Anatomi Crab
Anatomi Crab
Anatomi Crab
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University of Bergen
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Abstract - Blue swimming crab (Portunus pelagicus) was the economic and ecological important species in Vietnam, and
potential subject for aquaculture as well. More than 400 crab individuals were collected along the Vietnamese coastline, and
examined for ectosymbiotic crustacean. High diversity of 7 species have been reported, and 7 probably new for science. The
significant differences were detected between the infestation status of common occurring symbionts against the crab host
distribution (north, cemter, and south), sexes, and size groups. Symbiotic crustacean occupied specific niche(s) on crab body.
Molecular phylogeny supported the separation of 2 distinct lineages represented for two subclass (Thecostraca and
Copepoda. Further studies need to be conducted for new species description.
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
Phu Quoc Island and Rach Gia - Kien Giang in he PCR reactions were performed using a total volume
South. The crabs were transported alive in aerated sea of 50 µl with components as following concentration:
water to the laboratory where they were kept in 10 µL of DreamTaq (Thermo Fisher Scientific) buffer
aquaria until dissected. 10X, 2 µL dNTP (10 mM), 2 µL each primer (10
For each crab, the sex, size (carapace width (CW) and mM), 1.25 unit of DreamTaq polymerase (5U/µl), 5
body weight (BW)) were recorded. Carapace width of µl DNA template and distilled water to the final
80 mm roughly corresponds to the size-at-maturity volume. Amplification was implemented using the
for P. pelagicus in Vietnam (Ha et al., 2014). To following PCR profile: a preliminary denaturation at
examine size differences in the levels of infestation, 94 °C for 3 minutes (min), followed by 35 cycles of
the crabs were subdivided into four groups: CW = < 94 °C for 45 seconds (s), annealing for 45 s (for 28S
80, 80 – 99, 100 – 119, and > 120 mm. rDNA, CO1 mtDNA gene at 56 °C, 42 °C,
Crabs were examined externally for symbiosis respectively), and then 72 °C for 45 s. This was
crustaceans. The carapace and abdomen of each crab followed by a final extension period at 72 °C for 7
was lifted off the body for dissection. For infected min before the samples were cooled to 4 °C. PCR
sites examination, the crab individuals were divided products were run on 1.5% agarose gel for
into 5 separate parts: (1) Carapace, (2) Limb confirmation of equal length against an appropriate
(maxilliped, chelliped, and swimming legs, (3) size markers. The PCR products were purified using
Abdomen, including egg clutches (if any), (4) Mouth DNA purification kits (Promega) and pre-sequenced
part, and (5) Gill. Each part was separated into petri using dye– labels dideoxy terminator (Big Dye
dishes containing clean seawater for inspection by the Terminator 3.1, Applied Biosystems) with the same
naked eye and stereoscope (Olimpus SZX9). primer as the PCR reactions at the following
Symbiosis crustacean species intended as whole- temperatures: 96 °C for 30 s, 50 °C for 30 s and 60
mounts were transferred to a vial of 70% alcohol, and °C for 4 min. Sequences of both strands were
those for DNA analysis were preserved in 95% generated on an ABI PRISM 3100 Genetic Analyzer
EtOH, and stored at -20°C. Symbiosis crustaceans (Applied Biosystems) using the amplification
were identified using various keys and species primers.
description following (Shields, 1992), (Shields and Sequence contigs were assembled using the Geneious
Wood, 1993) (Shields and Overstreet, 2003), (Jeffries Pro 5.5.7 (Kearse et al., 2012). The resulting
et al., 2005). sequences were confirmed by the Basic Local
We test the difference between crab distribution Alignment Search Tool (BLAST,
(geographical locations as north, center, and south), https://blast.ncbi.nlm.nih.gov/Blast.cgi). The
crab sex (male and female), and size group (4 groups) sequences were aligned, analyzed using BioEdit
against prevalence and mean intensity (defined in 7.0.5.3 (Hall, 1999) and submitted to GenBank.
(Margolis et al., 1982) and (Rózsa et al., 2000) of Information on genes application, and Genbank
each found symbiosis crustacean species using a one- accession numbers were presented in Table 1.
