knowledge Graph?
● Knowledge graphs are not the first attempt for making data useful for automated agents by
integrating and enriching data from heterogeneous sources.

● Building knowledge graphs are expensive. Scaling them is challenging.

● A knowledge graph may cost 0,1 - 6 USD per fact [Paulheim, 2018]

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1. What is a Knowledge Graph?
Two main entry points for improving the quality of knowledge graphs:

Fixing TBox
- We accept schema.org (and its extensions) as golden standard. No problem here.

Fixing ABox
- This is where knowledge curation comes in.

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1. Schema.org

Created, recommended and maintained


by four major search engines providers

http://www.schema.
org/

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1. Schema.org

• Embedded in HTML source


• Microdata
• RDFa
• JSON-LD

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1. Schema.org

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1. Schema.org
{ "addressLocality": "Obsteig",

"@context": "http://schema.org", "postalCode": "6416",

"@type": "LocalBusiness", "addressCountry": "AT",

"name": "Imbiss-Stand \"Wurscht & Durscht\"", "telephone": "+43 664 / 26 32 319",

"geo": { "faxNumber": "",

"@type": "GeoCoordinates", "email": "[email protected]",

"latitude": "47.3006092921797", "url": "www.wudu-imbiss.at"

"longitude": "10.9136698539673" },

}, "description": "Der Imbisstand direkt


an der Bundesstraße B 189 in Obsteig
"address": { verwöhnt die Gäste mit qualitativ
hochwertigen \"Würschtln\" (Wurst) aller
"@type": "PostalAddress", Art.",
"streetAddress": "Unterer Mooswaldweg 2",

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1. Schema.org ● schema.org is organized
as a hierarchy of types
and properties

● the data model is


derived from RDFS
● domainIncludes,
rangeIncludes instead of
rdfs:domain, rdfs:range

● The ranges are


disjunctive

● Types are arranged in


multiple inheritance
hierarchy

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Knowledge Graph Building
Process Model

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1. Knowledge Graph Building: Task Model
What we will focus on,
today

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2. Knowledge Creation - Methodology
a.k.a Knowledge Acquisition: “...describes the process of extracting information from different sources,
structuring it, and managing established knowledge” - Schreiber et al.

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2. Knowledge Creation - Methodology
1) bottom-up: describes a first annotation process
a) analysis of a domain’s entities and their
(online) representation
b) defining a vocabulary (potentially by restricting and/or extending an already existing voc.)
c) “domain definition”, mapping to semantic vocabularies
d) annotation
e) evaluation and analysis of annotations

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2. Knowledge Creation - Methodology

2) domain specification modeling: reflects the results of step 1)


formalize the findings of step 1) in a
- unified
- exchangable
- machine-read and understandable way
⇒ Domain Specifications

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2. Knowledge Creation - Domain Specifications
“A domain specification is a document, defining syntactic and semantic constraints for schema.org*
annotations regarding a specific domain or application” [Holzknecht, 2019]
“[A] domain specification [is] a(n) (extended) subset of properties and restrict[s] the range of those
properties to a subset of subclasses of the range defined by schema.org*” [Simsek et al., 2017]
*or any other ontology
(extended: because we not only use schema.org, but also extensions of it if necessary)

Domain Specification are:


- annotation patterns
- a best practice for annotation users
- a “crutch” for annotation laymen
- a means of sharing a common understanding about a domain’s annotation application

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2. Knowledge Creation - Domain Specifications

- DSs are serialized


in SHACL

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2. Knowledge Creation - Methodology
3) top-down: applies models for further knowledge acquisition
a) mapping according to domain specifications
b) annotation development according to
domain specifications

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2. Knowledge Creation - tools - semantify.it
In the “early days” of our KG building efforts: three core questions (by our show-case users*) arised
* our efforts were always driven by educating people (real users, outside of academia, mostly from the industry/tourism) to create their own semantically rich content

1) which vocabulary to use


2) how to create JSON-LD files
3) how to publish those annotations (schema.org in JSON-LD files)

Tool, developed as a research project, grown to a full-stack annotation creation, validation and publication framework!

