Phosphorus in Prebiotic Chemistry: Alan W. Schwartz
Phosphorus in Prebiotic Chemistry: Alan W. Schwartz
Phosphorus in Prebiotic Chemistry: Alan W. Schwartz
(a)
O
∆
n (NH4)2 HPO4 HO P O H + 2n NH3 + n–1 H2O
O
H n
(b)
O O O O
_ _ _ _ _ _ _
ROH + HO P _ O P OH RO P OH + HO P OH
O O O O
H H H H
Figure 1. (a) Balanced, idealized reaction equation for the production of condensed phosphates by the heating of ammonium
phosphate at elevated temperatures (greater than 1258C). In an actual experiment, of course, the reaction may not be complete.
(b) Reaction of an alcohol or nucleoside with pyrophosphoric acid (the simplest, but least reactive example of a condensed
phosphate) to produce a phosphate monoester with elimination of phosphoric acid.
might have been preceded in prebiological chemistry photolysis to N2 (Ferris & Nicodem 1974). For this
by inorganic polyphosphates: reason, the most reasonable scenario may be one
involving the recycling of ammonia. For example,
The inorganic polyphosphates which are found in a
ammonia is generated by hydrolysis of many potentially
great variety of organisms seem more attractive as
primary donors. Although now they give the
important prebiotic reactants such as nitriles and
impression of being metabolically fairly inert, they amides. Thus, it is not difficult to imagine it being
may represent an early means of energy distribution continually regenerated in solution, at least locally. The
which was abandoned later on. Their availability from photochemical and geochemical cycling of ammonia is
inorganic sources seems to be rather likely. a complex problem, involving a number of processes.
For a review and perspective on these questions, see
This observation provided a strong impetus for Summers (1999).
investigations into the properties of inorganic polypho- As is often the case in prebiotic scenarios, a volcanic
sphates and their utility in phosphorylation reactions. region would seem to be the sort of locale where
polyphosphates as well as phosphorylation reactions
could be driven by ammonium salts of phosphoric acid.
2. PHOSPHORYLATION REACTIONS While there is no shortage of models of prebiotic
WITH POLYPHOSPHATES OR phosphorylation in the literature, we need properly to
AMMONIUM PHOSPHATES deal first with the question of the source material on the
In synthetic organic chemistry, reactive and usually primitive Earth for all subsequent phosphorus chemi-
unsaturated ‘condensing agents’ are commonly stry. The phosphorylation methods summarized earlier
employed for phosphorylation reactions. A number of are all subject to the criticism that they do not utilize a
studies of possible ‘prebiotic’ phosphorylations have geologically plausible source of phosphate. In other
therefore utilized reactive compounds such as cyana- words, where did the phosphate come from in the first
mide and various related compounds (Steinman et al. place?
1964). Probably the most convincing models of
prebiotic phosphorylations, however, have made use
of inorganic polyphosphates or salts of phosphoric acid, 3. KNOWN SOURCES OF INORGANIC
which yield polyphosphates upon heating. A general PHOSPHATE
summary of this approach is shown in figure 1. A summary of the most important naturally occurring
Figure 1 summarizes the reactions involved in the phosphate minerals, both on the Earth and in
thermal phosphorylation of a nucleoside by heating in meteorites, is shown in table 1 (the most important
the presence of ammonium phosphate (Rabinowitz structural forms are shown; in actual fact, most
et al. 1968). The structure given as HO[PO3H]nH is occurrences involve a mixture of species).
