5 Sheri 2011 ACS BODIPY, Fluorescence PH Sensors
5 Sheri 2011 ACS BODIPY, Fluorescence PH Sensors
5 Sheri 2011 ACS BODIPY, Fluorescence PH Sensors
pubs.acs.org/IC
bS Supporting Information
ABSTRACT: A series of boron dipyrromethene (BODIPY)
dyes containing two aldehyde functional groups at the 3 and 5
positions have been synthesized in low-to-decent yields in two
steps. In the first step, the meso-aryl dipyrromethanes were
treated with POCl3 in N,N-dimethylformamide to afford 1,9-
diformylated dipyrromethanes. In the second step, the difor-
mylated dipyrromethanes were first in situ oxidized with 2,3-
dichloro-5,6-dicyano-1,4-benzoquinone and then reacted with
BF3 3 OEt2 to afford 3,5-diformylboron dipyrromethenes. The X-ray structural analysis indicated that the aldehyde groups are
involved in intramolecular hydrogen bonding with fluoride atoms, which may be responsible for the stability of the diformylated
BODIPY compounds. The presence of two formyl groups significantly alters the electronic properties, which is clearly evident in
downfield shifts in the 1H and 19F NMR spectra, bathochromic shifts in the absorption and fluorescence spectra, better quantum
yields, and increased lifetimes compared to 3,5-unsubstituted BODIPYs. Furthermore, 3,5-diformylboron dipyrromethenes are
highly electron-deficient and undergo facile reductions compared to unsubstituted BODIPYs. These compounds exhibit pH-
dependent on/off fluorescence and thus act as fluorescent pH sensors.
r 2011 American Chemical Society 4392 dx.doi.org/10.1021/ic102499h | Inorg. Chem. 2011, 50, 4392–4400
Inorganic Chemistry ARTICLE
’ RESULTS AND DISCUSSION triethylamine and BF3 3 OEt2 at room temperature for 10 min.
The synthesis of 3,5-diformylboron dipyrromethenes 912, Thin-layer chromatographic analysis showed a fluorescent yel-
starting from their corresponding unsubstituted dipyrro- low spot of the desired compound. The crude compounds were
methanes (DPMs) 14, is shown in Scheme 2. The required subjected to flash silica gel column chromatographic purification
dipyrromethanes 14 were prepared according to Lindsey’s and afforded pure 3,5-diformylboron dipyrromethenes 912 as
procedure11 by condensing the appropriate aldehyde with excess green solids in 726% yield. It is observed that BF3 3 OEt2 should
pyrrole in the presence of a catalytic amount of trifluoroacetic be added immediately after the addition of triethylamine, and any
acid at room temperature. The DPMs were purified by flash silica time delay between the addition of these two reagents to the
gel column chromatography and afforded pure compounds reaction mixture resulted in decomposition of the compound.