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2. Knowledge Creation - tools - semantify.it
1) Which vocabulary to choose? ⇒ schema.org
Still hundreds of classes and properties in schema.org?
Domain Specifications
- (Extended) subset of schema.org
- Domain expert builds
DS files as templates for editor
- Easy to use DS editor

Karlsruhe I Kärle
Ort&I Name
SimsekI Datum
I September 9, 2019 Seite 26
2. Knowledge Creation - tools - semantify.it
2) How to create those JSON-LD files?
- Semantify.it editor & instant annotations
- based on DS
- Inside platform (big DS files)
- or Instant Annotations (IA)
portable to every website (based on JS)
- mappers (RocketRML)
- wrapper framework
- semi-automatic
RocketRML ⇒

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2. RocketRML - A Quite Scalable RML Mapper [Simsek et al., 2019]

Based on RML [Dimou et al., 2014]:


● Easier to learn RML than a programming language
● Easy sharing
● Mapping can be visualized
● Mapfiles can be faster to write than code
● Easily change mappings

RML YARRRML Matey

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2. RocketRML - A Quite Scalable RML Mapper
● Resolving JOINs is the main bottleneck when it comes to mapping large input files.

● Each TriplesMap is iterated once

● Before starting the mapping process for a TriplesMap, we check whether the TriplesMap is in the
join condition of another TriplesMap. If it is, then we get the parent path of the join condition and
evaluate it. The value then is cached as path - value pair

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2. RocketRML - A Quite Scalable RML Mapper
● Then we map the data based on the TriplesMap as usual. If there is a join condition encountered
during the mapping, then value of the child and path to the parent is cached in the child

● After everything is mapped, we go through the two caches and join the objects with matching child
and parent values.

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2. RocketRML - Performance

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2. RocketRML - Source Code

https://semantifyit.github.io/RocketRML
/
Node.js implementation

Also available as Docker


container

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2. RocketRML - A Quite Scalable RML Mapper
● Quick demo (https://semantifyit.github.io/rml):
Raw data set (JSON): Mapping file (YARRRML*): Mapping result:

* YARRRML is the yaml-based, human readable,


translation of the actual turtle-based RML syntax.
(http://rml.io/yarrrml/matey/)

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2. Knowledge Creation - tools - semantify.it
2) How to create those JSON-LD files?
- wrapper framework

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2. Knowledge Creation - tools - semantify.it
2) How to create those JSON-LD files?
- semi automatic generation
- WordPress plugin
- “guess” the entities of
the web page through
machine learning
- model trained on
entities in our
knowledge graph

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2. Knowledge Creation - tools - semantify.it
3) How to publish annotations (schema.org in JSON-LD files)?
- copy&paste?
→ pasting content to website is no option for inexperienced users and does not scale

- semantify.it stores all created annotations and provides them over an API
(http://smtfy.it/sj7Fie2 OR http://smtfy.it/url/http//... OR http://smtfy.it/cid/374fm38dkgi...)

- publication of annotations over JS or into popular CMSs trough plugins (Wordpress, TYPO3 etc.)

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2. Knowledge Creation - tools - semantify.it
Evaluator:
validation & verification
- verification against schema.org
- verification against DS
- validation against website →

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2. Knowledge Creation - tools - semantify.it
Evaluator:
- validation against content of website

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3. Knowledge Hosting
In our context:

“Knowledge is represented in the form of semantically enriched data”

→ metadata is added to describe the data by using a (de-facto) standard vocabulary,


according to the principles of RDF

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1) identify resource with URI: e.g. “Resour
http://fritz.phantom.com ce”:
Fritz Ph
2) describe s, p, o antom
Resource Description Framework (RDF) Innsbru
ck
1.1.19?
?
Uni Inns
Subject Predicate Object
bruck
Fritz m is a rdf:type Person schema:Person
. co
m
Fritza nto has name schema:name Fritz Phantom schema:Text
z . ph
fr itFritz lives in xyz:lives Innsbruck schema:Place
p ://
htt Fritz was born in schema:born 1.1.19?? schema:Date
.a t
Fritz . g v works for xyz:works Uni Innsbruck schema:Organisation
. rol
ti
Innsbruckc k is a rdf:type town schema:Place
r u
n sb rdf:type
:/ /in Innsbruckat is in Tirol schema:Country
htt
p
. g v.
Tirol l … …
/ t iro
t p :/
ht Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 40
Resource Description Framework

what actually are the s, p, o?

