Cell Structure and Function Notes
Cell Structure and Function Notes
CELL
MR. LOUIE B. DASAS
UST SENIOR HIGH SCHOOL
40 μm
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Brief History
Antoine van
Leeuwenhoek
(1600s)
Invention of the
Microscope
Observed
microorganisms,
called them
“Animalcules”
Brief History
Robert Hooke, 1655
Observed empty,
honeycomb-like
boxes (Cell Wall)
Wrote the book
Micrographia
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Brief History
Robert Hooke, 1655
Introduced the
term Cell
Examined thin
slices of cork from
the bark of an oak
tree
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Brief History
Robert Brown, 1830
Identified a darkly
staining structure
at the center of
every cell
(Nucleus)
Nucleus
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Brief History
Matthias
Schleiden,
1838
All plants are
made up of
cells
Brief History
Theodor
Schwann
Animals are
made up of
cells
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Brief History
Rudolf
Virchow, 1858
Cells came
from
preexisting
cells
Cell Theory
All organisms are made up of
one or more cells.
The cell is the basic unit of life.
All cells come from other cells
all ready in existence.
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Microscopy
Three important parameters of
microscopy:
Magnification, the ratio of an
object ’ s image
size to its real size
Resolution, the measure of
the clarity of the image, or
the minimum distance of two
distinguishable points
Contrast, visible differences
in brightness between parts
of the sample
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Figure 7.2c
Electron microscopy
Super-
Light microscopy resolution
microscopy
Unaided eye
Nucleus
Length Most Smallest Small
of some Most bacteria bacteria Proteins molecules
nerve plant
Viruses
and and
Human muscle Chicken Frog Human animal Mito- Ribo-
height cells egg egg egg cells chondrion somes Lipids Atoms
Microscopy
Light microscopes can magnify effectively to
about 1,000 times the size of the actual
specimen
Various techniques enhance contrast and
enable cell components to be stained or
labeled
The resolution of standard light microscopy is
too low to study organelles, the membrane-
enclosed structures in eukaryotic cells
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Figure 7.3
50 μm
10 μm
Fluorescence Confocal Confocal (with)
10 μm (without)
1 μm Deconvolution
Figure 7.3a
Light Microscopy (LM)
50 µm
Brightfield Brightfield
(unstained specimen) (stained specimen)
Phase-contrast Differential
interference contrast
(Nomarski)
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Figure 7.3b
10 μm
Fluorescence 10 μm
Deconvolution
50 μm
Confocal (without) Confocal (with)
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Figure 7.3c
Light Microscopy (LM)
1 μm
Scanning 2 μm Transmission 2 μm
electron electron
microscopy (SEM) microscopy (TEM)
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Cell Fractionation
Cell fractionation takes cells apart and
separates the major organelles from one another
Centrifuges fractionate cells into their
component parts and determine the functions of
organelles
Figure 7.4
Homogenization
Tissue
cells
Homogenate
Centrifugation
1,000 g Supernatant poured into next tube
10 min
20,000 g
20 min
80,000 g
Pellet rich in 60 min
nuclei and
cellular debris 150,000 g
3 hr
Pellet rich in
mitochondria
(and chloroplasts)
Pellet rich in
Differential “microsomes” Pellet rich in
centrifugation ribosomes
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Figure 7.4a
Homogenization
Tissue
cells
Homogenate
Centrifugation
Figure 7.4b
80,000 g
Pellet rich in 60 min
nuclei and
cellular debris 150,000 g
3 hr
Pellet rich in
mitochondria
(and chloroplasts)
Pellet rich in
Differential “microsomes” Pellet rich in
centrifugation ribosomes
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Figure 7.5
Fimbriae
Nucleoid
Ribosomes
Plasma membrane
Bacterial Cell wall
chromosome
Glycocalyx
0.5 μm
Flagella
Figure 7.6
Inside
of cell 0.1 μm
Carbohydrate side chains
(cytoplasm)
Phospholipid
Hydrophilic
