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    Larone S Medically Important Fungi - 2018 - Walsh - Selected Websites

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    Yenia Micol Matwiejuk
    The document lists and provides links to various websites that contain information relevant to mycology. These websites include those maintained by universities and research institutions that contain fungal sequence data, identification resources, descriptions of medically important fungi, culture collections, and tutorials on molecular techniques such as PCR and Sanger sequencing. Several provide databases for nomenclature, taxonomy, and multilocus sequence typing of fungi.

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    Larone S Medically Important Fungi - 2018 - Walsh - Selected Websites

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    Yenia Micol Matwiejuk
    97 views3 pages
    The document lists and provides links to various websites that contain information relevant to mycology. These websites include those maintained by universities and research institutions that contain fungal sequence data, identification resources, descriptions of medically important fungi, culture collections, and tutorials on molecular techniques such as PCR and Sanger sequencing. Several provide databases for nomenclature, taxonomy, and multilocus sequence typing of fungi.

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    Larone s Medically Important Fungi - 2018 - Walsh - Selected Websites

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    The document lists and provides links to various websites that contain information relevant to mycology. These websites include those maintained by universities and research institutions that contain fungal sequence data, identification resources, descriptions of medically important fungi, culture collections, and tutorials on molecular techniques such as PCR and Sanger sequencing. Several provide databases for nomenclature, taxonomy, and multilocus sequence typing of fungi.

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    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Download as pdf or txt
    97 views3 pages

    Larone S Medically Important Fungi - 2018 - Walsh - Selected Websites

    Uploaded by

    Yenia Micol Matwiejuk
    The document lists and provides links to various websites that contain information relevant to mycology. These websites include those maintained by universities and research institutions that contain fungal sequence data, identification resources, descriptions of medically important fungi, culture collections, and tutorials on molecular techniques such as PCR and Sanger sequencing. Several provide databases for nomenclature, taxonomy, and multilocus sequence typing of fungi.

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Download as pdf or txt
    of 3

    Selected Websites

    Adelaide Mycology Online


    http://www.mycology.adelaide.edu.au/
    Maintained by David Ellis of the University of Adelaide in
    Australia. A wealth of information including, among other
    gems, a free download of the book Descriptions of Medical
    Fungi, 3rd ed. (Kidd et al., 2016).
    The Aspergillus Website
    http://www.aspergillus.org.uk/
    Everything you ever wanted to know about Aspergillus.
    Barcode of Life Data Systems (BOLD)
    http://www.boldsystems.org/views/login.php
    For collection, management, analysis, and use of DNA barcodes.
    CBS Fungal Biodiversity Centre
    https://www.gbif.org/publisher/6a430540-7f09-11d8-a1a0-
    b8a03c50a862
    Maintained by the Centraalbureau voor Schimmelcultures,
    Utrecht, The Netherlands; an excellent broad resource.
    DNA Data Bank of Japan
    http://www.ddbj.nig.ac.jp/intro-e.html
    The sole nucleotide sequence data bank in Asia.
    Doctor Fungus
    http://msgercdoctorfungus.com
    Website of the Mycoses Study Group. Loaded with information
    about the clinically encountered fungi, but not always up to
    date.

      495
    10.1128/9781555819880.oth2, Downloaded from https://onlinelibrary.wiley.com/doi/10.1128/9781555819880.oth2 by CochraneArgentina, Wiley Online Library on [30/03/2023]. See the Terms and Conditions (https://onlinelibrary.wiley.com/terms-and-conditions) on Wiley Online Library for rules of use; OA articles are governed by the applicable Creative Commons License
    EMBL Nucleotide Sequence Database (EMBL-Bank)
    https://www.ebi.ac.uk
    European nucleotide sequence resource.
    https://www.ebi.ac.uk/ena
    European Nucleotide Archive (ENA).
    Fusarium-ID
    http://www.westerdijkinstitute.nl/fusarium/
    Database for identification of Fusarium spp., including MLST database.
    Index Fungorum
    http://www.indexfungorum.org/names/names.asp
    International Commission on the Taxonomy of Fungi
    http://www.fungaltaxonomy.org
    ISHAM
    http://www.isham.org
    Website of the International Society for Human and Animal Mycology.
    Japan Society of Culture Collections (JSCC)
    http://www.nbrc.nite.go.jp/jscc/idb
    Database search. “JSMRS On-Line Database”
    http://www.nbrc.nite.go.jp/jscc/idb/snalpha?Org=Fungus
    Catalogue of cultures.
    Medical Mycology Research Center, Chiba University, Japan
    http://www.pf.chiba-u.jp/eng/
    Overview.
    http://www.pf.chiba-u.jp/english/gallery.html
    Photos and microphotographs of many fungi and a few aerobic actinomycetes.
    MLST website, Imperial College London, United Kingdom
    http://www.mlst.net/
    Multilocus sequence typing (MLST); data analysis, database, and more.
    Molecular Mycology Research Laboratory, University of Sydney, Australia
    http://www.mycologylab.org/DefaultInfo.aspx?Page=Home
    Database and resource center.
    MycoBank
    http://www.mycobank.org/
    Databases, nomenclature and species bank, online taxonomic novelties sub-
    mission, and more. Administered by the International Mycological Association.
    NCBI (Includes GenBank)
    http://www.ncbi.nlm.nih.gov
    Website of the National Center for Biotechnology Information. Provides access
    to extensive biomedical and genomic information.
    PHYLIP (Phylogeny Inference Package)
    http://evolution.genetics.washington.edu/phylip/software.html
    Programs available for phylogenic analysis.
    496 Selected Websites
    10.1128/9781555819880.oth2, Downloaded from https://onlinelibrary.wiley.com/doi/10.1128/9781555819880.oth2 by CochraneArgentina, Wiley Online Library on [30/03/2023]. See the Terms and Conditions (https://onlinelibrary.wiley.com/terms-and-conditions) on Wiley Online Library for rules of use; OA articles are governed by the applicable Creative Commons License
    Species Fungorum
    http://www.speciesfungorum.org/names/names.asp
    For nomenclature and taxonomy.
    Westerdijk Fungal Biodiversity Institute
    http://www.westerdijkinstitute.nl/

    TUTORIALS
    Cycle Sequencing: Dolan DNA Learning Center, Cold Spring Harbor
    Laboratory
    http://www.dnalc.org/view/15923-Cycle-sequencing.html
    Sanger sequencing; animated presentation with written explanation.
    High-Throughput Sequencing
    http://www.sumanasinc.com/webcontent/animations/content/highthroughput2.html
    Pyrosequencing, high-throughput using microbeads; animated and narrated.
    The Polymerase Chain Reaction (PCR) (Sumanas Inc.)
    http://www.sumanasinc.com/webcontent/animations/content/pcr.html
    Animated and narrated explanation of PCR.
    Principle of Pyrosequencing Technology (Qiagen)
    https://www.qiagen.com/us/resources/technologies/pyrosequencing-resource-
    center/technology-overview/
    The Sanger Method (Sarah Obenrader)
    http://www.bio.davidson.edu/Courses/Molbio/MolStudents/spring2003/
    Obenrader/sanger_method_page.htm
    Illustrated description of the basic and modified method of Sanger sequencing.

    Selected Websites 497

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