As Level Chemistry Notes 3
As Level Chemistry Notes 3
Homologous Series
There is an almost infinite variety of chains, branches and rings able to form
A functional group is a specific atom or group of atoms which confer certain physical
and chemical properties onto the molecule
Organic molecules are classified by the dominant functional group on the molecule
Organic compounds with the same functional group, but with each successive member
different by CH2 are called a homologous series
o Every time a carbon atom is added to the chain, two hydrogen atoms are also
added, which is why the successive members differ by CH2
Hydrocarbons
Hydrocarbons are compounds that are made up of carbon and hydrogen atoms ONLY
Alkanes
Curly arrows show electron pairs moving from the source (eg. a
nucleophile) to its destination (eg. an electrophile)
A free-radical substitution reaction is a reaction in which halogen
atoms substitute for hydrogen atoms in alkanes
It involves the initiation, propagation and termination steps
Electrophilic addition
Straight-chain
Branched
Cyclic organic molecules are those in which the carbon atoms are
connected to each other in a ring shape
Hybridised Atoms: Shapes & Bond Angles in Molecules
Each carbon atom has four electrons in its outer shell (electronic configuration: 1s22s22p2)
Carbon atoms share these four electrons in four covalent bonds with other atoms to achieve
a full outer shell configuration
These electrons are found in orbitals within the respective atoms
When forming a covalent bond, the orbitals overlap in such a way to form two types of bonds
Hybridisation: sp3
The electron pair in a σ bond is found in a region of space between the nuclei of the two atoms
that are sharing the electrons
The electrostatic attraction between the electrons (negatively charged) and the
two nuclei (positively charged) holds the two atoms together
Carbon atoms that form four σ bonds are said to be sp3 hybridised
The four pairs of electrons around each carbon repel each other forcing the molecule to adopt a
configuration in which the bonding pairs of electrons are as far away from each other as
possible
Hybridisation: sp2
When carbon atoms use only three of their electron pairs to form a σ bond, they are said to
be sp2 hybridised
o Each carbon atom will have a p orbital with contains one spare electron
When the p orbitals of two carbon atoms overlap with each other, a π bond is formed (the π
bond contains two electrons)
The two orbitals that form the π bond lie above and below the plane of the two carbon atoms to
maximise bond overlap
The three bonding pair of electrons are in the plane of the molecule and repel each other
The molecule adopts a planar arrangement with bond angles of 120 o
Hybridisation: sp
Carbon atoms can also use only one of their electron pair to form a σ bond, in which case the
carbon atoms are said to be sp hybridised
o Each carbon atom will have two p orbitals with one spare electron each
When the four p orbitals of the carbon atoms overlap with each other, two π bonds are formed
(each π bond contains two electrons)
The two orbitals that form the π bond lie above and below the plane of the carbon atoms
The two orbitals of the other π bond lie in front and behind the plane of the atoms
o This maximises the overlap of the four p orbitals
The molecule adopts a linear arrangement with bond angles 180 o
σ bonds
Sigma bonds are formed from the end-on overlap of atomic orbitals
The pair of electrons is found between the nuclei of the two atoms
The electrostatic attraction between the electrons and nuclei bonds the atoms to each
other
The diagram below shows the arrangement of the σ bond in sp3, sp2 and sp hybridised carbon
atoms
The σ orbitals are formed from the end-on overlap of the atomic orbitals resulting in
symmetrical electron density on the atoms
π bonds
Pi (π) bonds are formed from the sideways overlap of p orbitals
The two lobes that make up the π bond lie above and below the plane of the atoms
o This maximises overlap of the p orbitals
The diagram below shows the arrangement of the π bond in sp3, sp2 and sp hybridised carbon
atoms
Planar molecules have all their atoms in the same plane
Chain isomerism
Positional isomerism
Functional group isomerism
Chain isomerism
Positional isomerism
Stereoisomers are compounds that have the same atoms connected to each other, however the
atoms are differently arranged in space
There are two types of stereoisomerism:
o Geometrical (cis/trans) isomerism
o Optical isomerism
Just like the left hand cannot be superimposed on the right hand,
enantiomers too are non-superimposable
Enantiomers are mirror images of each other
Both molecules are made up of the same atoms which are bonded to each
other identically, however the chiral centre (carbon with four different
groups) gives rise to optical isomerism
When the molecule contains more than one chiral centre (asymmetric
carbon) more than two optical isomers will be formed
If there are two chiral centres, each chiral centre will rotate the