region
Hydrophobic
region
Hydrophilic
region Proteins
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Figure 7.7
Surface area increases while
As a cell increases in size, total volume remains constant
its volume grows
proportionately more than
its surface area 5
1
1
Total volume
[height × width × length 1 125 125
× number of boxes]
Surface-to-volume
(S-to-V) ratio 6 1.2 6
[surface area ÷ volume]
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Figure 7.8a
ENDOPLASMIC
RETICULUM (ER)
Nuclear
Rough ER Smooth ER
envelope
Nucleolus NUCLEUS
Flagellum
Chromatin
Centrosome
Plasma
membrane
CYTOSKELETON:
Microfilaments
Intermediate filaments
Microtubules
Ribosomes
Microvilli
Golgi apparatus
Peroxisome
Lysosome
Mitochondrion
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Figure 7.8b
Nuclear
envelope
NUCLEUS
Nucleolus
Rough ER
Chromatin
Smooth ER
Ribosomes
Mitochondrion
Peroxisome
Plasma
membrane Chloroplast
Cell wall
Plasmodesmata
Wall of adjacent cell
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Video: Chlamydomonas
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Figure 7.9
1 μm Nucleus
Nucleus
Nucleolus
Chromatin
Nuclear envelope:
Outer membrane
Inner membrane
Nuclear pore
Rough
ER
Pore
Surface of complex
nuclear envelope Ribosome
(TEM)
Close-up
0.25 μm
Chromatin
of nuclear
envelope
0.5 μm
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NUCLEUS
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Figure 7.9a
Nucleus
Nucleolus
Chromatin
Nuclear envelope:
Outer membrane
Inner membrane
Nuclear pore
Rough ER
Pore
complex
Ribosome
Close-up
of nuclear Chromatin
envelope
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Figure 7.9c
0.25 μm
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Figure 7.9d
0.5 μm
Nuclear lamina (TEM)
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Figure 7.10
Ribosomes
bound to ER
TEM showing ER
and ribosomes
Large
subunit
Small
subunit
Diagram of Computer model
a ribosome of a ribosome
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Figure 7.11
Smooth ER
Rough ER Nuclear
envelope
Smooth ER Rough ER 0.2 μm
ER lumen
Cisternae
Ribosomes Transitional
ER
Transport vesicle
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Functions of Smooth ER
The smooth ER
Synthesizes lipids
Metabolizes carbohydrates
Detoxifies drugs and poisons
Stores calcium ions
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Functions of Rough ER
The rough ER
Has bound ribosomes, which secrete glycoproteins
(proteins covalently bonded to carbohydrates)
Distributes transport vesicles, secretory proteins
surrounded by membranes
Is a membrane factory for the cell
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Figure 7.12
Golgi
apparatus
cis face
(“receiving” side of 0.1 μm
Golgi apparatus) Cisternae
trans face
(“shipping” side of TEM of Golgi apparatus
Golgi apparatus)
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Figure 7.12a
0.1 μm
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Figure 7.13
Vesicle containing
Nucleus 1 μm two damaged
1 μm
organelles
Mitochondrion
fragment
Peroxisome
fragment
Lysosome
Digestive Lysosome
enzymes Lysosome
Plasma Peroxisome
membrane Digestion
Food Mitochondrion Digestion
vacuole Vesicle
(a) Phagocytosis (b) Autophagy
Figure 7.13a
Nucleus 1 μm
Lysosome
Plasma
membrane Digestion
Food vacuole
(a) Phagocytosis
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Figure 7.13b
Vesicle containing two 1 μm
damaged organelles
Peroxisome
Mitochondrion Digestion
Vesicle
(b) Autophagy
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Figure 7.14
Central vacuole
Cytosol
Central
Nucleus vacuole
Cell wall
Chloroplast
5 μm
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TURGOR PRESSURE
or turgidity is the main pressure of
the cell contents against the cell
wall in plant cells and bacteria
cells, determined by the water
content of the vacuole, resulting
from osmotic pressure, i.e. the
hydrostatic pressure produced by a
solution in a space divided by a
semipermeable membrane due to a
differential in the concentration of
solute.
