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Week59 PDF
Source www.techno-preneur.net/timeis/technology/MaysciTech/DairyProduct.html,
last accessed on 25 July 2005
Classification of micro-organisms
Micro-organisms can be broadly classified into plants, animals, and higher and
lower protista. Micro-organisms belonging to the plant and animal kingdoms
are multicellular, whereas those under protista can either be unicellular or
multicellular. Microbes, which are of importance to waste treatment, are
protists such as algae, protozoa, fungi, blue-green algae, and bacteria. These
can be further classified as eukaryotic cells containing well-defined nucleus
with a membrane or prokaryotic cells without a nuclear membrane. Bacteria
and blue green algae are prokaryotic, whereas the algae, protozoa, and fungi
are eukaryotic.
Bacteria can be classified on the basis of their shape and can be cylindri-
cal, rod-shaped, spherical, and helical. In waste utilization, various groups
of micro-organisms act on the substrate to be treated by one of the four
processes, namely, aerobic, anoxic, anaerobic, and a combination of the
aerobic/anoxic or anaerobic processes. Each process can be further sub-
divided into attached or suspended growth or a combination of both. The
biochemical action of the microbes by any of the above routes results in the
degradation of carbonaceous and nitrogenous matter.
Classification of micro-organisms can also be based on the use of carbon
for growth. Autotrophic organisms are those that utilize carbon dioxide as a
source of carbon, while organisms utilizing organic carbon are known as
heterotrophic. Autotrophic organisms are further classified into photosynthetic
or chemosynthetic, depending on their source of energy, that is, the sun or
inorganic oxidation–reduction reactions.
In addition to classification based on source of energy and carbon, the
oxygen requirement for growth leads to another category of classification of
micro-organisms, namely aerobic (those that require oxygen), anaerobic (those
that can survive in the absence of oxygen), and facultative (organisms that
can exist under both aerobic and anaerobic conditions). Organisms that re-
quire the presence of oxygen for their metabolism are also known as obligate
aerobes. Almost all animals, fungi, and several bacteria are obligate aerobes.
Organisms for which the presence of molecular oxygen is toxic are known as
obligate anaerobes. These are involved in acid fermentations, acetogenesis,
and methanogenesis. Facultative anaerobes can use available oxygen and also
other electron acceptors such as nitrate in absence of oxygen. Yeast and hu-
man cells are examples of facultative micro-organisms. Table 14.3 lists the
organisms that are obligate aerobes, obligate anaerobes, and facultative
anaerobes.
where [E] is the enzyme, [S] the substrate, [E][S] the enzyme–substrate
complex, and [P] is the product.
The activity of enzymes depends on the substrate, its concentration,
pH, and temperature. The optimum pH for enzymatic activity is 7 and the
optimum temperature is 35–40 ºC. At higher temperatures, enzymes get
denatured. The action of enzymes can be explained in a simplified manner by
the lock-and-key mechanism (Figure 14.2). Each enzyme is specific to a
specific substrate and has an active site where the substrate binds and
reaction occurs. The conversion of a substrate into a product can be a single-
step or a multi-step reaction, catalysed by a series of enzymes. For example,
rennet, an enzyme preparation containing chymosin, is used to catalyse
changes in milk proteins for gel formation during preparation of cheese.
Metabolic pathways of various substrate conversions in a cell are very complex
due to multiple reactions. For example, formation of ethanol from pyruvate in
yeast and other micro-organisms is catalysed by two types of enzymes. In the
first step, pyruvate is converted into acetaldehyde, which is catalysed by
pyruvate decarboxylase. The second step is the reduction of acetaldehyde to
ethanol, catalysed by alcohol dehydrogenase.
Acetaldehyde + NADH + H →
+ +
←Ethanol + NAD
The glycolytic pathway for conversion of glucose into pyruvate along with
energy production in the form of ATP is catalysed by different enzymes for each
step (Stryer 1986; Figure 14.3). For details on glycolysis, Krebs’ cycle and other
biochemical path ways, any standard book on biochemistry (e.g. Stryer 1986)
can be referred. Enzymatic activity is maximum at optimum temperature
and pH. An acidic or alkaline pH affects the shape of enzyme molecules
and inactivates the site at which reaction occurs (Figure 14.4).
Mixed cultures
Mixed cultures are microbial cultures, involving two or more micro-organ-
isms. The bacterial consortium used in the biological waste treatment is a
typical example of mixed cultures. This is a complex system as each micro-
organism has a distinct growth pattern depending on the external
parameters like pH, temperature, substrate, availability of oxygen, and
presence of other micro-organisms. Growth rates of different micro-organ-
isms in a mixture culture are shown in Figure 14.7(b). Growth of the mixed
cultures in batch systems simultaneously follows the three steps: oxidation
of organic matter, auto-oxidation of cells for energy, and growth of cells.
These three processes are depicted using the terms COHNS for organic
matter and C5H7NO2 to represnet cell tissue as follows (Metcalf and Eddy
1993).
Oxidation
COHNS + O2 + bacteria → CO2 + NH3 + other end products + energy
Synthesis
COHNS + O2 + bacteria + energy → C5H7NO2 (New cell tissue)
Endogenous rrespir
espiration (aut
espiration o-o
(auto-o xidation)
o-oxidation)
C5H7NO2 + 5O2 → 5CO2 + NH3 + 2H2O + energy
Example 1
Estimate the COD (chemical oxygen demand) of (i) glucose, (ii) cell biomass,
(iii) methane, and (iv) sewage sludge with the following composition. Carbon
(31.1%), hydrogen (4.2%), oxygen (24.3%), nitrogen (3.3%), and sulphur (1.1%).
