As Biology: Unit 2 Notes (Edexcel)
As Biology: Unit 2 Notes (Edexcel)
Nucleus No No Yes
Membrane-bound No No Yes
organelles
Eukaryotic cells:
➔ found in Eukaryotes; Animals, plants, protoctists (i.e; Algae), many fungi
➔ Contain membrane-bounded organelles; A nucleus, Mitochondria, chloroplasts etc…
Prokaryotic cells:
➔ Found in Prokaryotes; most bacteria, green-blue algae
➔ Do not contain membrane-bounded organelles (no mitochondria, ER, golgi body and
chloroplasts)
➔ do not have a nucleus. They have a single strand of DNA coiled to form a loop in the
centre- the nucleoid
➔ Cytoplasm contains enzymes, ribosomes and food storage granules
➔ will sometimes have additional genetic material in rings called plasmids
➔ Respiration takes place in a special part of the cell membrane; a Mesosome
➔ Photosynthesizing prokaryotes will have a form of chlorophyll. *Not in chloroplasts
Membranes
The cell membrane surrounds a cell acting as a boundary which holds the cell together and
controls what goes in and out. *Partially permeable
Intracellular membranes make up/surround organelles and serve many functions.
The protoplasm
Cytoplasm
jelly-like liquid containing organelles
The nucleus
● Largest organelle, between 10 and 20 micrometres
● Controls events in cytoplasm because contains genetic material of cell; Nucleic acids
(DNA and RNA). Also contains proteins. *when cell is not dividing DNA bonds with a
protein to form chromatin- tiny granules
● surrounded by a double nuclear membrane or, envelope, which has many nuclear pores
allowing for the movement of chemicals
● Contains at least one nucleolus; dense area of almost pure nucleic acids and proteins
Mitochondria
● Surrounded by inner and outer membranes. Inner membrane folded to make cristae
which is surrounded by a fluid matrix
● contain their own genetic material; to replicate themselves during cell division
● Function: Releases energy from food in the form of ATP using Oxygen in a series of
biochemical reactions → aerobic respiration
● More found in cells requiring more energy, i.e; muscle cells
Centrioles
● Two found in each cell. Each a bundle of nine tubules.
● Function: Pull apart to form a spindle of microtubules in mitosis
Cytoskeleton
Dynamic, 3D, web-like structure made of microfilaments (protein fibres) and microtubules
(protein tubes)
Function: gives cytoplasm structure and keeps organelles in place
vacuoles
Mostly found in plant cells. Formed and lost as needed in some animal cells. i.e; white blood
cells
Golgi body
● Made up of stacks of flattened, parallel, membrane pockets called cisternae, found near
the nucleus. Transfer vesicles from the sER fuse to form these
● Function: Modify, store and transport proteins received at the cis golgi from the rER.
Carbohydrates can be added to proteins to form glycoproteins.
● Secretory vesicles containing proteins bud off the cisternae at the trans golgi
● some fuse with the outer cell membrane to release proteins, i.e; extracellular enzymes
● Involved in formation + secretion of lysosome
Lysosome
Vesicles containing a powerful mix of digestive enzymes. Used in phagocytosis.
Can rupture to destroy damaged cell- known as apoptosis.
The organisation of cells:
1. Tissues: Groups of similar cells carrying out a specific function- They do not operate on
their own
Four main tissue types:
➔ Epithelial: form the lining of surfaces, inside and outside the body. i.e; squamous
epithelium
➔ Connective: Main supporting tissue in the body mostly made up of collagen. i.e; bone
tissue, blood
➔ Muscle tissue
➔ Nervous tissue
2. organs: Different tissues, grouped into a structure so that they can work effectively
together
3. Organ systems: Organs working together as a system to carry out large-scale
functions
Stage 1:
Interphase;
➔ G1: cell synthesizes mRNA and proteins
➔ S (Synthesis): DNA replication and cell growth + centrosomes replicate
➔ G2 (gap 2): final cell growth takes place. *At checkpoints, small proteins called cyclins
build up and attach to CDKs to allow the cell to move on to the next stage
Mitosis:
A form of cell division which results in two identical daughter cells being formed.
*Allows for growth, asexual reproduction in some organisms and for damaged tissue to be
replenished after injury by replacing damaged cells.