Either a URL:
- to identify resources http://fritz.phantom.com
- to refer to properties of an ontology http://schema.org/name/
- to refer to types of an ontology http://schema.org/Person
or a literal
- String: “Fritz Phantom”
- Date: “1.1.19??”
- Number: 42

Karlsruhe I Kärle & Simsek I September 9, 2019 Page 41


Resource Description Framework

» 2 ways of representation (at least):

1. JSON-LD (for websites) 2. Graph Database (Knowledge Graph)

{“@context”:”http://schema.org” type schema:Person

“@type”:”Person”
http://fritz...
“@id”: “https://fritz.phantom.com”, schema:Organisation
“livesIn”:”Innsbruck”
worksFor
“born”:”19??-01-01” type

“worksFor”:{“@type”:”Organisation”, Uni IBK


“name”:”Uni Innsbruck”}}

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3. Knowledge Hosting
Two different approaches for storing semantically annotated data,
depending on the use case:

Either as
1) JSON-LD
or as
2) Knowledge Graph

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3. Knowledge Hosting
1) Storing as JSON-LD:

Use-case: storing semantically annotated data for usage on websites


→ the classical semantify.it use-case
→ many people use semantic annotations exclusively for website for SEO
Collection/creation: manual or semi-automatic editing, mapping, wrapper framework (was covered in
previous section) or even crawling of annotated web-sites
Storage: JSON-based document database, e.g. MongoDB
(JSON-LD is in fact JSON)

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 44


3. Knowledge Hosting
1) Storing as JSON-LD:
Pros:
- seamless and lightning-fast storage and retrieval (through advanced JSON indexing)
- lightweight (little processing power overhead)
- cost effective (starts with powerful free versions)
- good framework integration for web-development
- well documented
- huge community
Cons:
- no native RDF reasoning
- reasonig requires extensive programming and processing power overhead

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 45


3. Knowledge Hosting
1) Storing as JSON-LD:
Query:
- over an API, through GET request

Summary:
- works very well with tens of millions of JSON-LD files
- we replicate this data periodically into a graph database for “real” Knowledge Graph usage

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 46


3. Knowledge Hosting
2) Storing as Knowledge Graph:
Use-case: storing semantically annotated data as a full-fledged Knowledge Graph
→ Open Data repositories in tourism
→ enterprise Knowledge Graphs
→ advanced reasoning needs
→ AI, intelligent assistants
Collection/creation: due to potentially millions of annotation files: mapping, wrapper framework or also
crawling of annotated web-sites → semantify.it-broker

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 47


3. Knowledge Hosting
semantify.it-broker:
- crawling platform to collect
annotated data in
JSON-LD, Microdata, RDFa
- storage in graph database
- provision of SPARQL UI

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 48


3. Knowledge Hosting
2) Storing as Knowledge Graph:
Storage: due to RDF-nature, storage in graph database
with respect to:
- provenance
- historical data
- data duplication
In our current setting:
- historical data is kept im named graphs
- ~13 Billion statements

Karlsruhe I Kärle & Simsek I September 9, 2019 Seite 49


3. Knowledge Hosting
2) Storing as Knowledge Graph:
Storage: popular triple stores (https://www.w3.org/wiki/LargeTripleStores)

# Name # triples tested with


1 Oracle Spatial and Graph with Oracle Database 12c 1.08 T
2 AnzoGraph DB by Cambridge Semantics 1.065 T
3 AllegroGraph 1+ T
4 Stardog 50 B
5 OpenLink Virtuoso v7+ 39.8 B
6 GraphDB™ by Ontotext 17 B

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3. Knowledge Hosting
2) Storing as Knowledge Graph:
Pros:
- querying through native SPARQL endpoint
Cons:
- resource intensive
- expensive

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3. Knowledge Hosting
2) Storing as Knowledge Graph:
Query:
- SPARQL
http://graphdb.sti2.at:8080/sparql

Summary:
- overhead aside: great for big
knowledge graphs

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4. Knowledge Curation
● Knowledge Assessment

● Knowledge Cleaning

● Knowledge Enrichment

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4. Knowledge Curation - A Simple KR Formalism - TBox
1. Two disjoint and finite sets of type and property names T and P.

2. A finite number of type definitions isA(t1,t2) with t1 and t2 are elements of T. isA is reflexive and
transitive.

3. A finite number of property definitions:


○ hasDomain(p,t) with p is an element of P and t an element of T.

○ Range definition for a property p with p is an element of P, t1 and t2 are Elements of T. Simple
definition: Global property definition: hasRange(p,t2)
■ Refined definition: Local property definition: hasRange(p,t2) for domain t1, short:
hasLocalRange(p,t1,t2)

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4. Knowledge Curation - A Simple KR Formalism - ABox
1. A countable set of instance identifiers I. i, i1, and i2 are elements of I.

