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MCAT Biochem

The document discusses carbohydrates, including their structure, classification, nomenclature, and functions. Specifically: 1) Carbohydrates have the formula Cn(H2O)n and contain carbon, hydrogen, and oxygen. They include monosaccharides, disaccharides, and polysaccharides. 2) Monosaccharides are the simplest carbohydrate units and include common sugars like glucose, fructose, and galactose. They can form cyclic structures through intramolecular reactions. 3) Carbohydrates serve important functions like energy storage, forming nucleic acid structures, comprising cell walls, and modifying proteins and lipids through glycosylation.

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Meghan Pelehac
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0% found this document useful (0 votes)
140 views9 pages

MCAT Biochem

The document discusses carbohydrates, including their structure, classification, nomenclature, and functions. Specifically: 1) Carbohydrates have the formula Cn(H2O)n and contain carbon, hydrogen, and oxygen. They include monosaccharides, disaccharides, and polysaccharides. 2) Monosaccharides are the simplest carbohydrate units and include common sugars like glucose, fructose, and galactose. They can form cyclic structures through intramolecular reactions. 3) Carbohydrates serve important functions like energy storage, forming nucleic acid structures, comprising cell walls, and modifying proteins and lipids through glycosylation.

Uploaded by

Meghan Pelehac
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© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
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Download as DOCX, PDF, TXT or read online on Scribd
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CARBOHYDRATES  Cn(H2O)  1:2:1 (1C: 2H: 1O)

** Look for functional groups: 1) Aldehydes 2) Ketones 3) Alcohols

I. Nomenclature AND Classification, Common names:


** Named based on:
 Length of carbon chain
 Functional groups present on sugar
 Stereochemistry of sugar

 What 3 things must a molecule have to be classified as carbohydrate?


o 1) 3-carbon backbone
o 2) Aldehyde OR ketone group
o 3) @ least 2 hydroxyl groups


 Hydrates of carbon  can be named according to # of carbons it contains
o Cn = # of carbon atoms w/ matching H2Os

 Carbohydrate = sugars, monosaccharides, disaccharides, polysaccharides

 Carbonyl carbon = MOST oxidized = ALWAYS have lowest possible #

 MONOSACCHARIDES= single/simplest carbohydrate unit


o Aka = simple sugar
 SAME kind of molecule
 Simplest monosaccharides  trioses
o Common names: triose (3 carbons), tetrose (4 carbons), pentose (5 carbons),
hexose (6 carbons)
o -ose = denotes sugar
 Aldose = aldehyde sugar (aldehyde group = most oxidized functional
group)
 Ketose = ketone sugar (ketone group = most oxidized functional group)
o Include:
 Glucose
 Fructose
 Galactose
 Ribose
 Xylose
 Disaccharides = 2 sugars bound together
 Polysaccharides = long sugar chains for glucose storage (i.e. glycogen in animals, starch
in plants)
 Absolute configuration:
o Describes spatial arrangement of atoms OR groups around chiral molecule
o Assign priority to substituents of chiral carbon
 HIGHER the atomic #  HIGHER priority
 Orient the molecule with the LOWEST priority substituent in the back
 CLOCKWISE = R
 COUNTERCLOCKWISE = S

 Basic structure of monosaccharide => GLYCERALDEHYDE


o Polyhydroxylated aldehyde = aldose aldehyde sugar

 Simplest aldose (Aldotriose)

 Cyclic structure:
o Monosaccharides can undergo INTRAmolecular rxns to form RING structure
o Cyclic rings = stable in solution and can form 2 types of rings:
 1) 6-membered rings  6 carbons in ring = PYRANOSE
 2) 5-membered rings  5 carbons in ring = FURANOSE
 Glycosidic linkages:
o Covalent bonds B/W monosaccharides AND alcohols
o Aldehyde carbon  participate in glycosidic linkages
 Sugars acting as substituents via linkage => Glycosyl residues
o When alcohol is another monosaccharide, produces a disaccharide
 Examples:
 Sucrose
 Lactose
 Maltose
 Cellobiose
o Linkage b/w C1 on 1st sugar AND C2 on 2nd sugar
=> 1,2 linkage
o Linkage b/w C1 on 1st sugar AND C4 on 2nd sugar
=> 1,4 linkage
o Linkage b/w C1 on 1st sugar AND C6 on 2nd sugar
=> 1,6 linkage
 May also be classified as alpha OR beta:
o Hydroxyl group on C1 => oriented  UP = Beta (Birds fly in sky)
o Hydroxyl group on C1 => oriented  DOWN = Alpha (Fish swim in sea Down
under)
 PREFIX:
o Deoxy = has a -H in place of -OH @ certain position
o D/L = absolute configuration = assigned based on chirality of carbon atom
furthest from carbonyl group
o α/β = Anomeric configuration
 SUFFIX:
o ALL sugars end in -ose

