Mendelian Inheritance
Mendelian Inheritance
Mendelian Inheritance
Perform animal cell culture using the basic principles of aseptic techniques (P3, PLO2)
Synopsis
• This course aims to introduce the important
concepts of genetics and fundamental
principle in genetics.
• This course provide understanding of human
chromosome, Mendelian inheritance and
disease, effect of genes of the phenotypes
which determine the human trait, genetic
susceptibility and genetic of cancer
Course learning outcomes
• Upon completion of this course students
should be able to:
Human Genetics
Nor Isnida Ismail
• What genetic principles account for the passing of
traits from parents to offspring?
• The blending hypothesis
• Genetic material from the two parents blend
together
Fig. 14-1
BE @
I i
'
÷
Fig. 14-2a
TECHNIQUE
€
Experiment with garden peas
True breading (produce
1 offspring of the same variety
when they self-pollinate)
Parental
generation
(P) Stamens
Carpel
3
4
Monohybrid
homozygous Rr heterozygous
Crosses RR /
-
-
rr
By
¥ physical
88
00
0 0
Dihybrid Crosses
8
Mendel discovery/ concept
“heritable factor” > gene
alternative versions of genes : variations
1st
in inherited characters > allele
¥
law of segregation: 2 alleles for heritable
character separates/ segregates during
4th
gamete formation & end up in different
gametes
Fig. 14-4
Lochs =
colour
Adele
purple/ white /
'
: .
"
Homologous
Locus for flower-color gene pair of
chromosomes
of organisms.
• Three methods to predict outcomes
– The Punnett Square Method
– The Forked-Line Method
– The Probability Method
The Punnett Square Method
Dd Ggww ✗ DdGgWw
The Forked-Line Method
Dd ✗ Dd G- 9×0-9 for an Intercross
Wwxww
DD AG
C-
Dd 9
Dd Eg
dd 59
0
⇒
Probability
• The probability of an event is the frequency of that event in
-
the sample space.
£-8
• For a coin toss:
– The probability of heads is 1/2.
– The probability of tails is 1/2.
• For two heterozygotes (Gg) producing an offspring:
- a.gas
– The probability of GG is 1/4.
– The probability of Gg is 1/2.
– The probability of gg is 1/4.
Fig. 14-UN1
Pp ✗
Pp
J
PpYyRr X ☐
Ppyyrr
pppppppp
-
Probability
• The sample space is the
collection of all events.
c-
• What is the probability
two events, A and B, will
occur together?
• What is the probability
that at least one of the
two events, A or B, will
occur at all?
The Multiplicative Rule
5=-0
• If the events A and B are independent, the
probability that they will occur together, denoted
P(A and B), is P(A) P(B).
→
• If the events A and B are independent, the
probability that at least one of them occurs,
denoted P(A or B), is given by☐P(A) + P(B) − [P(A)
P(B)].
PLA ) 1- PBC ) -
[ pc A) xp (B)]
• Example: Probability of a drawing an ace OR a heart,
P(A or H)
P(A) = 4/52 P(H) = 1/4
P(A or H) = (4/52) + (1/4) − (4/52 1/4) = 16/52
The Additive Rule
53
• If the two events do not overlap in the sample space,
-
8⇔
• Obstacles to Human Genetic Analysis
– Incomplete family records
– Small number of progeny
– Uncontrolled environment
E-
• Pedigrees are
diagrams that show
the relationships
among the members
of a family.
Inheritance of a Dominant Trait
• Every individual who carries the
EÉ
dominant allele manifests the
trait.
✓
Key Points
• Pedigrees are used to identify dominant and
-
=
recessive traits in human families.
⇒
recessive
– When a gene has more than two alleles
– When a gene produces multiple phenotypes
Mendel’s Work
• Each trait that Mendel studied was controlled
by a single gene with two alleles.
• Genes may have more than 2 alleles.
• Different alleles may affect the phenotype in
different ways.