14 as white solids in 5676% yield. The 1,9-diformyl The molecular-ion peaks in high-resolution mass spectra con-
dipyrromethanes12 [DPM(CHO)2] 58 were prepared in the firmed the identity of compounds 912. 1H, 13C, 19F, and 11B
next step by treating DPMs 14 with the Vilsmeier reagent in NMR spectroscopies have been used to characterize compounds
1,2-dichloroethane at reflux temperature, followed by column 912 in detail. In 1H NMR, the absence of a signal at ∼7.94
chromatographic purification on silica, and afforded pure 1,9- ppm corresponding to 3,5 protons of BODIPY and the presence
diformyl dipyrromethanes 57 as white solids and 1,9-diformyl of a typical singlet at ∼10.5 ppm corresponding to an aldehyde
dipyrromethane 8 as a light-brown solid in 6782% yield. proton support that formylation occurred at the 3 and 5
Compounds 58 were characterized by various spectroscopic positions. The comparison of the 1H, 19F, and 11B NMR spectra
techniques, and the data for known compounds 57 are in of 3,5-diformylboron dipyrromethene 9 with 3,5-unsubstituted
agreement with those in the literature.12 A signal at ∼10.7 ppm in BODIPY13 13 is presented in Figure 1, and relevant NMR data of
1
H NMR and a molecular-ion peak in mass spectra confirmed the compounds 912 along with compound 13 are presented in
identity of 1,9-diformyl dipyrromethanes 58. The target 3,5- Table 1. As is clear from Figure 1 and the data in Table 1, the
diformylboron dipyrromethenes 912 were prepared in two presence of two electron-withdrawing formyl groups at the 3 and
steps in a one-pot reaction. In the first step, the appropriate 5 positions alters the π delocalization, which is reflected in the
diformyl dipyrromethanes 58 were oxidized in dichloro- downfield shifts in 1H, 19F, and 11B NMR. In 1H NMR, the
methane with DDQ for 30 min, followed by treatment with β-pyrrole protons Ha and Hb, which appear as two sets of signals at
6.55 and 6.90 ppm, respectively, in compound 13,13 experienced
downfield shifts and appeared at 7.11 and 7.19 ppm, respectively,
Scheme 1. Synthesis of the Reported BODIPYs in compound 9. Compounds 1012 also exhibited similar
downfield shifts of Ha and Hb, supporting alteration of the π
delocalization upon the introduction of two formyl groups at the
3 and 5 positions. In 11B NMR, compounds 912 showed a
typical triplet like compound 13. However, compounds 912
exhibited a 0.75 ppm downfield shift of the triplet and appeared
at 1.26 ppm, unlike compound 13, in which the triplet was
observed at ∼0.5 ppm in 11B NMR (Table 1). These kinds of
significant downfield shifts observed in 11B NMR were not very
common for BODIPYs.14 The downfield shifts observed in 1H
and 11B NMR spectra for compound 9 compared to compound
13 indicate that the strong electron-withdrawing formyl groups
make the BODIPY unit electron-deficient. The density func-
tional theory (DFT) studies discussed later also indicated that
the electron density is more toward formyl groups and the
Figure 1. Comparison of (a) 1H, (b) 11B, and (c) 19F NMR spectra of compounds 9 and 13 in selected regions recorded in CDCl3.
Table 1. 1H, 19F, and 11B NMR Data of Compounds 912 which the presence of internal hydrogen bonding between fluo-
along with 13 Recorded in CDCl3 ride ions and amido protons resulted in a 16 ppm downfield
1
shift of the signal in 19F NMR. Furthermore, the 1H NMR spectra
H NMR recorded for compound 9 in five deuterated solvents of varying
compound Ha Hb Hc 19
F NMR 11
B NMR polarity such as benzene, chloroform, acetone, acetonitrile, and
methanol clearly indicated that the aldehyde proton (Hc) is
13 6.55 6.90 145.4 0.50 shifted upfield by 0.6 ppm in methanol compared to benzene
9 7.11 7.19 10.478 130.8 1.26 (Figure S26 in the Supporting Information). Similar observa-
10 7.07 7.20 10.476 130.8 1.24 tions were made in 19F NMR spectra recorded for 9 in deuterated
11 7.14 7.21 10.474 130.7 1.28 chloroform and methanol (Figure S27 in the Supporting In-
12 6.84 7.18 10.480 130.5 1.24 formation). In chloroform, the quartet signal in the 19F NMR
spectrum was observed downfield (130 ppm) because of the
presence of hydrogen bonding, while in methanol, the hydrogen
BODIPY ring remains electron-deficient in compound 9. The bonding is absent, which is reflected in an upfield shift of the
most interesting observations were made in the 19F NMR spectra signal (140 ppm). This supports the fact that the polar solvent
of compounds 912. In all reported BODIPYs such as 13, the breaks hydrogen bonding, whereas hydrogen bonding is stabi-
19
F NMR spectrum corresponds to a single quartet because of lized in a nonpolar solvent. The 3,5-disubstituted BODIPYs16,17
coupling to 11B (I = 3/2 and J = 32 Hz) and resonances at are the first class of compounds where intramolecular hydrogen
approximately 147 ppm.13 bonding was established crystallographically. Because we in-
However, in some recently reported BODIPY compounds,15 ferred hydrogen bonding in compounds 912 from the 19F
the fluorines were found to be inequvalent and showed two sets and 1H NMR study, we attempted to grow single crystals of
of multiplets at ∼140 ppm. In complexes 912, we observed compounds 912. We successfully obtained single crystals for
only one quartet in 19F NMR, indicating that the fluorines are compound 11 by the slow evoporation of n-hexane/CHCl3 (1:1)
under a chemically equivalent environment. However, com- over a period of 1 week, which crystallized in a triclinic P1 unit
pounds 912 exhibited a 19F NMR signal at ∼131 ppm, cell. The crystal structure of compound 11 is shown in Figure 2.