plane of polarised light clockwise and anticlockwise
There are four possible optical isomers
Chiral centres in cyclic molecules
Identify chirality
Molecules with restricted rotation about the C-C bond can have
geometrical isomers
This includes unsaturated and cyclic compounds
o Eg. alkenes and cyclopentane
When the groups are positioned on the same side of the C-C double
bond, the compound is a cis isomer
When the groups are positioned on opposite sides of the C-C double
bond the compound is a trans isomer
Deducing Isomers of a Compound
There is no restricted bond rotation around the C-C bond and there is
no chiral centre so it is structural isomerism
Alkanes are combusted (burnt) on a large scale for their use as fuels
They also react in free-radical substitution reactions to form more
reactive halogenoalkanes
Complete combustion
Incomplete combustion
Initiation step
In the initiation step the Cl-Cl or Br-Br is broken by energy from the UV
light
This produces two radicals in a homolytic fission reaction
The first step of the free-radical substitution reaction is the initiation step
in which two free radicals are formed by sunlight
Propagation step
Free radicals are very reactive and will attack the unreactive
alkanes
A C-H bond breaks homolytically (each atom gets an electron
from the covalent bond)
Termination step
The termination step is when the chain reaction terminates (stops) due
to two free radicals reacting together and forming a single unreactive
molecule
Crude oil is initially separated into fractions with similar boiling points in
a process called fractional distillation
The low-molecular mass alkanes formed make good fuels and are in
high demand
The low-molecular mass alkenes are more reactive than alkanes due to
their double bond
This makes them useful for the chemical industry as the starting
compounds (feedstock) for making new products
Eg. they are used as monomers in polymerisation reactions
Strength of C-H bonds
Carbon monoxide
Carbon monoxide is formed in the incomplete combustion of alkanes
inside a car engine
Due to lack of enough oxygen in the engine, some of the carbon is only
partially oxidised to CO instead of carbon dioxide (CO2)
CO is a toxic and odourless gas which can cause dizziness, loss of
consciousness and eventually death
Oxides of nitrogen
Normally, nitrogen is too unreactive to react with oxygen in air
However, in a car’s engine, high temperatures and pressures are reached causing the oxidation
of nitrogen to take place:
The oxides of nitrogen are then released in the car’s exhaust fumes into the atmosphere
Car exhaust fumes also contain unburnt hydrocarbons from fuels and their oxides (VOCs)
In air, the nitrogen oxides can react with these VOCs to form peroxyacetyl nitrate (PAN) which is
the main pollutant found in photochemical smog
Nitrogen oxides can also dissolve and react in water with oxygen to form nitric acid which is a
cause of acid rain
Acid rain can cause corrosion of buildings, endangers plant and aquatic life (as lakes and rivers
become too acidic) as well as directly damaging human health
Catalytic removal
To reduce the amount of pollutants released in cars’ exhaust fumes, many cars are now fitted
with catalytic converters
Precious metals (such as platinum) are coated on a honeycomb to provide a large surface area
The reactions that take place in the catalytic converter include:
Oxidation of CO to CO2:
2CO + O2 → 2CO2
or
Elimination reaction
The eliminated H+ in HBr reacts with the ethanolic OH- to form water
The eliminated Br- in HBr reacts with Na+ to form NaBr
Dehydration reaction
Cracking
Alkenes are very useful compounds as they can undergo many types of
reactions
They can therefore be used as starting molecules when making new
compounds
Electrophilic addition
When shaken with cold dilute KMnO4 the pale purple solution
turns colourless and the product is a diol
When alkenes are reacted with hot concentrated KMnO4 the
conditions are harsher causing the C-C double bond to
completely break
The O-H groups in the diol formed are further oxidised
to ketones, aldehydes, carboxylic acids or carbon dioxide gas
The actual products formed depend on what is bonded to the
carbon atoms in the alkene
Alkenes can be oxidised by cold dilute and hot concentrated KMnO4 to
give different products
The above reactions can be used to predict where the double bond in a
larger molecule is
Addition polymerisation
The double bond in alkenes is an area of high electron density (there are
four electrons found in this double bond)
This makes the double bond susceptible to attack by electrophiles
(electron-loving species)
An electrophilic addition is the addition of an electrophile to a double
bond
Inductive effect
Therefore, the nucleophile will bond to the C-C carbon atom with the
highest number of alkyl groups bonded to it
Substitution of alcohols
SN1 reactions
In tertiary halogenoalkanes the carbon that is attached to the halogen
is bonded to three alkyl groups
These halogenoalkanes undergo nucleophilic substitution by