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Figure 7.15
Nucleus
Nuclear
envelope
Rough ER
Smooth ER
cis Golgi
Plasma
membrane
trans Golgi
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Figure 7.16
Endoplasmic Nucleus
reticulum
Nuclear
envelope Engulfing of oxygen-
using nonphotosynthetic
prokaryote, which
becomes a mitochondrion
Ancestor of
eukaryotic cells (host cell)
Mitochondrion
Engulfing of
photosynthetic
prokaryote Chloroplast
At least
Mitochondrion one cell
Nonphotosynthetic
eukaryote
Photosynthetic eukaryote
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Figure 7.17a
Mitochondrion
Intermembrane space
Outer
membrane
DNA
Inner
Free membrane
ribosomes
in the Cristae
mitochondrial
matrix Matrix
0.1 μm
(a) Diagram and TEM of mitochondrion
Figure 7.17b
10 μm
Mitochondria
Mitochondrial
DNA
Nuclear DNA
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Ribosomes 50 μm
Inner and outer
membranes
Granum
Chloroplasts
DNA
(red)
Thylakoid Intermembrane space 1 μm
(a) Diagram and TEM of chloroplast (b) Chloroplasts in an algal
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cell
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Peroxisomes: Oxidation
Peroxisomes are specialized metabolic
compartments bounded by a single membrane
Peroxisomes produce hydrogen peroxide and convert
it to water
Peroxisome
How peroxisomes Mitochon-
are related to drion
other organelles is
still unknown!
Chloroplasts
1 μm
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PLASTIDS
Specialized organelles in plants and algae
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pigment
storage
chromo
storage
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chromo
leuco
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Figure 7.21
Vesicle
ATP
Receptor for
motor protein
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25 nm
α β Tubulin dimer
Actin subunit
7 nm
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Keratin proteins
Fibrous subunit (keratins
coiled together)
8–12 nm
Microtubules
Microtubules are hollow rods about 25 nm in
diameter and about 200 nm to 25 microns long
Microtubules are constructed of dimers of tubulin
Functions of microtubules:
Shaping the cell
Guiding movement of organelles
Separating chromosomes during cell division
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Figure 7.22a
0.25 μm
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Direction of swimming
5 μm
Power Recovery
stroke stroke
15 μm
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Figure 7.24b
Outer microtubule Plasma
0.1 μm doublet membrane
Motor proteins
(dyneins)
Central
microtubule
Radial spoke
Cross-linking
(b) Cross section of protein between
motile cilium outer doublets
Figure 7.24c
0.1 μm
Triplet
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Figure 7.25
0.25 µm
Microvillus
Plasma membrane
Microfilaments (actin
filaments)
Intermediate filaments
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Figure 7.26a
Muscle cell
0.5 μm
Actin
filament
Myosin
filament
Myosin
head
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Figure 7.26b
Inner cytoplasm
(more fluid)
Extending
pseudopodium
(b) Amoeboid movement
Figure 7.26c
30 μm
Organelles
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Intermediate Filaments
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Plasmodesmata
Secondary
cell wall
Primary
cell wall
Middle
lamella
1 μm
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Figure 7.28
Collagen Polysaccharide
molecule
Carbo-
hydrates
Fibronectin Core
protein
Plasma
membrane
Proteoglycan
molecule
Microfilaments
Integrins
CYTOPLASM
Figure 7.28a
Polysaccharide
molecule
Carbo-
hydrates
Core
protein
Proteoglycan
molecule
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Cell Junctions
Neighboring cells in tissues, organs, or organ
systems often adhere, interact, and communicate
through direct physical contact
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Interior
of cell
Interior
of adja-
cent cell
0.5 μm Plasmodesmata Plasma membranes
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TEM
0.5 μm
Tight junction
Intermediate
filaments
Desmosome
Desmosome
(TEM) 1 μm
Gap
junction
Ions or small
molecules
TEM
Extracellular
matrix
Plasma membranes Space 0.1 μm
of adjacent cells between cells Gap junctions
FigureTight
7.30a
junctions
prevent fluid from
moving across a
layer of cells
Tight
junction
Intermediate
filaments
Desmosome
Gap
junction
Plasma
membranes of Extracellular
adjacent cells matrix
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Figure 7.30b
Tight
junction
TEM
0.5 μm
Figure 7.30c
Desmosome
(TEM) 1 μm
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Figure 7.30d
TEM
0.1 μm
Gap junction
Animation: Desmosomes
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Macrophage
Bacteria
Filopodium (extension
of the macrophage)
engulfing bacteria
10 μm
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Figure 7.32a
Chloroplast
Membrane Photo-
Mitochondrion
proteins synthesis
Cellular
respiration
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Figure 7.32b
Nucleus
Transcription Nuclear
pore
Endoplasmic
Nuclear reticulum
envelope Translation
Cytoskeleton
Scale within cell
Motor proteins 25 nm
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