a 15 ppm downfield shift compared to that of the other Compound 11 has a planar BODIPY framework, which is com-
reported BODIPYs.13 This unusual downfield shift was attrib- prised of two pyrrole rings and a central six-membered boron
uted to the presence of hydrogen bonding between fluoride ions ring like that reported in meso-(phenyl)boron dipyrromethene
and an aldehyde group. This observation is in line with the compound 14 (Table S1 in the Supporting Information). The
recently reported16 3,5-diamidoboron dipyrromethene dyes, in dihedral angle between the meso-aryl ring and the BODIPY core
4394 dx.doi.org/10.1021/ic102499h |Inorg. Chem. 2011, 50, 4392–4400
Inorganic Chemistry ARTICLE
Figure 4. Comparison of normalized (a) absorption and (b) emission spectra of compounds 9 (—) and 13 (---) recorded in chloroform.
Scheme 3. Schematic Representation of the Fluorescence steady-state fluorescence spectra were obtained with Perkin-Elmer
On/Off pH Sensor Lambda-35 and PC1 photon-counting spectrofluorometers manufac-
tured by ISS and USA Instruments, respectively. The fluorescence
quantum yields (Φf) were estimated from the emission and absorption
spectra by comparative method at the excitation wavelength of 488 nm
using Rhodamine 6G (Φf = 0.76)17a as standard. The time-resolved
fluorescence decay measurements were carried out at magic angle using
a picosecond diode-laser-based time-correlated single-photon-counting
fluorescence spectrometer from IBH, U.K. All of the decays were fitted
to a single exponential. The good fit criteria were low χ2 (1.0) and
random distributions of residuals. Cyclic voltammetric studies were
carried out with a BAS electrochemical system utilizing a three-electrode
configuration consisting of glassy carbon (working), platinum wire
(auxiliary), and saturated calomel (reference) electrodes. The experi-
ments were done in dry dichloromethane using 0.1 M tetrabutylammo-
nium perchlorate as the supporting electrolyte. Half-wave potentials
were measured using differential-pulse voltammetry and also calculated
manually by taking the average of the cathodic and anodic peak
potentials. The HRMS spectra were recorded with a Q-Tof micro mass
spectrometer. A single crystal of compound 11 (CCDC 768735) was
in basic and acidic pH media are quite different from each other. In obtained from the slow evaporation of a n-hexane/CHCl3 solution. The
a basic medium, the aldehyde proton Hc appeared at 9.9 ppm, intensity data collection for compound 11 has been carried out on a
which experienced a substantial upfield shift in an acidic medium Nonius MACH3 four-circle diffractometer at 293 K. The structure
and appeared at 5.8 ppm, supporting the existence of compound 9 solution for compound 11 was obtained using direct methods (SHELXS-
in two different states (Scheme 3). These changes are also clearly 97)23 and refined using full-matrix least-squares methods on F2 using
evident in the color of the solutions at different pH under a UV SHELXL- 97.24 For pH studies, the absorption and fluorescence
lamp. At acidic pH, the solution of 9 is bright fluorescent green, titrations were performed in an acetate buffer solution (0.1 M) contain-
which faded at basic pH (Figure S47b in the Supporting In- ing a minimum amount of methanol [1:99 (v/v) CH3OH/buffer] at a
formation). Thus, the pH-controlled fluorescence titration studies probe concentration of 5 μM. A few microliters of 0.1 and 0.01 M
indicate that 3,5-diformylboron dipyrromethenes can be used as solutions of HCl and/or NaOH were used to adjust the pH of the
pH fluorescent sensors. solutions.