Prophase:
❖ Chromosomes coil and condense by winding around positively charged histone proteins
and each appear as two chromatids joined by a centromere. (X shape)
❖ Nucleolus breaks down
❖ Centrioles move apart and begin to form the spindle
Metaphase:
❖ Nuclear membrane breaks down
❖ Spindles made of microtubules have been formed (by the centrioles) and chromosomes
line up at the equator of the cell where each is attached to a spindle fibre by its
centromere
Anaphase:
❖ The centromeres separate as the sister chromatids are pulled towards opposite poles,
shortening spindle tubules
Telophase:
❖ Spindle fibres break down and nuclear membranes form around two sets of
chromosomes
❖ Nucleoli and centrioles also re-form. The chromosomes unravel, becoming less dense
Gametogenesis: (meiosis)
Meiosis is a process where a single cell divides twice to produce four cells (sex cells or
gametes) containing the haploid number of chromosomes.
-It consists of two stages;
➔ Meiosis l
◆ Same process as mitosis; two diploid cells produced
◆ Crossing over occurs during prophase (during synapsis); homologous
chromosomes1 wind around each other at the chiasmata and sections of each
chromosome switch places; genetic information is shared between the two →
genetic variation even between siblings
◆ independent assortment occurs as a result of the alignment of homologs during
metaphase I, determining which maternal and paternal chromosomes assort to
each daughter cell. Each pair of alleles separates independently of every other
pair of unlinked alleles leading to a new combination of chromosomes.
➔ Meiosis ll
◆ Same process as mitosis (prophase, metaphase, anaphase, telophase) but DNA
is not replicated
◆ Only one of the four cells produced becomes an ovum; the others are polar
bodies
1
Carry the same genes but not necessarily the same alleles
Structural adaptations of mammalian gametes:
Sperm
Spermatogenesis (in testes) → spermatids → differentiate into mature sperm within about two
months. *occurs from onset of puberty throughout a man’s lifetime.
Secondary oocyte
Animals
1. Sperm move through the female
reproductive tract and the
acrosome region matures
2. Sperm cluster around ovum
(secondary oocyte)
3. Heads of sperms touch surface of
ovum → acrosome reaction2
4. One sperm3 eventually wriggles
through the weakened barriers and
touches the surface membrane of
the secondary oocyte
5. The oocyte undergoes second
meiotic division to provide a
haploid egg nucleus
6. A tough fertilisation membrane is formed to prevent polyspermy following the cortical
reaction
7. The head of the sperm enters the oocyte and the tail is left behind; the male and female
chromosomes fuse and a diploid4 zygote is produced
Plants
1. If the molecules on the surface of the pollen grain and the stigma recognise each other
as being from a different plant5 from the same species the pollen grain begins to grow or
germinate
2. Pollen tube grows through stigma into the hollow style
3. Nucleus of pollen tube divides to form two male nuclei and the tip of the tube eventually
passes through the micropyle of the ovule *growth of pollen tube is very fast due to rapid
elongation of cell
4. Two male nuclei pass into the ovule
5. Double fertilisation occurs → one male nucleus fuses with the nuclei of the two polar
bodies to form the triploid endosperm nucleus and the other fuses with the egg cell to
form the diploid zygote
2
Enzymes are released from the acrosome which digest the follicle cells and the zona pellucida as the
sperm approach the egg
3
One sperm alone does not produce sufficient enzymes to penetrate the protective layers around the
ovum; reason for large number of sperm released in ejaculation
4
Containing two complete sets of chromosomes one from each parent
5
For more variation
Stem cells
Stem cells are undifferentiated cells (Totipotent, Pluripotent or multipotent) which have the
potential to differentiate and give rise to different specialised cells such as muscle cells.
These cells are present in some organs where they will divide to replace and replenish
damaged tissue.
•The main two types of stem cells are embryonic cells, which are derived from the
blactocyst (a ball of cells which developes 3-5 days after fertilisation) produced under
IVF or fetal tissue, and adult stem cells which are taken from adult tissues such as the
bone marrow.
•Due to their unique regenerative abilities (They are capable of continuous cell division
and technically have no hayflick limit), stem cells can be used to treat several
diseases including type 1 diabetes- where they can be induced to become insulin
producing beta cells.
Genetic variation
❖ Alleles are alternative forms of the same gene that occupy the same location
(gene locus)
A phenotype is the result of an interaction between genotype and the environment (e.g.
animal hair colour, human height, monoamine oxidase A (MAOA) and cancers). For example,
about 400 genes contribute to human height, however, environmental factors which determine a
child’s nutrition and overall health also affect it. The data on the relative contributions of genes
and environment is often difficult to interpret.
