Group7 Thesis
Group7 Thesis
Department of Biotechnology
By:
Wolkite, Ethiopia
June, 2018
Acknowledgements
First of all, we would like to give special thanks go to our family for their kind
understanding, warmth and wonderful job as both financial backing and for taking care
of us physically and encouraging us through all the obstacles. Meanwhile, we express
our cordial thanks, whole hearted gratitude, profound regards and the sincerest
appreciation to our advisor Mr. Belay Tilahun for his time, unreserved guidance and
useful comments on our work starting from proposal development to completion of this
senior project work. We would also like to acknowledge Mis. Meseret Guta from Jimma
University, department of microbiology for her unlimited support during bacterial
identification. We would also like to thank Biotechnology laboratory technicians; Mr.
Sembeto Beri and Biology department laboratory technician Mr. Enkossa for his
technical and material support. Finally, we extend our deepest appreciation to all staff
members of biotechnology department for their help in accomplishing our project.
Isolation, Identification and Characterization of Thermostable Amylase
Producing Bacteria from Woliso Hot Spring, Woliso, Oromia, Ethiopia
Firdos Abdulreshid1, Mekdes Tekleyohannes, 1 Merhun Degefu1, Mulatu Mokonon1, Olana
Assefa1, Tajer Abdo1, Tegegn Tanto1 and Belay Tilahun2
1
Wolkite University 4th year Biotechnology Department graduate students
2
Wolkite University, Department of Biotechnology, Email: [email protected]
Abstract
Extremophilic microorganisms are microorganisms that are stable over a wide range of
harsh environmental conditions. Thermophile microorganisms live at 45°C–80°C and
produce enzyme which are thermostable. Thermostable microbial amylases are more
simplified and economical than other sources. The present research was aimed to isolate
and characterize thermostable amylase producing bacterial isolates from Woliso hot
spring of Negash Lodge. So, thirty samples were collected from the source; then, then
from each sample 1ml was transfer on starch agar medium and incubated at 53°C for
48 hrs. Then 3 to 5 colonies were selected based on their colonial characteristics.
Totally 18 isolates were isolated and 10 isolates were secerned based on their ability to
hydrolyze starch. Different biochemical tests were done to identify isolates at genus
and species level i.e. KOH test oxidase test, indole test, H2S test, VP test, citrate test,
catalase test and methyl red test based on Bergey’s Manual of systematic bacteriology.
Amylase were produced by submerged liquid medium with 1% soluble starch at pH 7
and 53˚C for 2 days in shaker incubator with 100 rpm. The optimum parameters where
enzymatic activity of crude extract active was determined by measuring hydrolysis of
starch at 660nm using spectrophotometry. The data were analyzed by SPSS version 20
software. The results revealed that three enzymes from Bacillus spp. (SED2),
Pseudomonas spp. (SED5) and Bacillus spp. (SED7) have maximum activity at 4%
starch, 65˚C and pH of 8.5. Lactobacillus spp. (W20-0) and Bacillus cereus (SED12-1)
at 8% starch, 75 and 65˚C, 8.5 and 7.5pH respectively. Bacillus subtilis (W26-2)
Bacillus licheniformis (W20-1), Lactobacillus spp. (SED10) at 6%starch; 35, 65, 45˚C;
6.5, 4.5, 4.5 pH., Bacillus spp.(SED8-3) &Bacillus spp. (W9) at 4% & 2%, 55˚C, 8.5
&4.5 pH., and have maximum activity at 4% starch, 65˚C and pH of 8.5 and at 8%
starch, 75 and 65˚C, 8.5 and 7.5pH respectively., Lactobacillus spp. (SED10) at
6%starch; 35, 65, 45˚C; 6.5, 4.5, 4.5 pH. Bacillus spp. (SED8-3) & Bacillus spp. (W9)
at 4% & 2%, 55˚C, 8.5 &4.5 pH. The amylase produced by bacterial isolates from
Woliso hot spring was thermostable and can performed from 65oC up to 75oC. The
optimum hydrolysis conditions required for amylase activity were optimized. For most
of the enzymes the optimum temperature was observed to be 65oC; whereas optimum
substrate concentration and pH for most of them were 4% starch and 8.5pH
respectively. They were active at a various starch conditions (2%-10%), pH of 4.5-8.5,
and temperature of 35-75°C.Generally, the bacteria isolated were thermophilic and
produced thermostable amylase. Therefore, Woliso hot spring could be the source of
thermophilic microorganisms and thermozymes as well.