Computational Details. The computational studies were per-
’ CONCLUSIONS formed with Gaussian 0319a installed on a Windows operating system.
The structures were energy-optimized using quantum mechanics with
We synthesized stable 3,5-diformylboron dipyrromethenes in DFT19b and B3LYP19c gradient-corrected correlation functional meth-
two steps starting from meso-aryl dipyrromethanes under simple ods in conjugation with a standard 6-31G (p,d) basis set19d and
reaction conditions. The X-ray structural analysis indicated that parameters. For the optimized structures, population analysis studies
the two aldehyde groups are involved in intramolecular hydrogen were done. The redox properties of compounds 9 and 13 and EA and IP
bonding with the fluoride atoms and stabilization of the com- data were also calculated.20,21 Simulations of the addition and removal of
pounds. The formyl groups on the BODIPY framework alter the electrons from BODIPY systems (compounds 9 and 13) were affected
electronic properties of the BODIPY unit siginificantly, which is by simply setting the charges and multiplicities as (1, 2) and (1, 2).
reflected in various spectroscopic and electrochemical properties. With these charges and multiplicities and the 3D coordinates of neutrally
The electrochemical studies as well as quantum-mechanical optimized BODIPY systems, geometry optimizations were carried out
studies at the DFT level indicated that the BODIPY unit in for the respective anions and cations. From the heats of formation
diformylboron dipyrromethenes is highly electron-deficient and obtained, the total energies (TEs) were calculated by zero-point and
readily undergoes facile reduction. The synthesized 3,5-difor- basis-set corrections. The EA and IP data were calculated using the
mylboron dipyrromethenes were used as fluorescent pH sensors, following formulas:
which is uncommon for aldehyde-containing fluorophores. Pre- EA ¼ TEðneutralÞ TEðanionÞ
sently, we are using these 3,5-diformylboron dipyrromethenes
to synthesize further eloborated structures such as 3,5-bis- IP ¼ TEðcationÞ TEðneutralÞ
(dipyrromethane)boron dipyrromethenes (Scheme S1 in the
Supporting Information) for various studies.
1,9-Diformyl-meso-(3,4,5-trimethoxyphenyl) Dipyrro-
’ EXPERIMENTAL SECTION methane. Dimethylformamide (5.1 mmol) was added to a 100 mL
three-neck, round-bottomed flask, cooled to 510 °C, and flushed with
General Experimental Details. The 1,9-diformyl dipyrro- nitrogen for 5 min. POCl3 (4.23 mmol) was added dropwise over 15 min
methanes12 57 and BODIPY13 13 were synthesized by following the with stirring. Dry dichloroethane (10 mL) was then added, and the
literature procedures. BF3 Et2O and 2,3-dichloro-5,6-dicyano-1,4-ben- mixture was stirred at room temperature for 15 min. The mixture was
zoquinone (DDQ) were used as obtained. All other chemicals used for cooled to 0 °C, meso-(3,4,5-trimethoxyphenyl)dipyrromethane (4; 4.23
the synthesis were reagent-grade unless otherwise specified. Column mmol) in dry dichloroethane (20 mL) was added dropwise over 1 h, and
chromatography was performed on silica (60120 mesh). The 1H, 13C, the solution turned to deep-purple. The solution was warmed to 50 °C
11
B, and 19F NMR spectra were recorded in CDCl3 using a Varian for 15 min and then allowed to cool to room temperature. A saturated
VXR 400 spectrometer operating at the appropriate frequencies using sodium carbonate solution (50 mL) was added, and the reaction was stir-
tetramethylsilnae [Si(CH3)4] as the internal reference. Absorption and red vigorously at room temperature for 2 h. The mixture was extracted
with ethyl acetate (3 100 mL), and the combined organic layers were 151.1, 153.1, 153.6, 184.3. HRMS. Calcd for C20H17BF2N2O5 [(M
dried over Na2SO4, filtered, and evaporated. The crude compound was F)þ]: m/z 395.1215. Found: m/z 395.1197. IR (KBr, νmax): 633.1,
subjected to silica gel column chromatography and eluted with petro- 765.0, 1074.2, 1175.1, 1232.2, 1269.7, 1335.8, 1379.5, 1464.9, 1539.2,
leum ether/ethyl acetate (70:30), which afforded pure 1,9-diformyl- 1570.3, 1675.4, 2922.7.
