Scribd
Upload
33 views30 pages

Ex Bio

The document contains data on the abundance of different taxa (labeled AA-CW) across 7 samples (labeled 1-7). It includes measures of diversity (Shannon index, Simpson index, etc.) calculated for each sample. Measures of beta diversity (Whittaker index) between the samples are also provided.

Uploaded by

Emiliano García
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as XLSX, PDF, TXT or read online on Scribd
33 views30 pages

Ex Bio

The document contains data on the abundance of different taxa (labeled AA-CW) across 7 samples (labeled 1-7). It includes measures of diversity (Shannon index, Simpson index, etc.) calculated for each sample. Measures of beta diversity (Whittaker index) between the samples are also provided.

Uploaded by

Emiliano García
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as XLSX, PDF, TXT or read online on Scribd
You are on page 1/ 30

Spxa AA AB AC AD AF AG

1 1 1 1 1 1 1
2 1 0 1 1 0 0
3 1 0 1 1 0 0
4 1 0 0 1 0 0
5 1 0 0 0 0 0
6 0 0 0 0 0 0
7 0 0 0 0 0 0
AH AI AJ AK AL CA CB
1 1 1 1 1 1 1
0 0 0 1 1 1 0
0 0 0 1 1 1 0
0 0 0 0 1 1 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
CC AM AN AO AP AQ CD
1 0 0 0 0 0 0
0 1 1 1 1 1 1
0 1 0 0 0 0 0
0 1 0 0 0 0 0
0 1 0 0 0 0 0
0 1 0 0 0 0 0
0 1 0 0 0 0 0
CE CF CG AR AS CH CI
0 0 0 0 0 0 0
1 1 1 0 0 0 0
0 0 0 1 1 1 1
0 0 0 0 0 0 0
0 0 0 0 1 0 0
0 0 0 0 1 0 0
0 0 0 0 0 0 0
CJ AT AU AV AW AX AY
0 0 0 0 0 0 0
0 0 0 0 0 0 0
1 0 0 0 0 0 0
0 1 1 1 1 1 1
0 1 1 1 1 1 1
0 1 0 1 1 1 1
0 1 0 1 1 1 0
AZ CK CL CM CN CO CP
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
1 1 1 1 0 0 0
1 0 0 1 1 1 1
1 0 0 0 0 0 0
1 0 0 0 0 0 0
CQ CR CS BA BB BC BD
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
0 0 0 0 0 0 0
1 1 1 0 0 0 0
0 0 0 1 1 1 1
BE CT CU CV CW
0 0 0 0 0
0 0 0 0 0
0 0 0 0 0
0 0 0 0 0
0 0 0 0 0
0 0 0 0 0
1 1 1 1 1
JACCARD similitud
1 2 3 4 5
1 0.26 0.30 0.16 0.04
1 0.35 0.20 0.07
1 0.23 0.13
1 0.53
1

WHITAKKER
1 2 3 4 5
0 0.6 0.68 0.83 1
0 0.29 0.55 0.89
0 0.43 0.76
0 0.18
0

13.213534
6 7
0 0
0.04 0.03
0.10 0.04
0.37 0.25
0.47 0.26
1 0.30
1

6 7
1 1
0.88 0.9
0.75 0.89
0.24 0.5
0.06 0.4
0 0.37
0
Sector x espe 1 2 3 4 5 6
AA 28 37 19 29 0 0
AB 34 0 0 0 0 0
AC 45 29 0 0 0 0
AD 48 17 21 0 0 0
AF 33 0 0 0 0 0
AG 25 0 0 0 0 0
AH 19 0 0 0 0 0
AI 28 0 0 0 0 0
AJ 33 0 0 0 0 0
AK 34 0 0 0 0 0
AL 41 29 27 23 0 0
AM 0 27 19 29 31 29
AN 0 28 0 0 0 0
AO 0 24 0 0 0 0
AP 0 26 22 28 0 0
AQ 0 27 23 27 0 0
AR 0 0 24 0 0 0
AS 0 0 25 19 17 31
AT 0 0 0 17 18 33
AU 0 0 0 21 11 0
AV 0 0 0 29 19 28
AW 0 0 0 11 18 29
AX 0 0 0 29 13 33
AY 0 0 0 28 14 24
AZ 0 0 0 23 12 35
BA 0 0 0 0 0 0
BB 0 0 0 0 0 0
BC 0 0 0 0 0 0
BD 0 0 0 0 0 0
BE 0 0 0 0 0 0

11 9 8 13 9 8
12.2666667 8.13333333 6 10.4333333 5.1 8.06666667
7
0
0 I II III
0 I 1 0.26 0.30
0 II 1 0.35
0 III 1
0 IV
0 V
0 VI
0 VII
0
0
21
0
0
0
0
0
0
26
0
24
23
22
0
20
21
24
26
27
24