Keywords: Hot spring, optimization, thermostable amylase, thermophilic
microorganisms.
ii
Table of contents
Contents
Acknowledgements .....................................................................................................................i
Abstract ......................................................................................................................................ii
Table of contents ....................................................................................................................... iii
List of figures .............................................................................................................................. v
List of Table ............................................................................................................................... vi
List of abbreviations ................................................................................................................. vii
1. Introduction ....................................................................................................................... 1
1.1. Statement of problem ............................................................................................... 3
1.2. Objective of the study ............................................................................................... 4
General objective .............................................................................................................. 4
Specific objective ............................................................................................................... 4
1.3. Significance of the study............................................................................................ 5
2. Literature Review .............................................................................................................. 6
2.1. Thermophilic Microorganisms................................................................................... 6
2.1.1. Thermophilic fungi................................................................................................. 6
2.1.2. Thermophilic Bacteria ........................................................................................... 7
2.2. Source of Thermophilic Bacteria ............................................................................... 7
2.2.1. Production method ........................................................................................... 8
2.3. Amylase Producing Thermophilic Bacteria................................................................ 8
2.4. Microbial Source of Thermostable Amylase ............................................................. 9
2.5. Microbial Enzyme production ................................................................................. 10
2.5.1. Process parameters for amylase production .................................................. 10
2.6. Applications of Amylase .......................................................................................... 11
3. Materials and Methods ................................................................................................... 13
3.1. Sample collection and Description of the Study sites ............................................. 13
3.2. Isolation of pure culture .......................................................................................... 13
3.3. Characterization of thermophilic isolates ............................................................... 14
3.1.1. Biochemical characterization of isolates ......................................................... 14
3.4. Crude Thermostable Amylase production............................................................... 16
3.5. Enzyme activity Assay .............................................................................................. 16
3.6. Enzymatic starch hydrolysis condition optimization ............................................... 16
3.9.1. Substrate concentration optimization ............................................................ 16
3.9.2. Optimum pH determination ............................................................................ 17
3.9.3. Optimum temperature determination ............................................................ 17
iii
3.7. Data analysis ............................................................................................................ 17
4. Results and discussion ..................................................................................................... 18
4.1. Physical characteristics Sample ........................................................................... 18
4.2. Isolation of pure culture ...................................................................................... 18
4.1.6.1. Biochemical characterization ...................................................................... 18
5. Starch Hydrolysis test .............................................................................................. 20
4.1.6.2. Salt Tolerance Test ...................................................................................... 21
5.1. Crude Thermostable Amylase production............................................................... 22
5.1.1. Enzyme activity Assay .......................................................................................... 22
5.1.2. Substrate concentration optimization ................................................................ 22
5.1.3. Optimum pH determination ................................................................................ 23
5.1.4. Optimum temperature determination ................................................................ 24
6. Conclusion ....................................................................................................................... 26
7. Recommendations........................................................................................................... 27
8. References ....................................................................................................................... 28
iv
List of figures
Pages
Figure 1 Isolation of pure culture................................................................................. 13
Figure 2 Clear zone observed around amylase-producing bacteria ............................. 20
Figure 3 Effect of salt concentration on bacterial isolates ........................................... 21
Figure 4 profile plot 2 showing estimated marginal plot ............................................. 22
Figure 5 Optimum pH value for amylase activity ....................................................... 24
v
List of Table
Table 1 Morphological characteristics of bacterial isolates from water and Sediment
samples of Woliso hot water spring ............................................................................. 18
Table 2 Biochemical characteristics of the bacterial isolates isolated from Woliso hot
spring............................................................................................................................ 19
Table 3 Effect of salt concentration on bacterial isolates ............................................ 21
Table 4 Substrate concentration optimization for amylase activity ............................. 23
Table 5 Effect of pH on amylase activity .................................................................... 23
Table 6 Effect of temperatures on amylase activity..................................................... 25
vi
List of abbreviations
ANOVA: Analysis of Variance
nm: nanometer
SED: Sediment
W: Water
vii
1. Introduction
Thermophilic microorganisms have the characteristics of adapting to survive in harsh
environmental conditions (Horikoshi et al., 1998). Existence of life at high
temperatures is quiet fascinating. At elevated temperatures, only thermophilic
microorganisms are capable of growth and survival. Thermophilic bacteria are
microbes that mostly inhabit hot springs, live and survive in temperatures above 42°C.
(Wajeeha et al., 2011). The discovery of thermophilic bacteria capable of carrying out
life processes in the boiling hot springs of Yellowstone National Park has become a
foundation of developments in medicine and biotechnology. Then, thermophiles have
been isolated in geothermal features of all over the world (Moracci et al., 2001).
