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DNA

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ADVANCE

GENETICS
01
• Molecular Structure
of DNA, RNA, and
Proteins •
Francis Crick and James Watson
- structure of DNA was first determined in
1950s.
- based on the X-ray crystallographic
data of Maurice Wilkins and Rosalind
Franklin.
- Using Franklin's X-ray crystallography
and their idea of the Chargaff's rule,
they were able to determine the double
helix structure of the DNA.
2 TYPES OF
NUCLEIC ACID
DNA
- is one type of nucleic acid made up of
nucleotides

Composed of:
 Deoxyribose (5-carbon sugar)
 Phosphate group
 Nitrogenous bases
2 TYPES of NITROGENOUS
BASES in DNA:

• Pyrimidines - are
single-ringed

• Purines - are double-


ringed
• Antiparallelism

- the strands are oriented in opposite


directions.
• Chargaff’s Rule
- the double-helix DNA strand is expected
to have the same purines and pyrimidine
ratios.
RNA
Composed of:
 Ribose (5-carbon sugar)
 Phosphate group
 Nitrogenous bases
5 Carbon Sugar
• Types of RNA

1 2 3
Messenger RNA Transter RNA Ribosomal RNA
(mRNA) (tRNA) (rRNA)
- carry protein information from - serves as a link (or adaptor) - ensures the proper
the DNA in a cell's nucleus to between the messenger RNA alignment of the mRNA and
the cell's cytoplasm, where the (mRNA) molecule and the the ribosomes during protein
protein-making machinery growing chain of amino acids synthesis and catalyzes the
reads the mRNA sequence and that make up a protein. formation of the peptide
translates each three-base bonds between two aligned
codon into its corresponding amino acids during protein
amino acid in a growing protein synthesis.
chain.
Comparison DNA RNA
Nitrogenous bases Adenine, Guanine. Adenine, Guanine, Uracil,
Thymine, Cytosine Cytosine
Base pairs Adenine  Thymine Adenine  Uracil
Guanine  Cytosine Guanine  Cytosine
Structure Double Helix Single-stranded
Function Contains the Convert the information
instructions needed for stored in DNA into
an organism to develop, proteins
survive and reproduce.

Length Longer Shorter


Sugar Deoxyribose Ribose
Location in the cell Nucleus, Mitochondria Cytoplasm
02
• DNA Replication,
Transcription, and
Translation RNA•
PROTEINS
DNA Replication
1. The two strand is separated by the enzyme Helicase and
results in the formation of the Replication Fork
2. Primase makes small pieces of RNA bases called a
Primer.
3. DNA Polymerase binds to the primer and will make
the new strand of DNA.
4. DNA Polymerase add DNA bases in one
direction from 5’ to 3’ end.
5. One of the new strand of DNA, the Leading
Strand, is made continuously.

6. The DNA Polymerase adding bases one by


one in the 5’ to 3’ direction.
7. The other strand, the Lagging Strand, runs in
opposite direction.
8. DNA make this strand in a series of small
chunks called Okazaki Fragment.
9. Each fragment start with an RNA Primer.
10. DNA polymerase adds a short row of DNA
bases in the 5’ to 3’ direction.

11. The process is repeated until a new DNA


has been made.
12. Exonuclease removes all the RNA Primers
from both strand of DNA.
13. DNA Polymerase fills in the gaps that are left
behind with DNA
14. DNA Ligase seals
up the fragments in
both strands to form
a continuous double
strand.
TRANSCRIPTION
& TRANSLATION
Transcription
Transcription
- DNA in the gene is used as a template to make messenger
RNA strand with the help of the enzyme RNA Polymerase.

3 Processes:
1. Initiation
•During initiation, the promoter region of the gene function
as a recognition site for RNA polymerase to bind.

• Binding makes the DNA double helix to unwind and open.


2. Elongation
• RNA Polymerase slides along the template DNA
strand.
• As complementary bases pair up, the RNA
polymerase links nucleotides to the 3’ end of the
growing RNA molecule.
3. Termination
• Once RNA polymerase reaches the termination
portion of the gene, the mRNA transcript is
complete and the RNA polymerase, the DNA
strand and the mRNA transcript disassociate from
each other.
mRNA Regions:
o Exons- code for protein.
o Introns – non-coding regions.

DNA Splicing:
- The introns are removed and a 5’ cap and 3’ poly A tail are
added.
• Spliceosome – enzyme that is used to make a mature
mRNA.
DNA Splicing
Translation
INITIATION
How is the information in the mature mRNA strand translated into
a protein?

The nitrogenous bases


are grouped into three
letter codes called
codons.
• The genetic code
includes 64 codons.
• Most codons code
for specific amino
acids.
4 Special Codons:

• AUG – start codon.


• UGA, UAA, UAG – stop codon.
Steps:
1. mRNA strand binds to the
small ribosomal subunit
upstream of the start codon.

 Each amino acid is brought to


the ribosome by a specific
transfer RNA (tRNA) molecule.
2. Complementary
base pairing occurs
between the codon
of the mRNA and
the anticodon of the
tRNA.
3. After the initiator tRNA molecule binds to the start codon, the large
ribosomal subunit binds to form the translation complex and initiation is
complete.
3 regions of the
Large Ribosomal
Subunit:

• E site
• P site
• A site
ELONGATION
4. Individual amino acids are brought to the mRNA strand by a transfer RNA
molecule through complementary base pairing of the codons and
anticodons.
5. A charged tRNA molecule binds to the A site and a peptide bond forms
between its amino acid and the one attached to the tRNA molecule at the P
site.
6. The complex slides down one codon to the right
where the now uncharged tRNA molecule exits from
the E site and the A site is open to accept the next
tRNA molecule.
TERMINATION
7. Elongation will
continue until a
stop codon will
reached.
8. A release factor binds to
the A site at a stop codon
and the polypeptide is
released from the tRNA in
the P site.

9. The entire complex


dissociates.

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