Artificial Intelligence and The Medical Physicist Welcome To The
Artificial Intelligence and The Medical Physicist Welcome To The
Artificial Intelligence and The Medical Physicist Welcome To The
sciences
Review
Artificial Intelligence and the Medical Physicist: Welcome to
the Machine
Michele Avanzo 1, *, Annalisa Trianni 2 , Francesca Botta 3 , Cinzia Talamonti 4 , Michele Stasi 5 and Mauro Iori 6
1 Medical Physics Department, Centro di Riferimento Oncologico di Aviano (CRO) IRCCS, 33081 Aviano, Italy
2 Medical Physics Unit, Ospedale Santa Chiara APSS, 38122 Trento, Italy; [email protected]
3 Medical Physics Unit, Istituto Europeo di oncologia IRCCS, 20141 Milan, Italy; [email protected]
4 Department Biomedical Experimental and Clinical Science “Mario Serio”, University of Florence,
50134 Florence, Italy; [email protected]
5 Medical Physics Unit, A.O. Ordine Mauriziano di Torino, 10128 Torino, Italy; [email protected]
6 Medical Physics Unit, Azienda USL-IRCCS di Reggio Emilia, 42122 Reggio Emilia, Italy; [email protected]
* Correspondence: [email protected]
Abstract: Artificial intelligence (AI) is a branch of computer science dedicated to giving machines or
computers the ability to perform human-like cognitive functions, such as learning, problem-solving,
and decision making. Since it is showing superior performance than well-trained human beings in
many areas, such as image classification, object detection, speech recognition, and decision-making,
AI is expected to change profoundly every area of science, including healthcare and the clinical
application of physics to healthcare, referred to as medical physics. As a result, the Italian Association
of Medical Physics (AIFM) has created the “AI for Medical Physics” (AI4MP) group with the aims of
coordinating the efforts, facilitating the communication, and sharing of the knowledge on AI of the
medical physicists (MPs) in Italy. The purpose of this review is to summarize the main applications
of AI in medical physics, describe the skills of the MPs in research and clinical applications of AI,
Citation: Avanzo, M.; Trianni, A.;
and define the major challenges of AI in healthcare.
Botta, F.; Talamonti, C.; Stasi, M.; Iori,
M. Artificial Intelligence and the
Keywords: artificial intelligence; deep learning; medical physicist; machine learning; big data
Medical Physicist: Welcome to the
Machine. Appl. Sci. 2021, 11, 1691.
https://doi.org/10.3390/app11041691
The MPs will be more and more involved in the use of the new AI applications in medicine
for patient diagnosis and treatment, with the primary scope of guaranteeing the quality of
the whole process and environment [9].
The Italian Association of Medical Physics (AIFM) has created the AI for Medical
Physics (AI4MP) task-group, with the aims of coordinating the efforts, facilitating the
communication, and sharing of the knowledge on AI of the MPs in Italy. The aim of the
present review is to summarize the point of view of the coordinators of AI4MP on the
role and the involvement of MPs in the new AI world by defining the challenges of AI in
healthcare for the MPs and by describing the skills the MPs can offer in this field. This will
be done with a question in mind: if AI is welcomed by the MPs or vice versa.
computerized clinical decision support systems (CDSS), which aid in decision-making [30].
In this way, pipelines can be designed to continuously and automatically extract informa-
tion and improve the accuracy of patient outcome prediction [31].
and assess also rheumatological manifestations, bone erosions, and cartilage loss [68]. The
development of digital pathology, due to the introduction of whole-slide scanners, and
the progression of computer vision algorithms have significantly grown the usage of AI
to perform tumor diagnosis, subtyping, grading, staging, and prognostic prediction. In
the big-data era, the pathological diagnosis of the future could merge proteomics and
genomics [69]. Spatial metabolomics is a new field aiming at measuring the distribution of
molecules, such as metabolites, lipids, and drugs, within body structures, using imaging,
such as mass spectrometry, where each pixel is represented by its mass spectrum [70].