the average composition of condensed phosphate of We are at once confronted by a problem in viewing
chain length n. At a moderate temperature such as this list. With the possible exception of meteoritic
1258C, the primary products are pyrophosphate and schreibersite (to be discussed later), all of the
tripolyphosphate. At elevated temperatures, long- compounds in table 1 are only slightly soluble in
chain polyphosphoric acid is formed. Solid-state water. While organisms can make use of the micromolar
phosphorylations such as these have been shown to concentrations of phosphate which occur in natural
be catalysed by urea (Lohrmann & Orgel 1971). Under waters, it is difficult to imagine how any useful synthetic
these conditions, the escape of gaseous ammonia as (prebiotic) chemistry could take place. Owing to the
well as water provides the driving force. Once formed, high natural abundance of calcium, evaporation of
polyphosphates are effective phosphorylating seawater does not lead to an increase in phosphate
agents, even in neutral aqueous solution (Schwartz & concentration, but to precipitation of one or another
Ponnamperuma 1968). There is some question as to form of apatite or francolite. Two possible exceptions to
the availability of ammonia on the primitive Earth, due this general behaviour should be noted. Firstly, if the
to its rapid photolytic conversion by ultraviolet early oceans were slightly less alkaline than today’s
O O O
HO P OH HO P OH H P OH
OH H H
oceans, perhaps due to a higher partial CO2 pressure, 4. LIGHTNING IN VOLCANIC ERUPTION CLOUDS
then the precipitation of the acid calcium salt brushite AND PHOSPHATE
(CaHPO4$2H2O) might have been possible (Gedulin & A phenomenon familiar to volcanologists is the
Arrhenius 1994). Secondly, under conditions of occurrence of lightning discharges in eruption clouds.
relatively high magnesium and ammonia concen- Gilbert & Lane (1994), for example, in a specialist
trations, an additional precipitate becomes possible report related to the topic of aviation safety, cite
(Handschuh & Orgel 1973), the mineral struvite multiple cases of lightning in volcanic clouds, which
(MgNH4PO4$6H2O). Both of these latter minerals were observed during eruptions at 11 different
can generate condensed phosphates upon heating. volcanoes, while Navarro-Gonzalez et al. (1996) list
We have to go back to Addison Gulick (1955) to an additional six documented examples and yet more
find the first explicit discussion of the problem of the can be found on the Internet. Two features of these
low solubility of phosphate minerals, as well as a events make them interesting from the point of view of
suggestion as to a possible solution. Gulick pointed prebiotic chemistry: (i) the presence of reduced gases in
out that the only significant source for phosphorus on volcanic eruptions and (ii) the presence of abundant
Earth was the slightly soluble mineral apatite. He dust in the clouds. It was pointed out by Russian
suggested that under the supposed ‘reducing con- workers in the 1970s that these conditions were
ditions’ described by Oparin (1938) as well as Urey suitable for prebiotic syntheses such as the Miller
(1952), phosphate would be reduced to a form such experiment and a number of kinds of organic
as phosphite or hypophosphite (figure 2), which are compounds, including amino acids, were identified
considerably more soluble in the presence of calcium (chiefly by paper and thin-layer chromatography) in
than phosphate. volcanic deposits (e.g. Markhinin & Podkletnov 1977).
This suggestion was considered by Miller & Urey Today, we would require more definitive molecular
(1959), who noted that all the lower oxidation states characterization of compounds of potentially biological
of phosphorus were unstable under the pressures of significance than were then applied, as well as evidence
hydrogen which these authors found to be probable that they were not introduced by contamination.
for the primitive Earth. Although they remarked that Nevertheless, conditions such as those described earlier
stronger reducing agents than hydrogen might have also raise the possibility of reduction of phosphate to
been present and that such a possibility was phosphite. In a simulation of the process, we have
deserving of further investigation, the possibility found that reduction is surprisingly effective, but
that reduction of phosphate could have occurred strongly dependent on the reducing nature of the gas-
under unusual conditions actually remained unad- mixture employed (figures 3 and 4).
dressed. Recent work has shown that such a process The interest of phosphite as a possible prebiotic
is indeed possible. This review will describe three phosphorus source is not only due to the higher solubility
scenarios by means of which phosphate could have of its calcium salt compared to apatite (approx. 1000
been made available for prebiotic chemistry. The first times higher),1 but also to its greater reactivity as a
is the possibility of phosphate reduction by a phosphorylating agent. It has been established that
combination of reducing and high-energy conditions. ammonium phosphite, for example, readily reacts with
The second is the discovery by Yamagata et al. that nucleosides to yield nucleoside-phosphites (nucleoside
P4O10 can be volatilized from magma and is, in fact, H-phosphonates) under conditions in which
being liberated from contemporary volcanoes. The ammonium phosphate is unreactive (figure 5).