Allelic Variation
and Gene Function
The diverse kinds of alleles of genes
affect phenotypes in different ways.
""" "" "" " "
"
"
" " "°
expressed 17 is not completely expressed in fi generation
Incomplete Dominance
• The phenotype of the
heterozygote is
O
midway between the
-
phenotypes of the
⇒
two homozygotes.
• One allele is partially,
or incompletely,
0 dominant over the
other.
cuh
Codominance : : : :*
alleles are acting
.
• The heterozygote
expresses the
phenotypes ofC) both
(
homozygotes.s
• Neither allele is
dominant.
For any character, dominance/recessiveness
relationships of alleles depend on the level at
which we examine the phenotype
¥
• Tay-Sachs disease is fatal; a dysfunctional enzyme
causes an accumulation of lipids in the brain
– At the organismal level, the allele is recessive
– At the biochemical level, the phenotype (i.e., the
=
-
=
• All other alleles are
mutants.
Fig. 14-11
Allele Carbohydrate
IA A
IB B
i none
(a) The three alleles for the ABO blood groups
and their associated carbohydrates
-
IAIA or IA i A
IBIB or IB i B
IAIB AB
ii O
(b) Blood group genotypes and phenotypes
Allelic Series
• An allelic series describes
÷
the dominance hierarchy
of multiple alleles.
• A null allele is
nonfunctional.
• A hypomorphic allele has
partial function..
Testing Mutations for Allelism
alle / dominant dominant -
BB
ey
-
Homozygous ≤
recessive Bb
recessive
=
Heterozygous - = bb
C )
[ 3
* Variation Among the
=
Effects of Mutations
• Visible mutations
By
• Sterile mutations
• Lethal mutations
Genes Function to Produce
Polypeptides
Dominant and Recessive Mutations
o
☐ o
=
-
-
o
-
=
Key Points
Genes often have-
• O multiple alleles.
① @ ③
• J
Mutant alleles may be dominant, recessive, incompletely
dominant, or codominant.④
umping Hit
• If a hybrid that 0
-
inherited a recessive mutation from each of its
parents has a mutant phenotype, then the recessive
=
mutations are alleles of the same gene; if the hybrid has a
wild phenotype, then the recessive mutations are alleles of
_
different genes.
Key Points
• Most genes encode polypeptides.
DD / 99 ""
environment.
==
• Examples
– Drosophila shibire mutation (temperature)
-
– Phenylketonuria (diet)
– Pattern baldness (gender)
BbCc BbCc
Sperm
1/ 1/ 1/ 1/
4 BC 4 bC 4 Bc 4 bc
Eggs
1/
4 BC
BBCC BbCC BBCc BbCc
1/
4 bC
BbCC bbCC BbCc bbCc
1/
4 Bc
BBCc BbCc BBcc Bbcc
1/
4 bc
BbCc bbCc Bbcc bbcc
9 : 3 : 4
Pleiotropy
• Mutations in the
phenylketonuria gene cause
mental impairment, light hair
color, and the presence of
metabolites in blood and urine.
AaBbCc AaBbCc
Sperm
1/ 1/ 1/ 1/ 1/ 1/ 1/ 1/
8 8 8 8 8 8 8 8
1/
8
1/
8
1/
8
1/
8
Eggs
1/
8
1/
8
1/
8
1/
8
Phenotypes: 1/
64
6/
64
15/
64
20/
64
15/
64
6/
64
1/
64
Number of
dark-skin alleles: 0 1 2 3 4 5 6
Key Points
• Gene action is affected by biological and physical
factors in the environment.
• Two or more genes may influence a trait.
• A gene is pleiotropic if it influences many different
phenotypes.
Consanguinous Matings and Recessive
Traits
Inbreeding
Inbreeding increases the frequency of homozygotes and
decreases the frequency of heterozygotes.
The Chromosome Theory of
Heredity
Studies on the inheritance of a sex-linked trait
in Drosophila provided the first evidence that
the meiotic behavior of chromosomes is the
basis for Mendel’s Principles of Segregation
and Independent Assortment.