Gene locus
A locus (plural loci), in genetics, is the specific location or position of a gene, DNA
sequence, on a chromosome.
When there are large numbers of genes involved, it becomes hard to distinguish the effect of
each individual gene
Topic 4: Biodiversity and natural resources
All living organisms are divided into three domains (established by Woese in 1990); bacteria,
Archaea, Eukarya which stem from the last universal common ancestor (LUCA).
*Bacteria and Archaea, are both single-celled prokaryotic microorganisms with no nucleus.
Despite this, Archaea are known to be more closely related to Eukarya.
feature Bacteria Archaea Eukarya
Nucleus No No Yes
Membrane-bound No No Yes
organelles
6
I.e; DNA, RNA and proteins
The theory that there are three domains; two prokaryotes (Archea and bacteria)
and the eukaryotes developed as a result of analysis of ribosomes, enzymes and
chemicals such as DNA and RNA under molecular phylogeny. The three domain
system, remains a source of debate and uncertainty, however, as some scientists argue
that archaea are not more closely linked to eukarya and that the evolution of organisms
would be better represented by a complex web of life rather than a simple tree.
Because plant cells are bounded by cell walls, they appear as more rigid and uniform in shape
than animal cells. *Plant cells contain the same features as animal cells (except centrioles) as
well as some distinguishing features
middle lamella
Holds cell walls of neighbouring plant cells together, acting as a glue. Made mainly of calcium
pectate and hemicelluloses which hold the cellulose matrices in place.
Plasmodesmata
a narrow thread of cytoplasm7 that passes through the cell walls of adjacent plant cells and
allows communication between them.
Pits
Pits are cavities in plant cell walls that allow water to be transported more easily.
Chloroplasts
➔ large organelles, biconvex shape
➔ Contain granum made of thylakoid membranes suspended in a liquid called stroma
➔ contain their own DNA and have a double membrane 8, like mitochondria, giving a large
SA for reactions to take place
➔ function: site of photosynthesis; contains chlorophyll- green pigment that traps energy
from light
Amyloplasts
colourless, like chloroplasts, develop from a plant stem cell known as a leucoplast.
function: store amylopectin. Found in large amounts in starch-storing areas; potato tubers
Cellulose:
● Cellulose is made up of long chains of beta
glucose joined by 1,4- glycosidic
bonds-cellulose chains9.
○ One of the monomer units has to be
inverted so bonding can take place.
Hydroxyl groups stick out on both sides
of the molecule → cross-linking can
occur between parallel chains. These
hydrogen bonds make cellulose and
plant fibres very strong.
7
The cytoplasm is not completely separated at cell division
8
Inner membrane is folded
9
10-100,000 cellulose molecules (straight chains) joined by hydrogen bonds make up microfibrils.
○ They have a high tensile strength meaning they cannot be easily broken by
pulling.
❖ Epidermis: outer layer of the stem is the epidermis, protects the cells beneath it. A waxy
substance called cutin is secreted to reduce water loss
❖ Parenchyma: Made up of parenchyma cells- unspecialised cells. Can serve many
functions, i.e; storage and photosynthesis, some can be modified into collenchyma and
sclerenchyma
❖ Sclerenchyma: Type of modified parenchyma- for support. Develop around vascular
bundles in older stems, to support bigger upper weight of plant. Sclerenchyma cells have
strong secondary walls made of cellulose microfibrils laid out perpendicularly to each
other. Some form fibers; very long cells found in bundles/cylinders. Lignin is deposited
on the cell walls of fibres. Position: outside phloem
❖ Vascular bundle:
Xylem:
Main functional units; hollow, lignified, xylem vessels
made of dead cells with no end
Function: transport water and dissolved mineral ions up
the stem
Phloem: Living tissue made up of phloem cells which
transport sucrose (the product of photosynthesis) to
where it is needed for growth or to be stored as starch.
Plant fibres and starch are renewable resources unlike oil which is limited and becomes
increasingly expensive. They are also biodegradable and are of better quality in some cases10.
Plant resources can be carbon neutral; they take in carbon as they grow and release it as they
are burnt or used. Thus, these contribute to sustainability.
10
For instance; clothing made from cotton are more absorbent and therefore more comfortable to wear
than those made from synthetic fibres
cotton:
Short, single fibres found around cotton seeds are spun to form long, continuous threads with
are then woven together to make fabrics.
Wood:
A composite material made of lignified cellulose fibres embedded in hemicelluloses 11. Wood has
a very high tensile strength at is quite flexible making it suitable for weight-bearing in buildings,
making furniture and making boats.