2. Instance assertions: isElementOf(i,t).isElementOf is a special property with build-in semantics. If


isA(t1,t2) AND isElementOf(i,t1) THEN isElementOf(i,t2).

3. Property value assertions: p(i1,i2).

4. Equality assertions: isSameAs(i1,i2). We allow another build-in property to express identity of


instances. It is symmetric, reflexive, and transitive.

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4. Knowledge Curation - Knowledge Assessment
● First step to improve the quality of a KG: Assess the situation

● Closely related to data quality literature

● Various dimensions for data quality assessment introduced [Batini & Scannapieco, 2006], [Färber et
al., 2018], [Pipino et al., 2002], [Wang, 1998], [Wang & Strong, 1996], [Wang et al., 2001], [Zaveri et
al., 2016])

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4. Knowledge Curation - Knowledge Assessment
1. accessibility 9. easy of manipulating 17. reputation,
2. accuracy (veracity) 10. easy of operation 18. security,
3. appropriate amount 11. easy of understanding 19. timeliness (velocity),
4. believability 12. flexibility 20. traceability,
5. completeness 13. free-of-error 21. understandability,
6. concise representation 14. interoperability 22. value-added, and
7. consistent representation 15. objectivity 23. variety
8. cost-effectiveness 16. relevancy **fitness for use**

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4. Knowledge Curation - Knowledge Assessment Tasks
● Two core assessment dimensions for Knowledge Graphs
○ Correctness
○ Completeness

● Three quality issue sources:


○ Instance assertions
○ Property value assertions
○ Equality assertions

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4. Knowledge Curation - Knowledge Assessment Tools
● WIQA (Web Information Quality Assessment Framework)
http://wifo5-03.informatik.uni-mannheim.de/bizer/wiqa/ [Bizer and Cyganiak, 2009]:

Allows defining policies to filter triples in a graph

● SWIQA (Semantic Web Information Quality Assessment Framework) [Fürber & Hepp, 2011]:

A set of SPARQL-based rules to assess data quality

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4. Knowledge Curation - Knowledge Assessment Tools

● LINK-QA [Guéret et al., 2012]

Benefits from network features to assess data quality (e.g. counting open chains to find wrongly
asserted isSameAs relationships)

● Sieve [Mendes et al., 2012] https://github.com/wbsg/ldif/

Uses data quality indicators, scoring functions and assessment metrics

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4. Knowledge Curation - Knowledge Assessment Tools
● Validata [Hansen et al., 2015] https://github.com/HW-SWeL/Validata

An online tool check the conformance of RDF graphs against ShEx (Shape Expressions)

● Luzzu (A Quality Assessment Framework for Linked Open Datasets) [Debattista et al., 2016]
https://eis-bonn.github.io/Luzzu/downloads.html

Allows declarative definitions of quality metrics and produces machine-readable assessment reports
based on Dataset Quality Vocabulary

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4. Knowledge Curation - Knowledge Assessment Tools
● RDFUnit [Kontokostas et al., 2014] https://github.com/AKSW/RDFUnit/ :

A framework that assesses linked data quality based on test cases defined in various ways (e.g.
RDFS/OWL axioms can be converted into constraints)

● SDType [Paulheim & Bizer, 2013] https://github.com/HeikoPaulheim/sd-type-validate

Uses statistical distributions to predict the types of instances. Incoming and outgoing properties are
used as indicators for the types of resources.

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4. Knowledge Curation - Knowledge Assessment Tools - Example
● Sieve for Data Quality Assessment

○ Data Quality Indicators: Various type of (meta)data that can be used to assess data quality e.g. data
about the dataset provider, user ratings

○ Scoring Functions: A set of functions that help the calculation of assessment metrics based on the
indicators

○ Assessment Metrics: Metrics like relevancy, timeliness that help users to assess the quality for an
intended use

○ Aggregate Metrics: Allow users to aggregate new metrics based on simple assessment metrics.