Thermophiles have been isolated from different ecological zones (e.g., hot springs and
deep sea) of the earth. Thermophiles can be categorized into moderate thermophiles
(growth optimum, 50–60°C), extreme thermophiles (growth optimum, 60–80°C), and
hyperthermophiles (growth optimum, 80–110°C) (Gupta et al., 2014). Thermophilic
microorganisms can be classified as Gram-positive or Gram-negative, they can exist
under aerobic or anaerobic conditions, and some of them can form spores. The
microorganisms with the highest growth temperatures (103–110°C) are members of the
genera Pyrobaculum, Pyrodictium, Pyrococcus, and Melanopyrus belonging to
Archaea; within Fungi, the Ascomycetes and Zygomycetes classes have high growth
temperatures (Busk et al., 2013; Kumar et al., 2014).
Due to their increased importance, potential applications, and roles in different fields,
scientists have concentrated their studies to discover new genus and species across the
world (Yonedaet al., 2013; Cihanet al., 2014; Aannizet al., 2015)
Ethiopia have difrente echological areas having from highst altitude tolowst altitudinal
varation which gives achanse of getting different ecologies including extrim
environments like hot springs live volcano etc. Woliso hot spring is one of the extrim
environment where thermophiles will be found which is located at Negash Lodge of
Woliso and surrounding area is one of the hot springs in Oromia region of Ethiopia.
Woliso hot spring is one of the potential source of thermotolerant amylase producing
microorganisms. The microbial lode of the hot spring has been not yet fully explored.
2
1.1.Statement of problem
For industrial applications, enzymes must be stable under process conditions. However,
amylases that are derived from plants and animals are not sufficient enough to be used
at industrial scale. In addition to their production in less quantity, enzymes from animal
and plants are not thermostable. These make them less stable for industrial applications.
Hence, thermostable microbial enzymes play an important role in different industries
due to their stability at harsh environmental conditions, such as extreme temperatures.
Even though, its uses at different areas of industries hold a great position, the
thermostable amylase produced by thermophilic bacteria for industrial application in
Ethiopia has not yet been fully explored. Several researchers have reported
thermophilic bacteria from diverse environmental habitats such as geothermal sites and
hot springs around the world. Here in our country we have diversified ecological areas
having extreme conditions. From those woliso hot spring is one of the area having this
future. However, the thermophilic microbes of this site and their enzymes have not been
reported till date. So, isolation and characterization of microbes from this site is
important to know the diversity of thermophilic bacteria that can produce thermostable
amylase.
3
1.2.Objective of the study
General objective
✓ The main objective of study is to isolate, identify and characterize
thermostable amylase producing bacteria from Woliso hot spring.
Specific objective
✓ To isolate thermophilic bacteria from Woliso hot spring
✓ To identify thermophilic bacteria from Woliso hot spring
✓ To characterize thermostable bacterial isolates from Woliso hot spring
✓ To screen amylase producing bacterial isolates.
✓ To extract crude thermostable amylase from bacteria by submerged
fermentation.
✓ To assess the enzymatic activity of crude thermostable amylase enzymes
on starch substrate.
✓ To determine optimum conditions for enzymatic starch hydrolysis.
4
1.3.Significance of the study
Nowadays industry has been minimizing the use of chemicals or replaced by enzymes
to solve environmental problems associated with those chemicals. But most of
industries have operated at high temperature. Consequently, thermostable enzymes are
most significantly applicable because thermophilic process is more stable, faster, needs
lower costs. They have higher stability to organic solvents, acidic and alkaline pH and
detergents. As a result, thermostable amylases are of great significance in industrially
viable technology and have a number of commercial applications due to their overall
inherent stability. So, this research will increase thermostable amylase enzymes for
industrial use as amylase is one of the most important industrial enzymes, having
applications in different industrial processes such as brewing, baking, textiles,
pharmaceuticals, starch processing, and detergents. Therefore, in this regard searching
enzymes from such environment will fill the gap to feed different industries.
5
2. Literature Review
2.1.Thermophilic Microorganisms
Thermophilic microorganism is a microorganism that thrives at relatively high
temperatures, between 45 and 80 °C. Thermophiles, meaning heat-loving organisms,
are organisms with an optimum growth temperature of 50 °C or more, a maximum of
up to 70 °C or more, and a minimum of about 40 degrees C, but these are only
approximate. Some extreme thermophiles (hyperthermophiles) require a very high
temperature (80 °C to 105 °C) for growth. Their membranes and proteins are unusually
stable at these extremely high temperatures. Thermophile bacteria live at 45°C–80°C
and produce enzyme which are thermostable. Enzymes from thermophile bacteria are
also known as thermophile enzyme because they are thermostable and thermo-active.
The thermophile enzyme, like protease, lipase and amylase that are thermostable
happened because those were resistant to high temperature and pH. Thus, many
important biotechnological processes utilize thermophilic enzymes because of their
ability to withstand intense heat (Gustina and Ruth, 2018).
