User Manual WheatCAP 09292022
User Manual WheatCAP 09292022
User Manual WheatCAP 09292022
1.3. Equipment
Our wheat breeding program adopted DJI platforms (SZ DJI Technology Co., Ltd.,
Shenzhen, China) equipped with RGB (DJI Phantom 4 RTK) and multispectral sensors (DJI
Phantom 4 Multispectral) in 2018-2021 (Bhandari et al., 2020; Bhandari et al., 2021). DJI
Phantom 4 and Mavic 2 Pro series equipped with RGB cameras and DJI Matrice 100 with a
SlantRange 3P multispectral camera (SlantRange, San Diego, CA, USA) were used for RGB and
multispectral imagery data collection.
In terms of multispectral sensors, radiometric calibration is an important component to
convert pixel values in raw images to spectral reflectance to see accurate crop traits such as
vegetation indices. Traditionally, radiometric calibration is conducted through the relationship
between actual reflectance values and pixel values in images of various reflectance panels
(Sapkota et al., 2020). Recently, multispectral cameras for UAV provide two different ways of
radiometric calibration: 1) using the images including a reflectance panel taken before and after
flights (Chang et al., 2021), and 2) using upward-light sensor recording illumination condition
(Change et al., 2020).
During the last four years of our work on UAS-HTP development, we found the following
basic equipment features for smooth and efficient UAS data collection: 1) a stable and uniform
UAS with the autonomous mode is needed to collect high-quality UAS data over a cropping
season consistently, 2) UAS that can measure light conditions such as the Ambient Illumination
Sensor (AIS) on SlantRange sensors or has calibrated reflectance panel (CRP) that comes with
MicaSense RedEdge sensors (AgEagle Aerial Systems Inc., Seattle, WA, USA) can be used for
radiometric calibration of multispectral images and avoid the need to add calibration panels in
the field during data collection.
For those programs that can purchase DJI platforms, below are some of the
recommendations with respect to UAS platforms and associated sensors (costs listed here might
be different currently):
Option #1 (1 multi-spectral platform)
1. DJI Phantom 4 RTK Multispectral (6 bands) with Ground Station: $9,100
2. Reach RS2 base/rover: $6,000 (rover and base is around $5,000 but you will need survey
rods for each, so it will be around $6,000 for everything)
3. Reflectance Tarps (optional): $1,200
Option #2 (1 multi-spectral platform)
1. DJI Matrice M200 V2: $6,000
2. SlantRange 4P+ (6 bands): $6,000 or MicaSense RedEdge MX (5 bands): $6,300
3. Reach RS2 base/rover: $6,000 (rover and base is around $5,000 but you will need survey
rods for each, so it will be around $6,000 for everything)
4. Reflectance Tarps (optional): $1,200
Option #3 (1 RGB and 1 multi-spectral platform)
1. DJI Phantom 4 RTK with Ground Station: $8,500
2. DJI Phantom 4 RTK Multispectral (6 bands): $6,500
3. Reach RS2 base/rover: $6,000 (rover and base is around $5,000 but you will need survey
rods for each, so it will be around $6,000 for everything)
4. Reflectance Tarps (optional): $1,200
Option #4
1. DJI Matrice 300 RTK: ~ $10,000
2. DJI ZenMuse P1 (45MP full frame RGB): $6,800
3. Reach RS2 base/rover: $6,000 (rover and base is around $5,000 but you will need survey
rods for each, so it will be around $6,000 for everything)
4. DJI Phantom 4 Multispectral: $6,500 or you should be able to use SlantRange 4P+ with
M300 as well.
Users can use DJI GO 4/DJI GS Pro/Pix4D capture apps (or CrystalSky for the latest
platforms) to plan flight missions and control the drones for aerial mapping for DJI Phantom and
Mavic series with an RGB camera. The software supports most DJI platforms and flight
parameters depending on the UAS models and camera specifications. DJI Matric 100 with
SlantRange 3P camera can be operated by DroneDeploy with an additional plug-in to set up
flight conditions for the multi-spectral camera. Based on the previous experience and research on
UAS data collection for breeding programs, we came up with flight specifications on image
overlap, flight altitude, and flight pattern to design UAS missions. For example, the RGB
platform was flown at 20-30m altitude with 80~85% forward and side overlap to obtain sub-
centimeter (0.5-1 cm/pixel) Ground Sampling Distance (GSD) orthomosaics (Bhandari et al.,
2021; Yeom et al., 2018). As the multi-spectral camera has a narrower field of view (FOV), a
multi-spectral platform was flown over the study area at a higher altitude (>50m) with lower
overlap (70~75%) than the RGB platform. 1.2–1.7 cm/pixel GSD orthomosaic images were
obtained from DJI Matric 100 with SlantRange 3P camera when flown at 30–35 m with a 70–
75% overlap (Bhandari et al., 2021; Yeom et al., 2018).
2. Utilizing UAS data portal/hub for data handling
A UAS data hub/portal was created specifically for the Wheat CAP project in the Oracle
cloud system. Below is the link to access the Wheat CAP UASHub (Figure 2).
https://wheatcap.uashubs.com/
Users can access the hub by submitting an email address and password. The hub is equipped
with data sharing, visualization, and analysis features. A project for each individual breeding
program will be created.
Hover the mouse on Manage data > Upload Raw UAS Data > Select a project, a platform, a
sensor, a date, and a flight (if not included, please click on the "Add Flight" button (Figure 3)).
To add a flight, fill out the input fields and click on the "Add" button > Click on the 'Upload'
button and select the file to upload (Figure 4).
Notes:
- Flight name is YYYYMMDD
- Use only numbers when filling out flight altitude, overlap, and name.
- Upload only ONE .zip file at the time. Once uploading has been
completed, change flight details as needed and upload the next .zip file.