an SN1 mechanism
In the first step, the C-X bond breaks heterolytically and the
halogen leaves the halogenoalkane as an X- ion (this is
the slow and rate-determining step)
This forms a tertiary carbocation (which is a tertiary carbon atom
with a positive charge)
In the second step, the tertiary carbocation is attacked by
the nucleophile
Carbocations
Alcohols are compounds that contain at least one hydroxy (-OH) group
The general formula of alcohols is CnH2n+1OH
Alcohols can be prepared by a wide range of chemical reactions
Oxidation of alkenes
Cold, dilute KMnO4 is a mild oxidising agent and oxidises alkenes
The C-C double bond is not fully broken and a diol is formed
The halide atom in halogenoalkanes can be substituted when heated with aqueous NaOH in
a nucleophilic substitution reaction
Reduction of aldehyde & ketones
Aldehydes and ketones can be reduced by reducing agents such as NaBH4 or LiAlH4
The carbon attached to the hydroxy group is bonded to one other alkyl group
The carbon attached to the hydroxy group is bonded to two other alkyl groups
Hydrolysis of ester
Esters are made by a condensation reaction between an alcohol and a carboxylic acid
When an ester is heated with dilute acid or alkali, hydrolysis will take place and the carboxylic
acid and alcohol will be reformed
Combustion of alcohols
Substitution of alcohols
When an alcohol reacts with a reactive metal such as sodium (Na), the
oxygen-hydrogen bond in the hydroxy group breaks
Though the reaction is less vigorous than sodium reacting with
water, hydrogen gas is given off and a basic compound (alkoxide) is
formed
The longer the hydrocarbon chain in the alcohol, the less vigorous the
reaction becomes
Dehydration of alcohols
Classifying primary, secondary and tertiary alcohols and alcohols with more than one alcohol
group
Only primary and secondary alcohols can get oxidised when mildly oxidised with acidified
K2Cr2O7
o Primary alcohols get mildly oxidised to aldehydes
o Secondary alcohols get mildly oxidized to ketones
Tertiary alcohols do not undergo oxidation with acidified K2Cr2O7
Therefore, only the oxidation of primary and secondary alcohols will change the colour of
K2Cr2O7 solution as the orange Cr2O72- ions are reduced to green Cr3+ ions
Only propan-1-ol and propan-2-ol, which are primary and secondary alcohols respectively,
can get oxidised, turning the orange solution green; no colour change is observed with 2-
methyl-propan-2-ol, which is a tertiary alcohol
Tri-iodomethane (also called iodoform) forms a yellow precipitate with methyl ketones
o Methyl ketones are compounds that have a CH3CO-group
o Ethanal also contains a CH3CO- group and therefore also forms a yellow precipitate with
iodoform
The reagent is heated with an alkaline solution of iodine
This reaction involves a halogenation and hydrolysis step
o In the halogenation step, all three H-atoms in the -CH3 (methyl) group are replaced for
iodine atoms, forming -CI3
o The intermediate compound is hydrolysed by alkaline solution to form a sodium salt
(RCO2- Na+) and a yellow precipitate of CHI3
The reaction of methyl ketones with iodoform results in the formation of a yellow
CHI3 precipitate
Iodoform & alcohols
The position of a secondary alcohol can be deduced by reacting the compound with alkaline I2
If the -OH group is on the carbon atom next to a methyl group, it will firstly get oxidised to
CH3CH(OH)- by the alkaline solution
This will result in the formation of a methyl ketone RCOCH3
The methyl ketone will then first get halogenated and then hydrolysed to form the sodium salt
and the yellow precipitate
If no yellow precipitate is formed, then this means that the secondary alcohol is not on a carbon
next to a methyl group
The secondary alcohol butan-2-ol will firstly get oxidised to the methyl ketone butanone which
will form a yellow precipitate when reacted with alkaline I2
Alcohols have a low degree of dissociation
The position of the equilibrium lies to the left, meaning that there are
far more alcohol molecules than RO- and H+ ions
When water dissociates, the position of the equilibrium still lies to
the left, but there are more H+ ions compared to the dissociation of
alcohols
Oxidising agents
Synthesis of aldehydes
Nucleophilic addition
The nucleophilic addition of hydrogen cyanide to carbonyl compounds is a two-step
process
In step 1 the cyanide ion attacks the carbonyl carbon to form a negatively charged
intermediate
In step 2 the negatively charged oxygen atom in the reactive intermediate quickly reacts
with aqueous H+ (either from HCN, water or dilute acid) to form 2-hydroxynitrile
Testing for Carbonyls: 2,4-DNPH
Fehling’s solution
Fehling’s solution is an alkaline solution containing copper(II) ions which act as the
oxidising agent
When warmed with an aldehyde, the aldehyde is oxidised to a carboxylic acid and
the Cu2+ ions are reduced to Cu+ ions
Tollens’ reagent
In K2Cr2O7 the orange dichromate ions (Cr2O72-) are reduced to green Cr3+ ions
In KMnO4 the purple manganate ions (MnO4-) are reduced to colourless