meso-(3,4,5-trimethoxyphenyl) dipyrromethane (8) as a light-brown
solid in 67% yield (0.8 g). Mp: 168169 °C. 1H NMR (400 MHz, ’ ASSOCIATED CONTENT
CDCl3, δ in ppm): 3.76 (s, 9H; OCH3), 5.45 (s, 1H; CH),
6.076.09 (m, 2H; py), 6.63 (s, 2H; Ar), 6.856.87 (m, 2H; py),
9.12 (s, 2H; NH), 10.86 (br s, 2H; CHO). HRMS. Calcd for
bS Supporting Information. Spectral data of all compounds,
fluorescence data, tables of crystal and absorption data, and X-ray
C20H20N2O5 [(M þ 1)þ]: m/z 369.1450. Found: m/z 369.1436. crystallographic data for compound 11 in CIF format. This material
General Procedure for 3,5-Diformylboron Dipyrro- is available free of charge via the Internet at http://pubs.acs.org.
methenes (912). 1,9-Diformyl dipyrromethanes 58 (1.7 mmol)
were dissolved in dichloromethane (200 mL) and oxidized with DDQ ’ AUTHOR INFORMATION
(2.04 mmol) at room temperature. The reaction mixture was allowed to
stir at room temperature for 30 min. Triethylamine (68 mmol), followed Corresponding Author
by BF3.Et2O (85 mmol), was added to the reaction mixture successively *E-mail: [email protected].
without any time delay, and stirring was continued at room temperature
for an additional 30 min. The reaction mixture was evaporated, and the
crude product was purified using silica gel column chromatography with ’ ACKNOWLEDGMENT
petroleum ether/ethyl acetate (75:25), which afforded pure 3,5-difor- M.R. acknowledges financial support by the DST and BRNS.
mylboron dipyrromethenes 912 as blue-greenish solids. M.R.R. thanks the CSIR for their research fellowship. We thank
3,5-Diformyl-8-tolyl-4-bora-3a,4a-diaza-s-indacene (9). the DST-funded National Single Crystal X-ray Diffraction Facil-
Yield: 80 mg, 14%. Mp: 242243 °C (dec). 1H NMR (400 MHz, ity for diffraction data. We thank the Department of Chemistry
CDCl3, δ in ppm): 2.52 (s, 3H; CH3), 7.12 (d, 3J(H,H) = 4.27 Hz, 2H; and Sophisticated Analytical Instrument Facility (SAIF), Indian
py), 7.20 (d, 3J(H,H) = 4.27 Hz, 2H; py), 7.43 (d, 3J(H,H) = 7.94 Hz,
Institute of Technology Bombay, for instrumentation. We also
2H; Ar), 7.53 (d, 3J(H,H) = 7.94 Hz, 2H; Ar), 10.48 (br s, 2H; CHO).
thank Dr. Evans Coutinho, Bombay College of Pharmacy for
11
B NMR (100 MHz, CDCl3, δ in ppm): 1.26 (t, 1J(BF), 1B). 19F
providing computational facility and valuable inputs.
NMR (300 MHz, CDCl3, δ in ppm): 130.8 (q, 1J(FB), 2F). 13C
NMR (100 MHz, CDCl3, δ in ppm): 21.8, 120.2, 129.9, 130.6, 131.4,
132.9, 137.9, 143.8, 151.0, 153.8, 184.4. HRMS. Calcd for C18H13- ’ REFERENCES
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