Originally, studies did not focus on the survival of thermophilic organisms even though
the existence of thermophilic organisms was well known. There were two types of
observations that led to the discovery and cultivation of thermophilic organisms.
Firstly, it was discovered by standard bacterial culture procedures mainly in the canning
industry that led to the cause of many problems by heat tolerant, spore forming bacteria.
The second type of research resulted from ecological studies of organisms living in
geothermal habitats. Later, because of careful observations, organisms living at high
temperatures were discovered. Narayan et al. (2008) conducted a study to determine
the presence of aerobic thermophilic bacteria in Savusavu hot springs in Fiji. The
existence of thermophilic organisms had though been known from the early years of
bacteriology (Michael et al., 2009).
6
animals, snuff, and municipal refuse, and other accumulations of organic matter
wherein the warm, humid, and aerobic environment provides the basic physiological
conditions for their development. In these habitats thermophiles may occur either as
resting propagules or as active mycelia depending on the availability of nutrients and
favourable environmental conditions (Lee et al., 2014; Salar and Aneja, 2007).
7
Many of the prokaryotes that grow in the most extreme environments are achaea- a
group that is clearly distinguishable from both the present-day bacteria and the
eukaryotes. Members of the genus Sulfolobus (achaea) are among the best-studied
hyperthermophiles. They are commonly found in geothermal environments, with a
maximum growth temperature of about 85-90oC, optimum of about 80oC and minimum
of about 60oC. They also have a low pH optimum (pH 2-3) so they are termed
thermoacidophiles. Sulfolobus species gain their energy by oxidizing the sulphur
granules around hot springs, generating sulphuric acid and thereby lowering the pH
8
High-temperature environments are of special interest, in that they reveal the extremes
to which evolution has been pushed and their distinct strategies in carbon cycling
(Brown et al., 1985).
A wide range of bacterial species has been isolated for amylase secretion. Most
are Bacillus species (B. subtilis, B. stearothermophilus, B. amyloliquefaciens, B.
licheniformis, B. coagulans, B. polymyxa, B. mesentericus, B. vulgaris, B.
megaterium, B. cereus, B. halodurans, and Bacillus sp.), but amylases from Rhodother
musmarinus, Corynebacterium gigantea, Chromohalobacter sp., Geobacillus
thermoleovorans, Lactobacillus fermentum, Lactobacillus manihotivorans,
and Pseudomonas stutzeri have also been isolated (Hussain et al.,2013). The genus
Bacillus produces large variety of extracellular enzymes, of which amylases and
proteases are of significant industrial importance. Thermostable amylases were
produced by Bacillus spp., Bacillus licheniformis, Bacillus halodurans and B.
amyloliquefaciens (Archanaet and Tulasi, 2011).
9
2.5.Microbial Enzyme production
Enzymes are prepared by inoculating a microbial strain in to nutrient broth and
incubating in shaker for 24 hrs. The inoculums is then transferred aseptically to
production medium (Bacteriological peptone, MgSO4.7H2O; KCl; Starch and
incubating it in incubator shaker at 180 rpm for 14 hrs. This production is carried
out in shake flask fermentation using production media (Singh et al., 2015).
2.5.1.2.pH
Enzymes are pH sensitive and hence care must be taken to control the pH of the
production process. Pyrococcus furiosus produces α-Amylase which shows activity at
an optimum pH of 6.5–7.5 (Haki and Rakshit, 2003). Thermophilic microorganisms
such as P. woesei and Thermococcus profundus exhibited optimal production of α-
Amylase at pH value of 5.0. Bacillus amyloliquefaciens produces the enzyme with an
optimum pH of 7.0 (Ramachandran, 2004, Reddy et al., 2004).
2.5.1.3.Substrate
Optimum substrate concentration is a critical factor for the stability of enzyme
produced. Bacillus subtilis was studied for production of α-Amylase using solid state
fermentation for 48 hours at 37°C with wheat bran as substrate. The specific activity of
10
amylase was found to be 13.14 µmol/mg/min at 40° (Ajita and Thirupathihalli, 2014;
Gangadharan et al, 2006).
2.6.Applications of Amylase
Starch degrading amylase enzymes are most important in the biotechnology industries
with huge application; most widely used in industries such as food, fermentation, starch
processing, textile and paper. Amylase has a great deal of application in starch
saccharification. The amylolytic enzymes find a wide spectrum of applications in food
industry for production of glucose syrups, high fructose corn syrups, maltose syrups,
reduction of viscosity of sugar syrups, reduction of haze formation in juices,
solubilization and saccharification of starch for alcohol fermentation in brewing
industries, and also find a wide range of application in baking, paper, textile and
detergent industry (Naidu and Saranraj, 2013; Ritu et al., 2017).