Mn2+ ions
Oxidation of primary alcohols (1) and aldehydes (2) gives carboxylic acids
Hydrolysis of nitriles
Carboxylic acids can also be prepared from the hydrolysis of nitriles using either dilute
acid or dilute alkali followed by acidification
o Hydrolysis by dilute acid results in the formation of a carboxylic acid and
ammonium salt
o Hydrolysis by dilute alkali results in the formation of a sodium carboxylate salt
and ammonia; Acidification is required to change the carboxylate ion into a
carboxylic acid
The -CN group at the end of the hydrocarbon chain is converted to a -COOH group
Hydrolysis of esters
Esters are formed from the condensation reaction between an alcohol and carboxylic
acid
Hydrolysis of esters by dilute acid or dilute alkali and heat followed by
acidification will reform the alcohol and carboxylic acid
o Hydrolysis by dilute acid, is a reversible reaction and an equilibrium is
established
o Hydrolysis by dilute alkali is an irreversible reaction as all the ester is broken
down to form a sodium carboxylate salt and an alcohol; acidification is required
to change the carboxylate ion into a carboxylic acid
Reactions of Carboxylic Acids
Carboxylic acids are weak acids as they do not completely dissociate in water
This means that the position of the equilibrium lies to the left and that the concentration
of H+ is much smaller than the concentration of the carboxylic acid
The solution has a pH value of less than 7
Carboxylic acids are weak acids that do not fully dissociate in water, the position
of the equilibrium lies to the left
Carboxylic acids are reactive compounds which can undergo many types of reactions
including:
Esters are compounds with an -COOR functional group and are characterised by
their sweet and fruity smells
They are prepared from the condensation reaction between a carboxylic
acid and alcohol with concentrated H2SO4 as catalyst
The first part of the ester’s name comes from the alcohol and the second part of the
name comes from the carboxylic acid
E.g. Propanol and ethanoic acid will give the ester propyl ethanoate
Hydrolysis of Esters
Esters can be hydrolysed to reform the carboxylic acid and alcohol by either dilute
acid or dilute alkali and heat
When an ester is heated under reflux with dilute acid (eg. sulfuric acid) an equilibrium
mixture is established as the reaction is reversible
Ester hydrolysis by dilute acid is a reversible reaction forming carboxylic acid and
alcohol
However, heating the ester under reflux with dilute alkali (eg. sodium hydroxide) is
an irreversible reaction as the ester is fully hydrolysed
This results in the formation of a sodium carboxylate salt which needs
further acidification to turn into a carboxylic acid
o The sodium carboxylate (-COO-) ion needs to get protonated by an acid (such as
HCl) to form the carboxylic acid (-COOH)
Nitrogen Compounds
Production of Amines
Production of Nitriles
Production of Hydroxynitriles
Hydroxynitriles are compounds with both a hydroxy (-OH) and cyanide (-CN) functional
group
They can be prepared from the nucleophilic addition of aldehydes and ketones
2-hydroxy-2-methylpropanenitrile
Nitriles are hydrolysed by either dilute acid or dilute alkali followed by acidification to
give a carboxylic acid
o Hydrolysis is the breakdown of a compound using water
Hydrolysis of nitriles
Nitriles are hydrolysed by either dilute acid or dilute alkali followed by acidification
The -CN group at the end of the hydrocarbon chain is converted to a -COOH group
Polymerisation
Addition polymerisation
Just like in other addition reactions of alkenes, the π-bond in each C-C bond
breaks and then the monomers link together to form new C-C single bonds
A repeat unit is the smallest group of atoms that when connected one after the other
make up the polymer chain
You are expected to be able to identify organic functional groups, their properties, how
to test for their presence and how they are made
Functional groups
The table below summarises the tests to identify the presence of certain functional
groups and the reactions to make them
You should also be aware of the different type of reactions that functional groups can
undergo
Oxidising & reducing agents
Certain functional groups only react with specific oxidising and reducing agents which
you should be aware of
Tests
The test also requires you to distinguish between the different tests that identify
functional groups in a compound
Analytical Chemistry
Interpreting IR Spectra
The molecular ion can further fragment to form new ions, molecules, and radicals
The smaller and more positively charged fragment ions will be detected first as they will
get deflected the most and are more attracted to the negative pole of the magnet
Each fragment corresponds to a specific peak with a particular m/e value in the mass
spectrum
The base peak is the peak corresponding to the most abundant ion
Isotopes
Isotopes are different atoms of the same element that contain the same number
of protons and electrons but a different number of neutrons.