→
¥¥
✗ wt
1
✗✗ wtw ✗ wty
-
Nondisjunction as Proof of the
Chromosome Theory of Heredity
The Principle of Segregation
The Principle of Independent Assortment
Sex-Linked Genes in
Human Beings
X- and Y-linked genes have been
studied in humans.
An X-Linked Recessive Disorder:
Hemophilia
*
Calculating the Risk of Inheriting an X-Linked
÷
Disorder: Colorblindness
The Y Chromosome
Pseudo autosomal
E-
centromere
chromosome
• Few Y-linked traits
• Pseudoautosomal
genes are on both the
X and Y chromosomes
Sex Chromosomes and
Sex Determination
In some organisms, chromosomes—
in particular, the sex chromosomes—
⇒
determine male and female
phenotypes.
Sex Determination in Human Beings:
The Presence the Y Chromosome
TDF : testis -
determining
factor
The SRY gene and the
Testis-Determining Factor (TDF)
Testicular Feminization
◦
-
Key Points
• In humans sex is determined by a dominant effect of the SRY
% =
gene on the Y chromosome; the product of this gene, the
testis-determining factor (TDF), causes a human embryo to
develop as a male.
• In Drosophila, sex is determined by the ratio of X
chromosomes to sets of autosomes (X:A).
• In honeybees, sex is determined by the number of
chromosome sets; haploid embryos develop into males and
diploid embryos develop into females.
Mechanisms of Dosage Compensation
⇒
• Hyperactivation of X-linked genes in males
(Drosophila)
• Inactivation of one copy of X-linked genes in
females (mammals)
• Downregulation of X-linked genes in females
(Caenorhabditis elegans)
X Inactivation
The Barr Body
X inactivation in Female Mammals
• In mammalian females
– One of the two X chromosomes in each cell is
randomly@ inactivated duringC-
embryonic)
development
• If a female is heterozygous for a particular gene -
Active X
O
Key Points
• In mammals, dosage compensation for X-
linked genes is achieved by inactivating one of
the two X chromosomes in females.
Linked Genes Do Not
Assort Independently
Figure 5.1
5-6
These haploid cells contain a
combination of alleles NOT
found in the original
chromosomes
This new combination of
These are alleles is a result of
termed genetic recombination
parental or These are termed
non- nonparental or recombinant
recombinant cells
cells
Figure 5.1
5-7
Crossing Over
Multiple
Crossovers
Chromosome 9 in Maize
Evidence that Crossing Over Causes
Recombination
Key Points
• Linkage between genes is detected as a deviation
from expectations based on Mendel’s Principle of
Independent Assortment.
Estimation of
relative distances Agriculture
between linked improvement-
genes-crossing specific strain &
over breeding
Fig. 15-11
RESULTS
Recombination
frequencies
9% 9.5%
Chromosome
17%
b cn vg
Mapping the Distance Between
Genes Using Recombination Data-
Alfred Sturtevant
Experimentally, the percentage of recombinant offspring is
correlated with the distance between the two genes
– If the genes are far apart → many recombinant offspring
– If the genes are close → very few recombinant offspring
• Map distance =
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EXAMPLE
• Genetic mapping accomplished by carrying out a testcross
– A mating between an individual that is heterozygous for two or more
genes and one that is homozygous recessive for the same genes
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Chromosomes are
the product of a
crossover during
meiosis in the
heterozygous parent
Recombinant
offspring are fewer
in number than
nonrecombinant
offspring
Figure 5.9
5-47
• The data at the bottom of Figure 5.9 can be used to estimate the distance between the two
genes
• Map distance =
76 + 75
= X 100
542 + 537 + 76 + 75
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The Data-recombinant frequencies to make
linkage map of fruit fly genes
Alleles Number Percent
Concerne Recombinant/ Recombinant
d Total Number Offspring
y and w/w- 214/21,736 1.0
e
y and v 1,464/4,551 32.2
y and r 115/324 35.5
y and m 260/693 37.5
w/w-e and 471/1,584 29.7
v
w/w-e and 2,062/6,116 33.7
r
w/w-e and 406/898 45.2
m
v and r 17/573 3.0
v and m 109/405 26.9
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5-53
◼ A close look at Sturtevant’s data reveals two points
that do not agree very well with his genetic map
◼ The y and m dihybrid cross yielded 37.5% recombinants
◼ But the map distance is 57.6
◼ So what’s up?