To make paper:
➔ Soak in a strong alkali such as caustic soda
➔ Pulp consisting of cellulose and lignified cellulose left in water
➔ Thin layers of pulp pressed onto frames
➔ Layers of pulp dry to form paper
Bioplastics are made from renewable biological resources that at the end of their useful life
rapidly biodegrade and return nutrients back into the system.
11
Polysaccharides found in cell walls which are less complicated in structure than cellulose.
12
Oily nature of plastics allow them to concentrate oily toxins
Contemporary drug testing
PRE-CLINICAL TESTING
Animal studies and laboratory studies on isolated cells and tissue cultures assesses safety and
determines whether the compound is effective against the target disease.
Clinical Trials:
PHASE 1
A small group of (usually healthy) volunteers are told about the drug and given doses. The trial
confirms whether or not the compound is being absorbed, distributed, metabolised and excreted
by the body in the way predicted by the laboratory tests.
*They must be of the same age/gender and they must have the same general health
levels and lifestyles
PHASE 2
Small groups of volunteer patients e.g. 100-300 people with the disease, are treated to
determine the drug’s effectiveness.
PHASE 3
Large group of patients (1000-3000 people) are selected and divided into two groups. One is
given the compound being investigated; the second is given a placebo (in some cases an
existing treatment is used rather than a placebo). A placebo is an inactive substance that looks
exactly like the drug but doesn't do anything.
If the results show significant improvements in the patients receiving the treatment compared to
those with the placebo or standard treatment then compound being investigated is effective.
Often a DOUBLE BLIND TRIAL is used which is when neither the patients nor the doctors know
who is having the compound under investigation and who is having the placebo.
Biodiversity
The variety of organisms present in a given habitat
➔ Species richness: The number of species present in a habitat in a given time.
➔ Species evenness: How close in numbers each species in an environment is.
➔ Genetic diversity (within a species): The variety of alleles in a gene pool of a species;
the more genetic variation the better bc. Higher chances of survival
Endemism
The ecological state of a species being unique
to a defined geographic area (in the wild) where
they are not found anywhere else.
Concept of Niche
A niche is the specific role or function of an organism in its habitat which is a result of its
physical, anatomical and physiological adaptations.
Adaptations:
➔ Behavioral; The ways an organism acts
◆ I.e: bird calls, migration
➔ Physiological: processes that take place inside an organism’s body
◆ I.e: Making venom, secreting slime
➔ Anatomical: Structural features of an organism
◆ I.e: long beaks, sharp claws
Natural selection:
The differential survival and reproduction of individuals due to differences in phenotype.
This is a type of directional selection which shows a change from one phenotypic property to a
new one more advantageous in the circumstances.
*This often begins with geographical isolation which changes the selection pressures on a
species
1. There are genetic differences13 between organisms within the same species which
results in different phenotypic traits.
2. Some traits are favourable; they make organisms fitter as these adaptations make them
better suited to their environments14
3. Many favourable traits are heritable, meaning they can be passed onto offspring
4. The fitter15 animals are more likely to survive and pass16 on their advantageous
phenotypic traits to their offspring
Charles Darwin Identified this as a key mechanism of evolution, the change in heritable traits of
a population over time. Under the idea of the survival of the fittest, organisms17 with favourable
traits are most likely to reproduce and pass on the alleles that code for these traits as they give
them an advantage in a particular niche. Over generations, the alleles that mark their variation
become more frequent and eventually whole populations change. This can also lead to
speciation whereby new and distinct species are formed in the course of evolution.
13
Often caused by random mutations
14
Also, changes in selection pressures (environmental factors) may reduce reproductive success thus
contributing to evolutionary change or extinction through the process of natural selection
15
Have adaptations which give them the upper hand in terms of their chances of survival and
reproduction
16
The environment cannot support unlimited growth; not all individuals reproduce to their full potential
17
All organism face the struggle for survival and different selection pressures can
Conservation refers to the maintainance and protection of a living and changing environment in
order to maintain biodiversity.
18
I.e; they may not know how to interact with other animals
19
Between -20 and -40 degrees celsius
4. Most plant seeds store well and are capable of germinating for up to 200 years.
Scientific research is carried out by zoos and botanic gardens which work closely with university
departments. Education regarding the impacts of falling biodiversity and the principles of
conservation can help to raise awareness of conservation issues including the need for
conservation and the available opportunities for it.
*Core practicals; tensile strength, plant mineral deficiencies, antimicrobial properties of plants