third scenario is related to a recent demonstration We have shown that nucleoside H-phosphonates are
that the meteoritic phosphide mineral schreibersite is easily synthesized. Preliminary results also indicate that
surprisingly reactive. they are thermally condensed to form dimers linked by
Figure 3. Apparatus used to study the effect of electric discharge on mineral samples. Samples of apatite, mixed with a clay
mineral to provide improved adhesion, were deposited onto the ends of an open tungsten loop, which formed a gap of a few
millimetres. Pyrex caps (not shown) were fitted over the ends of the loop to prevent direct interaction of the sample with the
metal. The chamber was evacuated and back-filled with the gas mixture to be tested. A spark was induced between the ends of
the loop by exposing the apparatus to a microwave field. (Illustration from Glindemann et al. 1999; reproduced with kind
permission of Springer Science and Business Media.)
30
20
20
15 10
10
0 5 10 15 20 25
time (h)
5
Figure 5. Yield of uridine-5 0 -phosphite by reaction of uridine
with ammonium phosphite (1 : 2 molar ratio) at 608C. Solid
0 5 10 15 20
squares, four sets of reactions giving the yields in the absence
Figure 4. The conversion of apatite to phosphite by spark of urea; solid circles (upper series of data points), yields in the
discharge in a model atmosphere containing initially 60% presence of urea (uridine : ammonium phosphate : ureaZ
CO2 and 40% N2, but with increasing additions of H2 and 1 : 2 : 4). The initial time-lag observed for 5 h and less was
CO (the abscissa shows the sum of the contents of H2 probably due to the evaporation of water from the reaction.
and CO, which were present in equal concentrations). Data Under identical conditions as those shown here, ammonium
points (solid squares) are averages of three to five replicate phosphate produced no products (De Graaf & Schwartz
analyses and the vertical lines show the average deviation of 2005; reproduced with kind permission of Springer Science
the mean of each set of measurements (De Graaf & Schwartz and Business Media).
2000; reproduced with kind permission of Springer Science
and Business Media).
5. VOLATILIZATION OF P4O10 AND GENERATION
H-phosphonate diester bonds. While the monomers OF POLYPHOSPHATES IN VOLCANIC REGIONS
are resistant to oxidation, once incorporated into a Yamagata et al. (1991) reported the detection of
dimer, the linkage is easily oxidized to a phosphodie- condensed phosphates (primarily pyrophosphate and
ster. It is, therefore, conceivable that they might act as tripolyphosphate) in condensates from experiments in
intermediates in a pathway towards the formation of which apatite mixed with basalt had been subjected to
polynucleotides, as illustrated in figure 6. elevated temperature, thus indirectly confirming an
Phosphite, incidentally, also provides a possible link to earlier prediction that P4O10 would be volatilized from
the presence of phosphonic acids in carbonaceous apatite at high temperature (Griffith et al. 1977). More
chondrites. These compounds, which are the only striking was the identification of the same products in
phosphorus-containing organic compounds to be ident- condensates collected from a fumarole of the volcano
ified in meteorites, were reported by Cooper et al. (1992) Mount Usu. The concentrations reported for ortho-
in investigations of the Murchison meteorite (figure 7). phosphate, pyrophosphate and tripolyphosphate were
An interesting possibility concerning the mechanism 1.13, 0.45 and 0.37 mM, respectively. These concen-
of synthesis of these compounds in meteorites is that trations are very low and it is perhaps unlikely that they
they might derive from reactions of the PO3 radical could have contributed directly to chemical evolution.