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4. Knowledge Curation - Knowledge Assessment Tools - Example
SCORING FUNCTION EXAMPLE
TimeCloseness measures the distance from the input date to the current (system)
date. Dates outside the range receive value 0, and dates that are
more recent receive values closer to 1.
Preference assigns decreasing, uniformly distributed, real values to each graph
URI provided as a space-separated list.
SetMembership assigns 1 if the value of the indicator provided as input belongs to
the set informed as parameter, 0 otherwise.
Threshold assigns 1 if the value of the indicator provided as input is higher
than a threshold informed as parameter, 0 otherwise.
IntervalMembership Assigns 1 if the value of the indicator provided as input is within
the interval informed as parameter, 0 otherwise.

Assessment Metrics in Sieve

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4. Knowledge Curation - Knowledge Cleaning
● The actions taken to improve the correctness of a knowledge graph.

● Two major steps:

○ Error detection
○ Error correction

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4. Knowledge Curation - Knowledge Cleaning Tasks
Detection and correction of wrong instance assertions: isElementOf(i.t)

Error Correction
i is not a proper instance identifier Delete assertion or correct i
i1 is not a valid instance identifier Delete assertion or correct t.
Instance assertion is semantically incorrect Delete assertion or find proper t.

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4. Knowledge Curation - Knowledge Cleaning Tasks
Detection and correction of wrong property value assertions p(i1,i2)

Error Correction
p is not a valid property Delete assertion or correct p
i1 is not a valid instance identifier Delete assertion or correct i1
i1 is not in any domain of p Delete assertion or add assertion isElementOf(i1,t)
where t is in a domain of p

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4. Knowledge Curation - Knowledge Cleaning Tasks
Detection and correction of wrong property value assertions p(i1,i2)

Error Correction
i2 is not a valid instance identifier delete assertion or correct i2
i2 is not in any range of p where i1 is an element of Delete assertion or
a domain of p.
Add assertion isElementOf(i1,t1) given that
hasLocalRange(t1,p,t2) and isElementOf(i2,t2)

or

Add assertion isElementOf(i2,t2) given that


hasLocalRange(t1,p,t2) and isElementOf(i1,t1)
Property assertion is semantically incorrect. Delete assertion or define a proper i2 or find a
better p or better i1

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4. Knowledge Curation - Knowledge Cleaning Tasks
Detection and correction of wrong equality assertions isSameAs(i1,i2)

Error Correction
i1 is not a valid instance identifier Delete assertion or correct i1
i2 is not a valid instance identifier Delete assertion or correct i2
Equality assertion is semantically wrong Delete assertion or loosen the semantics (e.g.
replace by a skos operator)

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4. Knowledge Curation - Knowledge Cleaning Tools
● HoloClean [Rekatsinas et al., 2017] https://hazyresearch.github.io/snorkel/blog/holoclean.html

An error detection and correction tool based on integrity constraints to identify conflicting and invalid
values, external information to support the constraints, and quantitative statistics to detect outliers.

● KATARA [Chu et al., 2015]

Learns the relationships between data columns and validate the learn patterns with the help of
existing Knowledge Bases and crowd, in order to detect errors in the data. Afterwards it also suggests
possible repairs.

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4. Knowledge Curation - Knowledge Cleaning Tools
● SDValidate [Paulheim & Bizer, 2014] https://github.com/HeikoPaulheim/sd-type-validate

Uses statistical distribution to detect erroneous statements that connect two resources. The
statements with less frequent predicate-object pairs are selected as candidates for being wrong.

● SHACL https://www.w3.org/TR/shacl/ and ShEx https://shex.io/shex-semantics/index.html

Two approaches that aim to verify RDF graphs against a specification (so called shapes).
For a comparison of two approaches, see Chapter 7 in [Gayo et al., 2017]

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4. Knowledge Curation - Knowledge Cleaning Tools
● LOD Laundromat [Beek et al., 2014] http://lodlaundromat.org/

Detects and corrects syntactic errors (e.g. bad encoding, broken IRIs), replaces blank nodes with IRIs,
removes duplicates in dirty linked open data and re-publishes it in a canonical format.

● TISCO [Rula et al., 2019]

A framework that tries to identify the time interval where a statement was correct. It uses external
knowledge bases and the web content to extract evidence to assess the validity of a statement for a
time interval.