FUNCTION: Role of carbohydrates and sugars


 1) Energy source/energy means energy stores (glycogen)
o Main energy source = Glucose
o Production of fats which are also used as energy source
o Energy stores => triglycerides
o Where do we get our sugar molecules come from?
 Produced by plants  capture energy stored in light  transforms energy
into chemical bonds w/in sugar molecule
 In sun have nuclear rxns taking place and release energy that is stored in
EM waves that propagate through space and makes way to plants
 Plants take CO2 and H2O and use energy stored in light to produce sugar
molecule + O2 (use in ETC in process of aerobic cellular respiration)
 Ingest carbohydrates produced by plants  break down carbohydrates into
individual monomer sugars (if not glucose molecule then transform into
glucose molecule)
 If have too many  glucose can be stored as glycogen
 Energy produced in nuclear rxn is stored in chemical bonds w/in sugar
molecules  ingest sugar molecules – take same energy from sun and
store in ATP molecules and use ATP to carry out processes
o But do NOT have as high concentration of energy per gram as lipids b/w do NOT
have as high concentration of C-H bonds

 Carbohydrates are produced by plants  ingested & broken down into individual
monomer sugars

 2) Formation of structural framework of Nucleic Acids


=> DNA & RNA:
o ATP contains a ribose sugar
o RNA & DNA: Nucleic Acids
 Store genetic information
 RNA = Ribose:  ribo-nucleic acid
o Ribo = ribose sugar = pentose sugar
o Sugar links nitrogenous base to
phosphate group
 DNA = DEOXYribose  deoxy-ribo-
nucleic acid
o 2nd C = NO hydroxyl group
o Deoxy = 2’H (vs. 2’-OH in RNA)
o Acid = phosphate group gives it acidity

 3) Cell walls of bacteria => Structural elements


o Bacteria
 = peptidoglycan OR murein
o Plants
 = cellulose
o Animals
 = chitin

 4) Lipid AND Protein Modifications:


o Linked to many proteins AND lipids
 Cell-cell communication AND interactions B/W cells and other elements in
cell environment
o Use sugar to modify lipids and proteins  diversify the capabilities and functionality
of proteins and lipids by 
 Attaching sugar components onto macromolecules  by combining sugars
and proteins or sugars and lipids  increase capabilities of these
 Ex: Tissue factor (coagulation cascade)  is a glycoprotein that
interacts w/ other molecules = initiate formation of blood clot (intrinsic
pathway of coagulation cascade)
o Sugars make up components of cell walls

MODIFICATION OF CARBOHYDRATES:
 Monosaccharides may be modified via addition of groups

 2 modifications of sugars:

o 1) PHOSPHORYLATION of Sugars:
 When cells uptake sugar molecules  the 1st step in glucose metabolism is
to phosphorylate glucose
 Whenever a system in nature contains charge  means its energy =
HIGHER = LESS stable = MORE reactive
 By phosphorylating glucose molecule  G-6-P => INCREASE
reactivity of glucose molecule to be able to undergo further
processes
 INCREASE polarity of glucose molecule
 Phosphorylated glucose contains HIGHR charge = MORE polar
 MORE likely to spontaneously leave the cell
o b/c around the cell have cell membrane that contains
nonpolar lipid molecules, so HIGHLY polar glucose-6-
phosphate CANNOT spontaneously leave the cell b/c it
cannot pass across nonpolar bilayer membrane
surrounding the cell
 st
1 step of glucose metabolism  modifying glucose by ADDING phosphate group
o PHOSPHORYLATION of glucose gives => Net (-) charge => becomes anion
o Do this for 2 reasons:
o 2) Glycosidation w/ Alcohols:

NUCLEOTIDES:
 Building blocks  and involved in cell’s use of energy

 Made up of 3 components:
o 1) 5 carbon (pentose) sugar
o 2) Nitrogenous base
o 3) Phosphate group

EPIMERS vs. ANOMERS:


o Epimers
o Differ in absolute configuration @ only 1 C  R or S
o Anomers
o Differ in configuration @ hemiacetal/acetal = anomeric C
 Note: Conversion B/W anomers = MUTAROTATION

GLUCOSE
 Carbon backbone = makes it organic

CARBOHYDRATES
 POLAR molecules
 Dissolve in polar solvents 
like H2O
 Form hydrogen bonds w/ H2O
molecules
 HYDROOHILIC
o Mix w/ H2O
 2 functional groups:
o 1) Aldehyde
o 2) Ketone

1) ALDEHYDE:
 ALCOHOL =
o ANY organic compound in which hydroxyl functional group OH = bound to
saturated carbon atom
o ALL have suffix -ol
o Carbon
 => double bonded to oxygen
 => single bonded to hydrogen
o Formed by:
 Oxidation of alcohols

2) KETONE:
 Organic compound R1 and R2 can be variety of carbon containing
substituents
o Carbonyl “sandwiched” B/W 2 radical groups (R1 & R2)

 Carbohydrates are polyhydroxy aldehydes OR polyhydroxy


ketones
 Car being hydrated
o 3 girls = 3 atoms  C, H, & O
 OH my god! What a wet (H2O)  carbohydrates = hydrophilic
o Car has 4 wheels
 Carbohydrate = 4 calories/g  amt. energy in 1 g of carbohydrate
 Hose  suffix -ose
o Used in mono OR dia – saccharides
CARBOHYDRATES Right hand finger trick:
.,

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