Being characterized by a large amount of high dimensional data, including overlapping
and noisy molecular signals, this technique looks promising for the application of AI [71].
Other applications that could become a focus of AI in the near future are computer
vision [72], dealing with object detection and feature recognition in digital images, and
virtual assistants [73], employing speech recognition in neuroradiology [74], radiology, and
beyond. By augmented reality, the operator’s perception of an operating room environment
could be enhanced with AI-generated information [75].
3.2. Therapy
ML can be useful to carry out many of the activities during the whole workflow of
radiotherapy, starting with the choice of the optimal radiation approach, e.g., choice of
proton vs. photon [76]. A convolutional neural network (CNN) can automatically segment
targets and organs at risk in radiotherapy [77]. ML-based auto-planning [78,79] mimics
the iterative plan design, evaluation, and adjustments made by experienced operators
with the goal of improving quality and efficiency and reducing inter-user variability [46].
Knowledge-based approaches leverage a large database of prior treatment plans (up to
thousands) to develop associations between geometric and dosimetric parameters from
a selection of previous plans in order to determine achievable dose constraints or dose
distributions that can be used for benchmarking the quality of plans [9,80]. ML-based auto
planning was also developed for brachytherapy [81].
The dose distribution from radiation therapy treatment can be predicted by DL in
order to speed up the optimization [82] or determine the best achievable dose distribution
from the patient image [83]. ML was applied to predict dose in brachytherapy [84] and
in vivo measured dose in intraoperative radiotherapy [85].
Recently, dosomics, the application of radiomics or DL to the analysis of the dose
distribution, eventually corrected into biologically effective dose to account for diverse
fractionation, was investigated for the ability to predict side effects of radiation therapy
[86,87]. Radiomics can also be applied to cone-beam CT (CBCTs) acquired for image-
guidance of the radiotherapy treatment, making these images useful for data mining [88].
A major concern of radiotherapy is the change in the anatomy of the patient during
therapy, which could result in unwanted dose changes. In this case, re-planning of the
treatment is warranted. ML can identify significant changes in patient anatomy during
radiotherapy [19] and predict patients who would benefit from adaptive radiotherapy
(ART) [89]. Eventually, by using information extracted from radiomics voxel-based analy-
ses, sensitive/resistant tumor sub-volumes might be identified, requiring higher (or lower)
dose, thus enabling dose painting according to a “radiomic target volume” (RTV) [90].
In nuclear medicine, radiometabolic therapy with unsealed (radiopharmaceuticals) or
sealed sources (microspheres, etc.) is of growing importance. The application of AI in this
area can improve dosimetry by accounting for patients’ anatomy, activity distribution, and
tissue density, and planning, in order to administer the highest dose to the target while
sparing critical organs, as well as for predicting treatment response [91]. Methodological
studies have been performed to investigate the robustness of dosomic approaches [92].
poorly represented in the training dataset. This could potentially aggravate healthcare
disparities [103].
Another source of unreliability stems from the constant evolving of the patterns of
clinical practice over time due to the introduction of new treatment approaches, tech-
nologies, or gradual changes in patient population (e.g., percentage of patients with a
given histological subtype). This may result in increased unreliability of the AI system’s
recommendations or prediction over time [30]. The “half-life” of the relevance of clinical
data used for training is thought to be typical of 4 months [111].
4.2. Interpretability
Interpretability is the level of understanding of the information that the model extracts
from input data, why it is extracted, and how it arrives at its output [2]. ML models are
usually perceived as black boxes by the users and clinicians, meaning that they have a
low level of interpretability. This issue is exacerbated for deep neural networks, given the
complicated multi-layer structures and numerous numerical operations performed by each
layer, and hinders the application of AI in the clinic.