Alternative energy source that is widely studied is bioethanol, a renewable energy
which is more environmentally friendly and reliable. Generally, bioethanol is produced
from carbohydrate materials, either from simple or complex carbohydrates. Starchy
material is the most widely used raw material for bioethanol. In the bioethanol
production process, starch in carbohydrates is firstly converted into glucose, and then
the glucose is fermented to form bioethanol. Conversion of starch into glucose can be
done chemically or enzymatically using amylase enzyme group. Amylase is supposed
to be active and stable at high temperatures such as in the processed gelatinization (100-
110°C) and liquefaction for the efficiency of the process, (Ritu et al.,2017)
11
12
3. Materials and Methods
3.1.Sample collection and Description of the Study sites
Woliso is the capital of South West Shoa administrative zone. The town is located at a
distance of 114 kilometers south west of Addis Ababa, along the Addis Ababa-Jimma
route. The coordinates of the town are 8°32′N latitude and 37°58′E longitude. It is
characterized by temperate type of climate with daily temperature ranging from 180c
and 270C and is located 1900m above sea level. The hot springs located at Negash
Lodge of woliso and surrounding area is one of the hot springs in Oromia region of
Ethiopia. The present study will be conducted at the laboratory of Biotechnology
Department, Wolkite University from April to June 2018. Total of 30 samples (i.e. 15
water samples and 15 sediment samples) were collected from Woliso hot spring
aseptically in falcon tubes and the samples were transported in icebox aseptically to
Wolkite University, Biotechnology laboratory, for processing and microbial isolation.
Sample processing, laboratory isolation, identification and preservation of bacteria
were carried out in Wolkite University, Biotechnology laboratory. The temperature and
pH of sample were recorded during the time of sampling.
13
purified by repeated streak-plating on SAM agar for three times. The pure isolates were
maintained on nutrient broth containing 10%glycerol at -4oC and sub-cultured every
four weeks until required for characterization and kept at -80oC for long term
preservation (Abebe, 2016; Gustina Ruth, 2018).
14
positive result was formation of oxygen in the form of bubble and in negative result no
bubble was formed (Paik, 1980).
15
3.4. Crude Thermostable Amylase production
Positive amylase producer isolates were transferred in to production medium for
production of thermostable amylase. The production medium contains soluble starch
(10 g/L), peptone (5 g/L), (NH4)2 SO4 (2 g/L), KH2PO4 (1 g/L), K2HPO4, (2 g/L), MgCl2
(0.01 g/L) preparedat7 pH. 2ml of inoculum was taken in to 250 ml Erlenmeyer flask
containing 40ml of production medium. After two days of incubation at 530c and
agitation with shaker at 100 rpm. After incubation, fermented broths were centrifuged
at 4000 rpm for 25 minutes in a centrifuge. As amylase is extracellular enzyme, it is
released to the medium as a supernatant (Ekka and Namdeo, 2018). Hence, the
supernatant was taken and served as a crude amylase for further enzyme activity. This
crude enzyme extract was used in amylase enzyme activity measurement and
characterization (Abebe, 2016; Alemayehu and Temam, 2017).
16
3.9.2. Optimum pH determination
Each enzyme isolates and substrate at the optimum concentration was dissolved in 5 ml
of various buffers (pH 4.0 to 10.0). For pH adjustment Tris-HCl and borax NaOH buffer
were used. Then after incubation for 45 minutes, the enzyme activity variation at
different pH level was measured using spectrophotometer (Singh et al., 2016; Subra et
al., 2013; Suman and Ramesh, 2010).
17
4. Results and discussion
18
reaction, four isolates were positive. This result depicted that the isolates were aerobic.
The remaining 6 isolates were negative indicating they were not aerobic. The positive
isolates had formed bubble, while the negatives had not. Nine isolates were positive for
methyl red, forming red and pink color. This confirmed that the isolates have the ability
to form acid up on fermentation. All were shown negative reaction to VP test. They
were not turned to red. For citrate test, all isolates except one were developed blue color.
They were recorded as a positive citrate reaction. This made sure that the isolates able
to utilize citrate as a carbon source and ammonium as a nitrogen source as presented in
Table 2.