Solution
(i) Glucose
A single molecule of glucose requires 6 moles of oxygen to break down
into carbon dioxide and water. The complete oxidation of glucose is
represented by the following equation.
C6H12O6 + 6O2 → 6CO2 + 6H2O
(iii) Methane
The complete oxidation of methane is represented as
CH4 + 2O2 → CO2 + 2H2O
The COD of methane, which is the amount of oxygen required for oxi-
dation of each mole of methane = (2 × 32)/16 = 4 g O2/g of methane
Example 2
Estimate the theoretical methane yield for 1 g COD of organic matter.
Solution
Density of methane is 0.7167 g/litre.
Hence, 1 g of methane will occupy a volume of 1.4 litres.
As the COD of methane is 4 g [Example 1 (iii)], 1.4 litres of methane will be
equivalent to 4 g of COD.
810 • Renewable energy engineering and technology
...(14.2)
where µmax is the maximum specific growth rate (g new cells/g cells/day), S is
the limiting substrate concentration (g/m3), and ks is the half-velocity constant
(g/m3).
When µ = µmax /2
...(14.3)
Rearranging the equation, we get
Biochemical methods of conversion • 811
Or
ks = S½
(mixed)
where S0 is the influent substrate concentration and k is a dimensionless ki-
netic parameter.
(mixed)
Substituting for µ from Equation 14.2 in Equation 14.1, the overall rate
expression can be represented as
...(14.4)
...(14.6)
The term (µmax/Y) is also denoted k, the maximum specific substrate uti-
lization rate. The decay of cells during the endogenous or death phase is given
as
...(14.7)
where rd is the rate of biomass decay (g VSS/m /day) and kd is the decay con-
3
stant (g VSS/g VSS/day). The net rate of increase in biomass concentration will
thus be
...(14.8)
...(14.9)
...(14.10)
or
...(14.11)
The VSS in any bioreactor includes the cell biomass, lysed cells, or cell
debris due to the decay of the cells, and non-biodegradable VSS present in the
feed or substrate.
Effect of temperature
Temperature affects the biological reactions through its influence on
microbial metabolism, gas transfer rates, and settleability of solids. The
microbial metabolic reactions are catalysed by enzymes that are influenced
by temperature as explained earlier. The gas transfer rates are influenced
by temperature due to its effect on diffusivity and viscosity of the media.
Temperature also affects the settleability of solids by causing deflocculation
of sludge.
The effect of temperature on reaction rate can be derived from the Vant
Hoff–Arrhenius relation
...(14.12)
...(14.13)
where k2 is the rate constant at temperature T2 and k1 is the rate constant at T1.
As the waste treatment reaction occurs at ambient temperature, the
term E/RT1T2 can be considered constant C. This transforms Equation 14.13
into
...(14.14)
...(14.15)
814 • Renewable energy engineering and technology
where η = eC ...(14.16)
Choosing a reference temperature of 20 ºC we get
...(14.17)
where kT is the reaction rate constant at a temperature T ºC, k20 is the reaction
rate constant at a temperature 20 ºC, and η is the temperature activity coef-
ficient.
Effect of nutrients
Certain inorganic elements are required for growth, including nitrogen,
sulphur, phosphorus, magnesium, calcium, iron, sodium, and chlorine. Micro-
nutrients such as zinc, manganese, molybdenum, selenium, cobalt, and nickel,
and growth promoters, namely amino acids and vitamins, may also be required
in certain cases.
A note on terminology
As mentioned earlier, substrate concentration is quantified as BOD and
COD in waste waters. But as waste waters contain varieties of substrates
some more terms are used to quantify, such as biodegradable COD (bCOD)
or biodegradable soluble COD (bs COD). The waste waters contain colloidal
and particulate matter, part of which may be biodegradable. Bacteria cannot
consume the particulate substrates directly. These are first hydrolysed enzy-
matically to convert into soluble substrates. The bCOD can be a measure of
particulate substrates also.
The bacterial concentration, also termed often as active biomass, is com-
monly measured as TSS (total suspended solids) and VSS (volatile suspended
solids). In waste water treatment plants in which part of the sludge produced
is recycled, the term MLVSS (mixed liquor volatile suspended solids) is used to
define biomass concentration in the reactor input. The solids consist of bacte-
ria, nbVSS (nonbiodegradable volatile suspended solids) and iTSS (inert total
suspended solids).
The biomass yield Y can be estimated from stoichiometry considera-
tions. For example, if we assume that the soluble substrate can be represented
as glucose (C6H12O6), and bacterial cells can be represented as C5H7NO2, a stoi-
chiometric equation can be written as
3C6H12O6 + 8O2 + 2NH3 → 2C5H7NO2 + 8CO2 + 14H2O
Biochemical methods of conversion • 815
In the above, 113 and 180 are the molecular weights of bacterial cells and
glucose respectively.
The COD of glucose can be determined by the oxidation reaction
The actual yield in any given biological treatment process will be less
than the figures given above.
Biomass yield can also be estimated from considerations of bioenergetics
(see Metcalf and Eddy 2003).
Batch reactor
It is a simple vessel, with continuous mixing of contents of the reactor with
no inflow or outflow of materials. The H/D (height/diameter) ratio is
generally kept at 1:3 (Figure 14.10).