Graph approaches can be of help to improve the interpretability of ML and DL
methods. The activation maps extracted by the CNN, overlaid with the image analyzed,
can show on which image regions the CNN focuses strongly for prediction [112]. For ML
classifiers, interpretation can be facilitated by identification of the most important variables
or features for prediction and comparing their values in illustrative cases, e.g., patients
with a poor and good prognosis, as done in many radiomics studies, e.g., [86,113,114]. In
unsupervised learning, some methods, like t-distributed stochastic embedding (t-SNE),
allow visualization of high-dimensional data by giving each data point a location in a two
or three-dimensional map [20].
5. Role of MP
5.1. Imaging
As already underlined in this paper, one of the major tasks in which the MP is deeply
involved in the imaging field is the optimization process, i.e., finding the balance between
dose and image quality.
MP understands the components of an imaging device used and the basic physical
mechanisms at the root of signal change and image contrast and comprehends the tech-
nical and/or physiological artifacts limiting the performance [4,118]. Moreover, the MP
understands the limitations and potential pitfalls of dose measurement, calculation, and
prediction [90]. Thus, MP has knowledge and skills that are of value for the development,
implementation, and use of AI in imaging.
AI-based systems have been developed to estimate patient dose. MP shall validate and
periodically check these systems to avoid possible errors in the estimation. For example, the
dose to each voxel in the calculated distribution depends on the dose calculation algorithm
used, on the calculation voxel spacing, and on the uncertainty in dose measurement in the
dataset used for ML training. In phantom, dose measurements can be planned by the MP
to test algorithms’ predictions.
MP shall also assess image quality through routine testing [119]. Recently, image
quality enhancers, based on DL, have been introduced in clinical practice in order to
ameliorate image quality. Consequently, image acquisition protocols could be updated
to achieve dose reduction, and the MP will be involved in the optimization to ensure the
minimum possible ionizing radiation dose to the patient [119,120].
It is also necessary to verify to what extent the imaging parameters’ change influ-
ences the quantitative image content and, consequently, the response of AI systems. To
this purpose, various physical phantoms have been developed. The Credence Cartridge
Radiomics (CCR) phantom for radiomics was created for CT [121] and CBCT [122] images.
More recently, anthropomorphic phantoms with heterogeneous objects were designed
in order to simulate the texture of lung nodules [123]. PET phantoms with 3D printed
inserts simulating heterogeneities in FDG uptake have been proposed [124], as well as MR
phantoms simulating relaxation times and texture of pelvic tissue and malignancies [125].
Using these kinds of phantoms, the sensitivity of radiomics-based ML classifications on
image acquisition parameters has been investigated. In CT, the classification is affected by
the device used [121], method of image reconstruction [126], noise reduction algorithms,
slice thicknesses [127,128]. PET features depend on acquisition mode [129,130], reconstruc-
tion algorithm, image resolution, and discretization [131,132]. MRI features are sensitive
to the field of view, field strength, pulse sequence, reconstruction algorithm, and slice
thickness [133].
Physical and digital phantoms could also be used to periodically verify the perfor-
mances of image-based ML algorithms. Digital phantoms are usually representative scans
of patients with known acquisition parameters. A dataset of CTs acquired twice on the
same patient 15 min apart allows “test-retest”, an assessment of the reproducibility of the
radiomics workflow under the same conditions [127].
The accuracy of AI-generated segmentation, image reconstruction, and synthetic
images (e.g., MRI) can be assessed using a ground truth digital phantom, for example of
brain glioma patients [133] and image simulators, capable of simulating MRI acquired with
different pulse sequence or field strength and reconstructed with different methods [133].
Specific tests allow assessing the accuracy of AI-based image registration [134].
In addition, MP can ensure correct extraction and quantitative analysis of imaging
data. Thus, before performing quantitative analysis with AI algorithms, the accuracy and
precision associated with the quantitative parameters within the images (e.g., tumors)
should be assessed [29]. Moreover, MP is responsible for the pre-processing of images
necessary for correct AI application. This would include the conversion of PET and
SPECT images in standard uptake value (SUV), the standardization of MR images intensity
scale [135], as well as assessment and correction of confounding factors of images, such
Appl. Sci. 2021, 11, 1691 8 of 17
as artifacts for metal implants in CT, magnetic field non-uniformity in MRI, and partial
volume effect (PVE) in nuclear medicine images. Multimodal images should be registered
using a proper method for rigid or deformable registration [136], a critical step that may
affect the accuracy of AI models analyzing hybrid image datasets voxel by voxel [137] in
order to combine metabolic, functional, and morphologic information.