Table 2 Biochemical characteristics of the bacterial isolates isolated from Woliso hot
spring
Sample Bacterial Biochemical tests
code Isolates Gra Starch Citra Methyl VP Catala H2S Oxidase Indole
m hydrol te red test tes se test test test test
test ysis t
Sed-2 Bacillus spp. - + + +(pink) - + - + +
W-26-2 Bacillus subtilis + ++ + +(red) - + - + +
Sed-8-3 Bacillus spp. + + + +(pink) - - - - +
W-20-1 Lactobacillus spp. + + +
W-20-0 Bacillus cereus + + + +(pink) - - - + -
Sed-12-1 Bacillus + + + +(pink) - - - + +
licheniformis
Sed-7 Bacillus spp. - +++ - -(yellow) - + - + +
Sed-5 Pseudomonas spp. - ++ + +(red) - - - + +
Sed10 Lactobacillus spp. + +++ + +(pink) - - - Delayed -
+
W-9 Bacillus spp. + ++ + + (red) - + - Delayed _
+
19
5. Starch Hydrolysis test
After the plates were flooded with IKI solution (iodine, 1 g; potassium iodide, 2 g;
distilled water, 100 ml). A clear zone around a colony was recorded as positive reaction.
The clear zone indicates the level of starch hydrolysis capacity of isolates. Potential
isolates can produce large clear zone and indicates complete hydrolysis of starch.
A clear zone around a colony on starch (after addition of iodine) gave an indication
amylase producing bacteria. The isolate showing the maximum zone of hydrolysis was
selected for amylase production because it is an indication for the bacteria to produce
amylase based on its hydrolysis potential (Amin and Zusfahair, 2012; Singh et al.,
2015). Similarly, in our study, from 18 bacterial isolates 10 isolates were selected as a
strong positive for the reaction. This procedure showed a positive result for the
Aspergillus strain as Singh et al., 2015 indicates. The formation of clear zone observed
was due to the fact that the amylase produced during the growth of the organisms has
hydrolysed the starch around the colony. The unhydrolysed part was appeared as blue
black indicating negative activity of amylase producer bacteria.
20
4.1.6.2. Salt Tolerance Test
Selected isolates have different salt tolerance for different sate concentration some have
low salt tolerance capacity and others have high salt tolerance capacity as it is indicated
in table 3.
The isolates were tested for salt tolerance at different NaCl concentrations (0.5, 1.5,
2.5, 3.5, and 4.5). Above 50% of them were shown maximum performance, at 0.5%;
40% were at 3.5%; 20% were performed well at all concentrations. Most were
performed less at 1.5% and the growth of three isolates was decreased at 4.5%.
Generally, the result revealed that the isolates could be survived at saline environments.
SALT TOLERANCE
0.5 1.5 2.5 3.5 4.5
2.5
1.5
0.5
0
SED-10 W-9 SED-12 W-20-1 SED-7 W-20-0 W-26-2 SED-2 SED-8-3 SED-5
21
5.1.Crude Thermostable Amylase production
5.1.1. Enzyme activity Assay
The amylase activity assessed by measuring OD value and the observed result was as
the basis of level of productivity of the amylase, an isolate producing a maximum of
amylase activity was Sed-5 (Pseudomonas spp.) and W-20-0 (Lactobacillus spp.) used
for detailed investigation as indicated to Figure 4. Screening of the amylase producing
organisms was carried out on the starch agar. Based on the enzyme activity assay, all
were positive. However, SED5(Pseudomonas spp.) involved the highest activity and
W20-0 (Lactobacillus spp.) shown the second maximum enzyme activity next to
SED5(Pseudomonas spp.).
22
Table 4 Substrate concentration optimization for amylase activity
Sample Bacterial Isolates Starch concentration p
code 2 4 6 8 10
Sed-10 Lactobacillus spp. 1.99± 0.02 2.62±0.47 2.84±0.18 2.51±0.35 2.48±0.27 0.000
W-9 Bacillus spp. 2.63±0.24 2.59±0.28 2.54±0.12 2.40±0.59 2.45±0.54 0.670
Sed-12-1 Bacillus cereus. 2.25±0.83 2.75±0.19 2.56±0.41 2.52±0.49 2.53±0.13 0.100
W-20-1 Bacillus licheniformis. 2.68±0.15 2.53±0.41 2.72±0.16 2.53±0.33 2.34±0.46 0.038
Sed-7 Bacillus spp. 2.59±0.014 2.76±0.03 2.62±0.08 2.6±0.07 2.51±0.14 0.000
W-20-0 Lactobacillus spp. 2.44±0.43 2.57±0.39 2.48±0.33 2.66±0.08 2.55±0.22 0.266
W-26-2 Bacillus Subtilis. 2.50±0.724 2.55±0.36 2.86±0.33 2.44±0.62 2.44±0.39 0.152
Sed-2 Bacillus spp. 2.21±0.03 2.44±0.04 2.56±0.57 2.64±0.31 2.50±0.22 0.015
Sed-8-3 Bacillus spp. 2.48±0.63 2.65±0.29 2.59±0.23 2.09±2.17 2.43±1.01 0.613
Sed-5 Pseudomonas spp. 2.65±0.03 2.75±0.06 2.71±0.74 2.58±0.08 2.46±0.05 0.152
Following the positive activity of the amylase, the enzymatic hydrolysis process
parameters such as optimum substrate concentration, pH, and temperature optimization
were determined. For substrate optimization, starch at different concentration (2%, 4%,
6%, 8% and 10%) was used. Out of 10 enzymes, 40% of them had utilized 4% starch;
30% had used 6% starch for their maximum growth. 20% were seen to have optimum
activity at 8% starch, where as 10% had used 2% starch as the optimum substrate.