◼ As the percentage of recombinant offspring approaches a
value of 50% :-
◼ The likelihood of multiple crossovers increases
recombinant offspring
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5-58
The frequency of recombination
measures the intensity of linkage. In
the absence of linkage, this frequency
is 50 percent; for very tight linkage, it is
close to zero.
Unusual forms of inheritance
1. Maternal effect and epigenetic inheritance
• Involve genes in the nucleus
2. Extranuclear inheritance
• Involves genes in organelles other than the nucleus
– Mitochondria
– Chloroplasts
3. Imprinting
4.
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7-3
1. MATERNAL EFFECT
• Maternal effect refers to an inheritance pattern for
certain nuclear genes in which the genotype of
the mother directly determines the phenotype of
her offspring
• Surprisingly, the genotypes of the father and
offspring themselves do not affect the phenotype of
the offspring
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7-4
Example
• 1920s by A. E. Boycott on water snail,
Limnaea peregra
– the shell and internal organs can be arranged in one
of two directions
• Right-handed (dextral)
• Left-handed (sinistral)
• The dextral orientation is more common and dominant
Reciprocal cross
Figure 7.1
7-6
◼ Alfred Sturtevant later explained the incongruity with Mendelian
inheritance
◼ Snail coiling is due to a maternal effect gene that exists as dextral
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2. Mitochondria
• maternally inherited transmission occurs when the defective
gene is encoded in the mitochondrial genome
• MERFF: mitochondrial myoclonus epilepsy with ragged red
fibers
• Kearns-Sayre syndrome
• MELAS:mitochondrial myopathy/encephalopahty /lactic-
acidosis/stroke like episodes
• Mutations in mitochondrially encoded tRNA molecule
3. Genomic Imprinting
◼ Genomic imprinting is a phenomenon in which
expression of a gene depends on whether it is
inherited from the male or the female parent
Copyright ©The McGraw-Hill Companies, Inc. Permission required for reproduction or display
7-40
Copyright ©The McGraw-Hill Companies, Inc. Permission required for reproduction or display
7-41
Both male and female
mice express the Igf2
in their somatic cells
Figure 7.10
7-43
◼ Thus genomic imprinting is permanent in the somatic
cells of an animal
◼ However, the marking of alleles can be altered from
generation to generation
◼ Genomic imprinting occurs in several species
including mammals, insects and plants
◼ It may involve
◼ A single gene
◼ A part of a chromosome
◼ An entire chromosome
◼ Even all the chromosomes from one parent
◼ It can be used for X inactivation in some species
Copyright ©The McGraw-Hill Companies, Inc. Permission required for reproduction or display
7-44
Imprinting
• Inheritance of a trait occurs only from one parent.
• The particular gene is only expressed from either maternally or paternally
inherited allele.
• The chosen parental allele is constant from one person to the next for all of
the few, known imprinted genes.
• A process that alters the state of a gene without altering its nucloetide
sequence; often associate with methylation of specific nucleotides . The
altered state is established in the germ line and is transmitted to the
offspring where it may persists through offspring’s life.
• Prader-Willi & Angelman syndrome are well known examples of diseases that
result from oppositely imprinted genes in the same region of chromosome
15.
• DNA methylation involves the addition of a methyl group to
the 5 position of the cytosine pyrimidine ring or the number 6
nitrogen of the adenine purine ring (cytosine and adenine are
two of the four bases of DNA).
• alters the gene expression pattern in cells such that cells can
"remember where they have been" or decrease gene
expression