In interventional radiology, MPs are involved in monitoring patients’ dose and manage
patients’ radiation risks by reviewing interventional procedures [138]. The involvement
of MPs will also reach safe implementation and QA of other AI systems, such as robotic
angiographs and/or neuro-navigators, robots, etc., and platforms (catheter navigation
assistants, analyzing relationships between catheter positions, therapeutic effect, and
patient outcomes, etc.) for interventional therapies.
In other fields of medical imaging where AI is rapidly emerging, such as pathology
imaging, MPs can support the acceptance and validation of AI systems. Recently, [139]
pathology Digital Imaging and Communications in Medicine (DICOM) file format has
standardized the representation, storage, and communication of pathology images acquired
with whole-slide scanners [139]. Common acquisition protocols could reduce the variability
in slide preparation and digitization procedures and scanner models among different
centers and improve the performance of AI detection systems.
quality controls that test the models in well-known situations can improve the interpretabil-
ity of models, as well as assessing architectures of DL models and their output using
activation and feature maps.
An initiative led by the US FDA, the Microarray Sequencing Quality Control MAQC/
SEQC [147], invites researchers to submit their models, features selected as important,
and performance estimates to a specific data analysis plan (DAP), which includes ML and
statistical crosscheck, before performing external validation data [100].
Validation, e.g., using the criteria in the TRIPOD statement [148], is required because
many of the available AI models are trained using small datasets, and although augmen-
tation and resampling methods are frequently applied, they are affected by overfitting
and poor generalizability and reproducibility [112]. Large and possibly multi-institutional
datasets, independent from the training datasets with realistic variability and the lowest
bias as possible, are needed for validation. These can be achieved by increasing the level
of collaboration among institutions [112], and the MP can play a role in checking the
compliance with the required standards.
5.4. AI in Radiotherapy
MPs contributed to making radiotherapy into a frontier of personalized precision
medicine by developing CT-based dose calculation, treatment planning, and image-guided
radiation therapy (IGRT) [90]. Other traditional domains of MPs in radiotherapy include
quality assurance and radiation protection [90]. MPs have been also at the forefront in
using AI in RT, leading to the implementation of knowledge-based treatment planning,
where ML algorithms are trained on the dataset, comprising patient images, contours,
clinical information, and treatment plans performed by experienced MPs to automatically
develop high-quality plans, allowing to accelerate radiotherapy plan design [46].
As with any other ML-based procedures, auto-planning systems also are as good as
their human-generated training data, and their outcome will need to be tested and finally
approved. Oftentimes, the proposed plan will need to be customized and modified by
clinical MPs because of the unique anatomy of every patient. More importantly, when
potential issues are identified for a specific plan, MPs communicate with other team
members, such as physicians, therapists, and dosimetrists, to reach a clinically acceptable
solution [149].
MPs are involved in validation and quality assurance of dose predicted by DL [90],
which can be tested by properly designed in-phantom film/ion chamber measurements
according to dosimetry protocols and benchmarking against previously established dose
calculation algorithms. Another critical aspect is also investigating how the uncertainties
of dose affect prognostic or predictive dosomic models [90].
Given their familiarity with imaging devices and LINACs derived from managing QA
programs, MP will have a critical role in the analysis of AI applied to the quality control of
LINACs. When an AI tool predicts a machine failure, MPs can help identify the cause of
the issue and corrective actions, such as calibrations [149].
ensuring that clinically used AI algorithms continue to perform with the desired level of
accuracy by conducting an appropriate routine QA test program with clearly established
frequency, metrics, tolerance levels, and actions to be performed in case of test failure [103].