23
was supported by Reddy et al., 2003 stated, the crude amylase was stable over a pH
range of 4.5 to 8.5. However, their optimum pH was varied at acidic, neutral and basic
pH. Five (5) of them were developed maximum hydrolysis activity at 8.5 pH. This result
indicated that they have maximum activity at alkaline environments than they do at
acidic conditions. Three of them were observed to show optimum activity at pH of 4.5
revealing their optimum activity was at acidic environment than basic. For the
remaining two neutral pH of about 6.5 and 7.5 were determined as optimum. This
investigation depicted that the two enzymes’ activity was highest at neutral
environments than at alkaline and acidic conditions. Another most important parameter
for the enzyme activity was temperature (Reddy et al., 2003; Sundaram et al., 2014).
pH range
3
2.5
2
1.5
1
0.5
0
24
Table 6 Effect of temperatures on amylase activity
Sample Bacterial isolate Temperature p
code 35 45 55 65 75
W-26-2 Bacillus subtilis 1.08±0.004 1.04±0.007 1.01±0.01 1.01±0.005 0.39±0.0062 0.000
Sed-10 Lactobacillus spp. 0.09±0.02 0.89±0.007 0.86±0.01 0.86±0.004 0.30±0.01 0.000
Sed-8-3 Bacillus spp. 0.27±0.002 0.37±0.06 0.38±0.01 0.38±0.01 0.31±0.02 0.000
W-9 Bacillus spp. 2.45±0.13 2.49±0.01 2.51±0.02 2.45±0.01 2.05±0.01 0.000
Sed-7 Bacillus spp. 0.28±0.01 0.33±0.007 0.32±0.01 0.43±0.005 0.18±0.01 0.000
Sed-2 Bacillus spp. 0.29±0.004 0.28±0.007 0.32±0.01 0.37±0.01 0.20±0.01 0.000
Sed-5 Pseudomonas spp. 0.15±0.02 0.36±0.005 0.37±0.004 0.45±0.01 0.17±0.01 0.000
Sed-12-1 Bacillus cereus 0.33±0.005 0.32±0.001 0.41±0.01 0.42±0.01 0.33±0.006 0.000
W-20-0 Lactobacillus spp. 0.19±0.006 0.21±0.01 0.20±0.01 0.19±0.01 0.94±2.88 0.367
W-20-1 Bacillus lichenoformis 1.05±0.08 1.07±0.01 1.09±0.02 1.08±0.03 1.30±0.009 0.000
In this study, to find the optimum temperature for amylase activity, at the optimum pH
and substrate concentration, temperature was varied at 350c, 450c, 550c, 650c and 750c.
Even though, Ved Pal et al., 2016 reported that thermostable amylase was stable at
broad range temperature (50-800c) and the same is true for amylase in this work, their
optimum temperature was measured as below. 40% were performed best at 650c; 20%
at 550c; 20% at 750c; 10% at 350c, and 10% at 450c. Bacterial species, such as B. subtilis,
B. megaterium, B. amyloliquefaciens and B. licheniformis which produce α-amylase
enzymes that can withstand a temperature of 70oC have been reported previously
(Hussain et al., 2013). Likewise, in the present work, Bacillus licheniformis produced
thermostable amylase that can withstand a temperature of 750c. In addition,
Lactobacillus which was isolated from W-20-0 produced amylase at the same
temperature. Generally, this result confirmed that about 90% of the amylases were
shown maximum starch hydrolysis activity at a temperature of greater than 45 0c. That
means almost they were themostable and the bacteria isolated from the Woliso hot
spring were thermophilic and they had been the source of thermozymes.
25
6. Conclusion
The amylase produced by bacterial isolates from Woliso hot spring was thermostable
and can performed from 65 oC up to 75 oC. The optimum hydrolysis conditions required
for amylase activity were optimized. For most of the enzymes the optimum temperature
was observed to be 65oC; whereas optimum substrate concentration and pH for most of
them were 4% starch and 8.5pH respectively. Despite these optimum conditions, the
enzymes were active over a wide range of conditions. They were active at a various
starch conditions (2%-10%), pH of 4.5-8.5, and temperature of 35-75°C.Generally, the
bacteria isolated were thermophilic and produced thermostable amylase. Therefore,
Woliso hot spring could be the source of thermophilic microorganisms and
thermozymes as well.