11
8.6
IV V VI VII
0.16 0.04 0.00 0.00
0.20 0.07 0.04 0.03
0.23 0.13 0.10 0.04
1 0.53 0.37 0.25
1 0.47 0.26
1 0.30
1
1 2 3 4 5
Taxa_S 11 9 8 13 9
Individuals 368 244 180 313 153
Dominance_D 0.09393 0.1111 0.1218 0.07801 0.1176
Simpson_1-D 0.9061 0.8889 0.8782 0.922 0.8824
Shannon_H (diversidad alfa 2.381 2.197 2.092 2.555 2.174
Equitatibilidad ^H/S 0.9833 0.9994 1.013 0.9901 0.9766
Brillouin 2.298 2.101 1.982 2.444 2.034
Menhinick 0.5734 0.5762 0.5963 0.7348 0.7276
Margalef 1.693 1.455 1.348 2.088 1.59
Equitability_J 0.993 0.9997 1.006 0.9961 0.9892
Fisher_alpha 2.133 1.838 1.716 2.738 2.09
Berger-Parker 0.1304 0.1516 0.15 0.09265 0.2026
Chao-1 11 9 8 13 9
iChao-1 11 9 8 13 9
ACE 11 9 8 13 9
6 7 betadiversity whitakker diversidad beta
8 11 1 2
242 258 1 0 0.6
0.1228 0.08817 2 0.6 0
0.8772 0.9118 3 0.7 0.3
2.088 2.413 2.27142857 4 0.8 0.5
1.009 1.015 5 1 0.9
2.002 2.301 6 1 0.9
0.5143 0.6848 7 1 0.9
1.275 1.801
1.004 1.006
1.59 2.333
0.1446 0.1047 alfa promedio 2.27142857
8 11
8 11
8 11
versidad beta
3 4 5 6 7
0.7 0.8 1 1 1
0.3 0.5 0.9 0.9 0.9
0 0.4 0.8 0.8 0.9
0.4 0 0.2 0.2 0.5
0.8 0.2 0 0.1 0.4
0.8 0.2 0.1 0 0.4
0.9 0.5 0.4 0.4 0
Simpson Permite medir la riqueza de
index organismos.

medida del número de


especies cuando cada una es
ponderada por su abundancia
relativa, a medida que
aumenta el número de
especies, las más raras se
Diversidad de Hill vuelven menos importantes.
Jaccard
Whitakker
Utilizado para la obtener la muestra de la
probabilidad de que dos individuos
sacados al azar de una muestra
correspondan a la misma especie.
AA
1 2 3 4 5
MM BB 5 2 4 5 0
BC 1 6 4 10 0
CC 1 1 0 3 0
MN BB 11 3 3 2 0
BC 2 9 8 4 0
CC 2 3 3 1 0
NN BB 6 2 3 2 0
BC 1 2 5 3 0
CC 1 2 0 0 0
total 30 30 30 30 0
AL
1 2 3 4 5
MM BB 7 1 2 2 0
BC 1 7 7 14 0
CC 1 1 1 1 0
MN BB 11 2 1 0 0
BC 3 13 10 5 0
CC 0 1 1 0 0
NN BB 6 1 2 0 0
BC 1 2 5 6 0
CC 0 2 1 2 0
total 30 30 30 30 0
AM
1 2 3 4 5
MM BB 0 2 0 12 14
BC 0 4 1 3 3
CC 0 2 0 3 3
MN BB 0 3 5 4 2
BC 0 10 18 2 2
CC 0 2 2 1 1
NN BB 0 2 2 3 3
BC 0 5 2 1 1
CC 0 0 0 1 1
total 0 30 30 30 30
AT
1 2 3 4 5
MM BB 0 0 0 10 10
BC 0 0 0 1 1
CC 0 0 0 6 8
MN BB 0 0 0 3 5
BC 0 0 0 1 0
CC 0 0 0 4 4
NN BB 0 0 0 2 1
BC 0 0 0 1 0
CC 0 0 0 2 1
total 0 0 0 30 30
AX
1 2 3 4 5
MM BB 0 0 0 6 4
BC 0 0 0 7 4
CC 0 0 0 0 2
MN BB 0 0 0 5 6
BC 0 0 0 6 5
CC 0 0 0 1 2
NN BB 0 0 0 2 3
BC 0 0 0 2 2
CC 0 0 0 1 2
total 0 0 0 30 30
6 7
0 0 16
0 0
0 0
0 0
0 0
0 0
0 0
0 0
0 0
0 0 120

6 7
0 0
0 0
0 0
0 0
0 0
0 0
0 0
0 0
0 0
0 0 120

6 7
18 15
2 1
1 1
1 5
0 1
0 1
5 2
2 2
1 2
30 30 180

6 7
4 4
7 4
3 2
1 4
4 7
1 2
4 2
4 3
2 2
30 30 120

6 7
2 1
2 2
7 5
0 0
0 0
1 2
3 2
4 3
11 14
30 29 119
n.total ind 675
7 15 3 5 5 5 5

Sample Genotipo MM MN NN
1 BB
2 BB
3 BB
4 BB
5 BB
6 BC
7 BC
8 BC
9 BC
10 BC
11 CC
12 CC
13 CC
14 CC
15 CC
5 5 5

You might also like