The frequency and nature of the series of tests will be in need of frequent updates, given
the rapid pace of evolution of AI.
This is especially important for those AI systems that, being constantly learning and
updating, will be subject to change in terms of their response and accuracy [94,119]. At the
same time, it is critical to assess the effect of the decay of the relevance of the training data
due to changes in practices (e.g., changes in prescribed dose and dose per fractions) [94].
5.8. Research in AI
MPs are often active researchers and, having expertise also in statistics, mathematics,
and informatics, are suitable for research in AI. Extensive research is needed to understand
how to successfully introduce AI and define the use and characteristics of AI in clinical
practice [119].
Other active areas of research where MPs will be primarily involved include assessing
data veracity and validity, developing metrics for completeness, accuracy, correctness, and
consistency, and perform data cleaning activities [140]. Physicists should promote the inte-
gration of digital information from diagnostic and therapeutic procedures with genotyping
and phenotyping data into large data sets acquisition across all areas (clinical, dosimetric,
imaging, molecular, pathological, etc.), requiring multi-institutional and multinational
collaboration [24,90]. Examples of this are The Cancer Imaging Archive (TCIA) [156] and
the Platform for Imaging in Precision Medicine (PRISM) platform [157].
The specific task for MPs in AI research includes the definition of the problem to be
solved and determining its category (e.g., classification, regression, pattern recognition)
in the lexicon of AI, choosing proper models to be trained, determining a strategy for
collecting data from the appropriate dataset, and validating the model [103]. MPs also
need to investigate and report the possible pitfalls of the AI-based methods developed and
on how to overcome them. Besides, challenging is a personalizing therapy according to AI
output, e.g., dose painting in radiotherapy [90].
Privacy, security, secure access to health information, de-identification of sensitive
data, and obtaining informed consent, which are also of concern in research areas, become
more relevant in the era of big data. The MP involved in these research areas will be
required to apply the statements and recommendations released by governmental agencies,
scientists, healthcare providers, companies, and other interested parties and will have an
active role in formulating these statements [140].
Moreover, if MPs work at developing AI models or fine-tuning them on their data, they
have to carefully understand and address the limitations of the data used for training and of
the trained models [94]. Exploring multiple approaches, such as different feature selection
and ML methods and their combinations, can help in understanding these limitations.
The Findability, Accessibility, Interoperability, and Reusability (FAIR) principles are
intended to guide researchers into data management and reporting [158]. The methodology
of research studies should be detailed thoroughly, including also deep learning architectures
Appl. Sci. 2021, 11, 1691 11 of 17
and optimization parameters, and the datasets used to train models should be clearly
described in order to increase reproducibility and facilitate meta-analysis. Moreover,
decision, automation, and prediction models relying on AI must be tested in independent
and sufficiently large datasets to compare their validity against established methods,
including conventional biomarkers (e.g., clinical, radiological, etc.). The codes and data
used for training and testing the models should be made publicly available, e.g., by The
Cancer Image Archive. More guidelines for improving transparency and reproducibility of
models can be found in the TRIPOD [148].
6. Conclusions
AI can extend the expertise area of MPs, extracting even more information to improve
patient care, and the MP is ready to welcome the AI revolution. On the other hand, the MPs’
knowledge and skills will be required and beneficial for safe and optimal implementation
of AI, especially in radiological sciences, and their involvement in the multidisciplinary AI
team is crucial.
Author Contributions: Writing—Original Draft preparation: M.A., M.I.; Writing—Review & Editing:
M.A., A.T., F.B., C.T., M.S., M.I. All authors have read and agreed to the published version of
the manuscript.
Funding: This research was funded by the Associazione Italiana di Fisica Medica e Sanitaria (AIFM).
Institutional Review Board Statement: Not applicable.
Informed Consent Statement: Not applicable.
Data Availability Statement: Not applicable.
Conflicts of Interest: The authors declare no conflict of interest.
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