26
7. Recommendations
Since this is one of the biological resources of our country it is necessary to study and
explore further microbiological aspects of the Woliso hot spring using molecular
technique of characterization and identification of the thermophiles and thermostable
amylase producing microorganisms and it is better to go for large scale thermostable
amylase production.
27
8. References
Aanniz T, Ouadghiri M, and MelloulM. (2015). Thermophilic bacteria in Moroccan
hot springs, saltmarshes and desert soils. Braz. J. Microbiol. 46(2):443–453.
doi: 10.1590/s1517-838246220140219.
28
Bergey D.H.(1919).Thermophillic Bacteria .J. Bacteriol.,4(4) 301-306.
Cihan A. C., Cokmus C., Koc M.and OzcanB.(2014). Anoxybacillus calidus sp.
Thermophilic bacterium isolated from soil near a thermal power plant.
Int.J.Sys.and Evol. Microbiol.; 64(1):211–219. doi: 10.1099/ijs.0.056549-
0.056549 [PubMed] [Cross Ref]
29
and characterization of their amylase activity. Afr. J. Microbiol., and Res.;
11(21),851-859:Doi :10.5897/ASMR 2017.8543.
Hussain I., Siddique F., Mahmood M. S.and Ahmed S. I.(2013).A review on the
microbiological aspect of α-amylase production. Int. J. Agri. and Biol.;
15(5):1029–1034.
30
Manikaran hot springs. Ann. Microbiol.; 64(2):741–751. doi:
10.1007/s13213-013-0709-7. [Cross Ref]
Lee Hanbyul, Lee Youngmin, Jang Yeongseon, Lee Hwanhwi, AhinByoung Jun,
Km Gmu-Hyeok and Kim Jac-Jin.(2014).isolation and analysis of the
enzymatic properties of Thermopillic fungi from compost
.Micobiol.;42(2):181-184.
Melzoch K., Votruba J., Sakavora B., Piterkova L., Ryachteya M.(2004),
Thermophilic bacterial colony growth and its consequences in the food
industry. Czec j. food sci, 22: 1-8
Murray, P.R, E.J. Baron, J.H. Jorgensen, M.A. Pfaller, & R.H. Yolken(2003).Man.
Clin. Microbiol. 8thed ASM. Washington D.C.
31
Pandey A, Soccol CR and Mitchell D.(2000).New developments in solid state
fermentation: I-bioprocesses and products. Process Biochem; 35:1153-1169.
Ramachandran, S., Patel, A. K., Nampoothiri, K. M., Chandran, S., Szakacs, G.,
Soccol, C. R., & Pandey, A.,(2004).Alpha amylase from a fungal culture
grown on oil cakes and its properties. Braz. Arch.Biol. And Technol., 47 (2),
309-317.
Ritu Saini, Harnek Singh Saini and Anjali Dihiya(2017). Amylases: characteristics
and industrial applications. J. pharm.and phyt. chem.; 6(4): 1865-1871.
32
Sivaramakrishnan, S., Gangadharan, D., Nampoothiri K.M., Soccol, C.R.,
&PandeyA. (2007). “Alpha amylase production by Aspergillus oryzae
employing solid-state fermentation”. J.scient. and ind. res.; 66 (8), 621.
TallagregadaPadmavathi,Rashmiwikshit,Anushiajadhav,Ummesarah.(2017).
Partial purification and characterization of amylase enzyme under solid state
fermentation from Monascassanguineus. J.Gen. eng.and Biotechnol.
Elsevier, 15(1):95-101:doi.org/10.1016/j.jgeb.2017.02.003
33
Wajeeha Asad, Maria Asif and Sheikh AjazRasool(2011).Extracellular enzyme
production by indigenous thermophilic bacteria: partial purification and
characterization of α-amylase by bacillus sp.wa21. Pak.J.Bot; 43(2): 1045-
1052
Win T, Than WM, and Myint M. (2015). Study on the α-amylase producing activity
of isolated extreme bacteria. Proceedings of the IRES 11th Bangkok,
Thailand,
Yang CH and Liu WH. (2004). Purification and properties of maltotriose producing
α-amylase from Thermobifida fusca. Enzyme. Microb.Technol; 35 (2):254–
60.
Yoneda Y., Yoshida T., Yasuda H., Imada C., and Sako Y. A. (2013).Thermophilic,
hydrogenogenic and carboxydotrophic bacterium,
Calderihabitansmaritimus.gen.nov, from a marine sediment core of an
undersea caldera. Int.J.Sys.and Evol. Microbiol.; 63(10):3602–3608. doi:
10.1099/ijs.0.050468-0. [PubMed] [Cross Ref]
34