Agilent 1100 Series HPLC w/ DAD & FLD Detector (non-buffer solvents)

Updated May 30, 2008 Instrument instructions can be found at: http://academic.bowdoin.edu/chemistry/resources/instructions.shtml If you have any problems with the instrument or would like to get trained, please contact Celeste Moody (725-3756 / [email protected] / Druckenmiller 256)

1. Protocol
a. Read instructions carefully before using instrument. Reading the bold sentences in each category will tell you what you need to know to run the instrument. i. Bullets are under the bold sentences when more detail is required. ii. At the end of the instructions is a frequently asked questions/troubleshooting section.

2. Startup Procedure
a. Program should be in Method and Run Control view for the following steps. i. Go to View > Method and Run Control. b. Turn on computer and login (use your Bowdoin account). i. Wait until CAG Bootp Server is running before proceeding to next step. c. Turn on instrument modules (start with DAD detector). d. Open Instrument 1 Online. e. Add FLD module. i. A Configuration window will pop up. ii. On Available Modules side, scroll down until you find FLD G1321A detector. It should be the only module that is green on that side. iii. Select the module (left click once on the module). iv. Click the Add -> button. Module will now be on the Configured Modules side. v. Click OK. f. Check solvent and waste bottles. g. Prepare samples. h. Enter sample information into HPLC log sheet. i. Turn on detectors. i. Instrument > More DAD > Control. 1. In the Lamps section, select On for Vis and UV. 2. Click OK. ii. Instrument > More FLD > Control 1. In the Lamp section, select On. 2. Click OK. iii. Detector lamps should warm up for twenty minutes before analyzing samples.

3. Create/Edit Method
a. Program should be in Method and Run Control view for the following steps. i. Go to View > Method and Run Control. 1

b. Load method (File > Load > Method). c. Edit entire method (Method > Edit Entire Method) Check all four boxes. i. FLD Signals 1. Signals a. Enter the Ex and Em wavelength you would like to collect a chromatogram for. 2. Time a. Time at which the FLD stops an analysis. Set this to no Limit so it will stop when the pump stops. This will not turn off the detector. 3. Multiple Wavelengths and Spectra a. If you would like to collect at different wavelengths, or collect spectra, click on the Full >> button. b. Select Multi Ex or Multi Em. c. Select what signals (B-D) and enter wavelength. Each one of these signals you select will give you a chromatogram. d. Under Acquire Spectra, you can choose to scan a range of wavelengths. Use this if you would like to collect spectra for the peaks in your chromatogram. i. Select All and enter a range. d. Save method (File > Save As > Method). e. Flush system with solvent(s) used in method.

4. Create/Edit Sequence
a. Program should be in Method and Run Control view for the following steps. i. Go to View > Method and Run Control. b. c. d. e. f. icon, located in the top left corner. Select Sequence Task Load sequence (Sequence > Load Sequence). Edit Sequence Table (Sequence > Sequence Table). Edit Sequence Parameters (Sequence > Sequence Parameters). Save sequence (Sequence > Save Sequence As).

5. Start Sequence
a. Program should be in Method and Run Control view for the following steps. i. Go to View > Method and Run Control. b. Configure monitor analysis window. c. Verify system is stable. d. Run sequence (Run Control > Run Sequence).

6. Integrate
a. Program should be in Data Analysis view for the following steps. i. Go to View > Data Analysis. b. Select Integration Task icon . c. Integrate spectrum (Integration > Auto Integrate). 2

7. Generate Spectra
a. Program should be in Data Analysis view for the following steps. i. Go to View > Data Analysis. b. Select Spectral Task icon . c. Select peak to obtain spectrum. d. Print (File > Print > All Windows).

8. Generate Report
a. Program should be in Data Analysis view for the following steps. i. Go to View > Data Analysis. b. Select report destination and style (Report > Specify Report). c. Print report (File > Print > Report).

9. Shutdown Procedure
a. Program should be in Method and Run Control view for the following steps. i. Go to View > Method and Run Control. b. Flush system with appropriate solvent DO NOT leave water in the system. c. Turn off pumps and detector (Instrument > System Off). d. Return Configured Modules back to original settings. i. Open Configuration window (Instrument > Configure 1100 Access). ii. In the Configured Modules side, select FLD G1321A. iii. Select module. iv. Click Remove button. v. Click OK. e. Close ChemStation and CAG Bootp Server. f. Turn the computer and instrument modules off. g. Remove your samples from autosampler tray.

HPLC 1100 Frequently Asked Questions

1. How do I run the FLD as a standalone unit?
a. Remove the standard flow cell and install the standalone cell. i. Unscrew the two front screws. ii. Remove the standard flow cell, leave all tubing connected. iii. Install the standalone cell and tighten the two screws. iv. Connect the waste tubing to the port that says Out. b. Turn on the computer and login (use your Bowdoin account). i. Wait until CAG Bootp Server is running before proceeding to next step. c. Turn on all the modules (starting with the DAD detector). d. Open Instrument 1 Online. e. Enter sample information into HPLC log sheet. f. Program should be in Method and Run Control View for the following steps. i. Go to View > Method and Run Control. g. Turn on detector (Instrument > More FLD > Control). i. Allow twenty minutes for lamp to warm up. h. Adjust FLD parameters. i. Instrument > Set Up FLD Signals. ii. Click Full>> button (if it is not already selected). iii. Click Special Setpoints button. iv. In the Fluorescence Scan Range box, enter the excitation and emission scan range. i. Load sample into plastic syringe. The needle has a flat edge with a plastic ferrule. j. Insert needle into port that says In. The plastic ferrule should be all the way up to cell port. k. Slowly inject sample until you see your sample flowing into the waste tubing. l. Keep syringe in the port while running your sample. m. Run sample (Instrument > More FLD > Take Fluorescence Scan). n. Program should be in Data Analysis view for the following steps. i. Go to View > Data Analysis. o. Load signal (File > Load Signal). p. View isoabsorbance plot (Spectra > Isoabsorbance Plot). i. Click Exit button when finished. q. View 3D Plot (Spectra > 3D Plot). i. Click Close button when finished. r. Remove syringe and flush out cell with methanol. s. Flush air through the cell to remove any solvent. t. Remove standalone cell and replace with standard flow cell. u. Turn off modules and log off computer.

2. How do I print the FLD chromatogram and spectra?

a. Program should be in Data Analysis view for the following steps. i. Go to View > Data Analysis. b. Load Signals (File > Load Signal). 4

c. In the Load Signal window, make sure Load Using Signal Details is not checked. This will load all signals collected. d. To print FLD chromatogram and spectra, load only the FLD signal(s). i. Load Signal (File > Load Signal). ii. Select Load Using Signal Details box. iii. Click Signal Details button. iv. Add FLD signal(s) to Signal Description. Delete all other signals. v. Click OK (Signal Details window). vi. Click OK (Load Signal window). e. Specify report (Report > Specify Report). f. In report style, select fld. g. Click OK. h. Print preview (File > Print Preview > Report). i. If report is okay, print (File > Print > Report).