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4. Knowledge Curation - Knowledge Enrichment
Improve the completeness of a knowledge graph by adding new statements

● Consists of following steps

○ Identifying new knowledge sources


○ Integration of TBox
○ Integration of Abox

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4. Knowledge Curation - Knowledge Enrichment
● Identifying knowledge sources

○ Open sources (e.g. LOD) - may be automated to some extent


○ Proprietary sources - usually very hard automate

● Integration of TBox
○ We assume that all data sources are mapped to schema.org
○ Non-RDF sources can be also mapped with the techniques described in Knowledge Creation

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4. Knowledge Curation - Knowledge Enrichment
● Integration of ABox

○ Issue-1: Identifying and resolving duplicates


○ Issue-2: Invalid property assertions (e.g. multiple disjoint values for unique properties, domain
and range violations)

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4. Knowledge Curation - Knowledge Enrichment
Different names for the same problem! [Getoor et al.,
2012]

Tackling issues:

● Entity resolution: Derive new isSameAs(i1,i2)


assertions and aligning their property assertions

● Conflict resolution: Resolve conflicting property


assertions

● Enrichment also has implications towards


cleaning!

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4. Knowledge Curation - Knowledge Enrichment Tasks
● Identifying and resolving duplicates
● Resolving conflicting property assertions

can be realized by

● addition of missing instance assertions: isElementOf(i,t)


● addition or deletion of property value assertions: p(i1,i2)
● addition of missing equality assertions: isSameAs(i1,i2)

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4. Knowledge Curation - Knowledge Enrichment Tools
Duplication detection and resolution tools

● Dedupe: https://github.com/dedupeio/dedupe

A python library that uses machine learning to find duplicates in a dataset and to link two datasets.

● Duke [Garshol & Borge, 2013]: https://github.com/larsga/Duke

Uses various similarity metrics to detect duplicates in a dataset or link records between two datasets based
on a given configuration. The configuration parameters can be

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4. Knowledge Curation - Knowledge Enrichment Tools
Duplication detection and resolution tools

● Legato [Achichi et al., 2017] https://github.com/DOREMUS-ANR/legato

A recording linkage tool that utilizes Concise Bounded Description* of resources for comparison.
*https://www.w3.org/Submission/2004/SUBM-CBD-20040930/#r6

● LIMES [Ngomo & Auer, 2011] https://github.com/dice-group/LIMES

A link discovery approach that benefits from the metric spaces (in particular triangle inequality) to
reduce the amount of comparisons between source and target dataset.

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4. Knowledge Curation - Knowledge Enrichment Tools
Duplication detection and resolution tools

● SERIMI [Araújo et al., 2011] https://github.com/samuraraujo/SERIMI-RDF-Interlinking

A link discovery tool that utilizes string similarity functions on “label properties” without a prior
knowledge of data or schema

● SILK [Volz et al., 2009] http://silkframework.org/

A link discovery tool with declerative linkage rules applying different similarity metrics (e.g. string,
taxonomic, set) that also supports policies for the notification of datasets when one of them
publishes new links to others.

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4. Knowledge Curation - Knowledge Enrichment Tools
Conflict resolution tools

● FAGI [Giannopoulos et al., 2014] https://github.com/GeoKnow/FAGI-gis

A framework for fusing geospatial data. It suggests fusion strategies based on two datasets with
geospatial data and a set of linked entities.

● KnoFuss [Nikolov et al., 2008] http://technologies.kmi.open.ac.uk/knofuss/

A framework that allows the application of different methods on different attributes in the same
dataset for identification of duplicates and resolves inconsistencies caused by the fusion of linked
instances.

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4. Knowledge Curation - Knowledge Enrichment Tools
Conflict resolution tools

● ODCleanStore [Knap et al., 2012]

A framework that contains a fusion module that allows users to configure conflict resolution policies
based on different functions (e.g. AVG, MAX, CONCAT) that can be applied on conflicting property
values.

● Sieve [Mendes et al., 2012]


Sieve has a data fusion module that supports different fusion functions on selected property values. It
also utilizes the assessment values from the assessment module in the fusion process.

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4. Knowledge Curation - Knowledge Enrichment Tools - Demo

Duplication detection and resolution with Duke

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5. Knowledge Deployment
- training of ML models based on KGs
- due to the RDF nature data in KGs is semantically described
- good training data for ML models
- conversational agents
- chatbots
- intelligent personal assistants
- question answering over LinkedData
- OpenData sharing platforms
- currently Open(Government)Data often makes little sense
(scanned pdfs, weird spreadsheets,csv, …)
- LinkedData is self explaining (see lod-cloud https://lod-cloud.net)

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5. Knowledge Deployment - discussion
- are you using KGs in your enterprise / research already?

- are you planning to?

- where do you see the potential

- where do you see challenges / risks?

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