di-anion and thus, ultimately, from a source such as More interesting is the question of the possible
phosphorous acid or phosphites. For example, recom- interaction of condensed phosphates with organic
bination of %PO3 with a methyl radical has been shown products on the surfaces (and perhaps even absorbed
to produce methyl phosphonic acid, the most abundant into the interior) of ash particles in eruption clouds. In
phosphorus-containing compound in Murchison. the course of the experiments on phosphite production
Similarly, a suite of other phosphonic acids has been mentioned earlier, we were also able to detect ortho-
synthesized via ultraviolet irradiation of phosphite in pyro- and tripolyphosphate, essentially confirming the
the presence of formaldehyde or simple alcohols results of Yamagata et al. In our experiments, up to 50%
(De Graaf et al. 1995). of the phosphate exposed to the electric discharge was
O O B O O B
O– O O O O
O PH O PH O P O–
O O B O O B O O B
HO OH O O O O
O O O
HO P OH HO P OH HO P OH
recovered in water extracts at the conclusion of the run, Table 2. Products obtained by reaction of Fe3P with water.
with roughly 10 and 2% of this total being in the form The reactions shown here were run in deionized water under
of pyro- and tripolyphosphate, respectively. argon as well as in the presence of air. Fe3P (1 g) was stirred in
25 ml H2O for 1 day at 208C (selected data from Pasek &
Lauretta 2005).
Yamagata, Y., Watanabe, H., Saitoh, M. & Namba, T. 1991 R. J. P. Williams (Inorganic Chemistry Laboratory,
Volcanic production of polyphosphates and its relevance to University of Oxford, UK ). I think it is not necessary
prebiotic chemistry. Nature 352, 516–519. (doi:10.1038/ to postulate reduced phosphorus compounds. The
352516a0) initial requirement of cells is to get energy in a useable
form. The probability is that the first step is to make a
vesicle with a gradient of protons associated with the
Discussion membrane. This gradient will drive element uptake or
J. F. Kasting (Department of Geosciences, Penn State rejection, explaining the observed gradients of ions and
University, PA, USA). I would just note that H2/CO rich molecules essential before chemistry could occur
atmospheres, which favour phosphite over phosphate, (uphill in energy) in the prebiotic cell. We know that
are considered to be plausible prebiotic atmospheres. the proton gradient can drive the catalysed formation of
H2 may have been high (about 0.1 bar) as a conse- pyrophosphate. Given pyrophosphate (ATP) all the
quence of slow escape of hydrogen to space (Tian et al. rest of some redox chemistry—condensation—can be
2005). CO could have been abundant (O0.1 bar) in the driven.
aftermath of large impacts (Kasting, Orig. of life, 1990). A. W. Schwartz. You may well be right and experiments
Thus, getting phosphate may have been relatively easy may eventually substantiate this very reasonable
to do on the prebiotic Earth. conjecture. But this is theory rather than fact and
D. W. Deamer (Department of Chemistry and Biochem- represents a considerable extrapolation from biochem-
istry, University of California, Santa Cruz, USA). istry (i.e. requiring an enzyme) to possible prebiotic
Question: Can you please comment on the roles of chemistry. Until we have a model system, which
pH and CO2 in releasing phosphate from apatite in actually demonstrates that this can be achieved with
soluble form? plausible (simple) ingredients, it seems prudent to
A. W. Schwartz. A pH lower than in the present ocean consider other possibilities.
(about 8) would tend to increase the solubility of
apatite. Calculations have shown that at a pH between
5 and 6 (in the range which could be produced by a Additional references
high CO2 concentration), there would be about an Schwartz, A. W. 1971 Phosphate: solubilization and acti-
vation on the primitive Earth. In Chemical evolution and
order of magnitude more phosphate in solution.
the origin of life (ed. R. Buvet & C. Ponnamperuma),
Although this is still a very low phosphate concen- pp. 100–108. Amsterdam, The Netherlands: North-
tration for solution chemistry, the presence of simple Holland.
organic acids, which chelate calcium, combined with Tian, F., Toon, O. B., Pavlov, A. A. & De Sterck, H. 2005
evaporation, could strongly enhance the effect A hydrogen-rich early Earth atmosphere. Science 308,
(Schwartz 1971). 1014–1017. (doi:10.1126/science.1106983)