o These are atoms of the same elements but with different mass number
o For example, Cl-35 and Cl-37 are isotopes as they are both atoms of the same
element (chlorine, Cl) but have a different mass number (35 and 37 respectively)
Mass spectroscopy can be used to find the relative abundance of the isotopes
experimentally
The relative abundance of an isotope is the proportion of one particular isotope in a
mixture of isotopes found in nature
o For example, the relative abundance of Cl-35 and Cl-37 is 75% and 25%
respectively
o This means that in nature, 75% of the chlorine atoms is the Cl-35 isotope and
25% is the Cl-37 isotope
The heights of the peaks in mass spectroscopy show the proportion of each isotope
present
Calculating Relative Atomic Mass
Isotopes are different atoms of the same element that contain the same number
of protons and electrons but a different number of neutrons.
o These are atoms of the same elements but with different mass numbers
Because of this, the mass of an element is given as relative atomic mass (Ar) by using
the average mass of the isotopes
The relative atomic mass of an element can be calculated by using the relative
abundance values
o The relative abundance of an isotope is either given or can be read off the mass
spectrum
Mass Spectrometry: Deducing Molecular Formula
The [M+1] peak is a smaller peak which is due to the natural abundance of the isotope
carbon-13
The height of the [M+1] peak for a particular ion depends on how many carbon atoms
are present in that molecule; the more carbon atoms, the larger the [M+1] peak is
o For example, the height of the [M+1] peak for an hexane (containing six carbon
atoms) ion will be greater than the height of the [M+1] peak of an ethane
(containing two carbon atoms) ion
The molecular ion peak can be used to identify the molecular mass of a compound
However, different compounds may have the same molecular mass
To further determine the structure of the unknown compound, fragmentation is used
Fragments may appear due to the formation of characteristic fragments or
the loss of small molecules
o For example, a peak at 29 is due to the characteristic fragment C2H5+
o Loss of small molecules give rise to peaks at 18 (H2O), 28 (CO), and 44 (CO2)
Alkanes
Simple alkanes are fragmented in mass spectroscopy by breaking the C-C bonds
M/e values of some of the common alkane fragments are given in the table below
Mass spectrum showing fragmentation of alkanes
Halogenoalkanes
Halogenoalkanes often have multiple peaks around the molecular ion peak
This is caused by the fact that there are different isotopes of the halogens
Mass spectrum showing different isotopes of the halogens in the molecular ion
Alcohols
Alcohols often tend to lose a water molecule giving rise to a peak at 18 below the
molecular ion
Another common peak is found at m/e value 31 which corresponds to the CH2OH+
fragment
For example, the mass spectrum of propan-1-ol shows that the compound has
fragmented in four different ways:
The [M+1] peak is caused by the presence of the carbon-13 (13C) isotope in the molecule
Carbon-13 makes up approximately 1.1% of all carbon atoms
Therefore, the [M+1] peak is much smaller than the M peak as the isotope is less
common
o The ratio of 13C to 12C is approximately 1:99
Thus, the greater the number of carbon atoms present in a molecule the greater the
height of the [M+1] peak
The number of carbon atoms, n, in a compound can be deduced using the [M+1] peak
and the following formula:
The presence of bromine or chlorine atoms in a compound gives rise to a [M+2] and
possibly [M+4] peak
Chlorine
Bromine