way ANOVA performed with Tukey’s post hoc tests. Phylogenetic trees were constructed using obtained
Data were tested for nominal distribution, and those 28S rDNA and COI mtDNA of collected symbiotic
of non-nominal distribution were log-transformed to crustaceans. Xia test was implemented for each
reduce differences in the variances between groups. sequence set in DAMBE 6.4.101 (Xia, 2013) to check
All statistical analyses were performed using using for substitution oversaturation based on the concept
SPSS free trial ver. 24.0 (IBM Corp. Released 2016. of entropy information theory. According to
IBM SPSS Statistics for Windows, Version 24.0. (Gontcharov et al., 2004), combined gene analysis
Armonk, NY: IBM Corp.). enhanced phylogenetic resolution, 2 current
sequence sets (7 sequences from each gene) were
2.2. Phylogenetic relationships combined with 17 available Genbank sequences
DNA was extracted from individual of each collected (Table 1, lacking genes marked as x) using Geneious
symbiont species using DNAeasy Tissue Extraction Pro 5.5.7 (Kearse et al., 2012). An incongruence-
Kit (Qiagen) in accordance with the manufacturer’s length difference (ILD) test (Barker and Lutzoni,
instructions. 28S rDNA and COI (Cytochrome c 2002) was conducted in PAUP*4.0b10 (Swofford,
oxidase subunit I) mitochondrial DNA were 2002) with 1000 randomized replicates to estimate
amplified using primer LSU 5 and 1500R (Olson et any difference in phylogenetic signal among the
al., 2003), and LCO1490 and HCO2198 (Folmer et different molecular sections.
al., 1994), respectively.
Table 1: Species list, sampling localities, Genbank accession numbers for all sequences of symbiotic crustaceans used in the
phylogenetic analysis (*sequences from Genbank. x sequences absent, W waiting Accession number)
Subclass Supperorder Order/Suboder Family Species COI mtDNA 28S rRNA
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
Phylogenetic trees were constructed using 3 number of trees to be discarded in the ‘‘burn in’’ and
approaches, i.e., Maximum likelihood (ML), a final 50% majority-rule consensus
Maximum parsimony (MP) and Bayesian inference tree was constructed from the remaining trees.
(BI). Prior to ML and BI analyses, best-fit models of Numbers at the interior branches of the majority-rule
nucleotide substitution were selected by the Akaike consensus tree represent posterior probability (PP).
Information Criterion as implemented by Modeltest
3.7 (Posada and Crandall, 1998) and MrModeltest 2.2 III. RESULTS AND DISCUSSION
(Nylander, 2004). ML analyses were conducted using
the MEGA 6 (Tamura et al., 2013). The support of 3.1. Crustacean symbionts diversity and infection
clades was tested by the bootstrap method containing In total, 7 symbiotic crustaceans (Table 2, Fig. 1)
1000 replicates. MP analyses were conducted using were found occupying P. pelagicus distributed along
PAUP*4.0b10 (Swofford, 2002) . Trees were found Vietnamese coastline. Among that, Balanomorpha
by 1,000 replicate heuristic searches using the tree- sp., and Chelonibia cf. testudinaria were probably
bisection reconnection (TBR) branch-swapping new for science. The most common crustacean
algorithm, with 10 starting trees obtained by stepwise symbionts was the peduncle barnacle Octolasmis
addition. BI analyses were conducted in MrBayes angulata (Prevalence 75.57%, Mean intensity
3.2.6 (Huelsenbeck and Ronquist, 2001) 57.26±93.06), Its two congeners (O. neptuni and O.
under the selected best-fit models and parameters. warwickii), closed related species Temnaspis
Four chains were used and the analysis was run for tridens (Young, 2001) and an acorn barnacle
1 million generations, with the sampling frequency of Chelonibia cf. testudinaria were found to have
100. Each analysis was repeated twice to check moderate abundance (>10%), while Balanomorpha
for similarity of the likelihood plateau. Additionally, sp., and egg eating copepod (Choniosphaera indica)
parameter values were evaluated for occurred with low prevalence (0.21%) (Table 2).
convergence throughout the run by using the ‘‘sump’’
command in MrBayes and by examining Octolasmis spp. showed the variety of preferred
results in Tracer 1.3 (Drummond et al., 2005). Plots infected sites. O. warwickii infected most of the body
from Tracer were used to determine the appropriate parts of the crabs, except for the gills, while its two
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
congeners do not found appear on the carapace. T. groups as only 2 species found on small crab (<80
tridens was found in most of body parts, and absent mm), 6 in middle sizes, and 7 species in large crabs
from the carapace. (Table 2, Fig. 2). Chelonibia cf. (>120 mm) (Table 3).
testudinaria occupied the outer surface (carapace and
limb), and C. indica exclusively on the abdomen of Five of seven species showed the significant
female crab (Table 2, Fig. 2). difference in prevalence and/or mean intensity among
Geographically, 6 species were discovered on P. host crab distribution (north, center, and south).
pelagicus in each sampling sites with Chelonibia cf. Levels of infestation was also depended on crab
testudinari occurring both in the north and south, sexes. Two Octolasmis and 1 Temnaspis species
while Balanomorpha sp. specify in the north and presented the significantly distinction in the
center. Five species (4 stallked and 1 acorn barnacle infestation rate. Prevalence and mean intensity
species) are commonly detected in both sexes, increased with crab size. Of which, 2 species showed
Balanomorpha sp. and C. indica found only in female significant different in 4 size groups, and 5 species in
crabs. Species numbers increased with crab size three size groups (Table 3).
Table 2: Infestation status of symbiosis crustacean species found on the blue swimming crabs, Portunus pelagicus (N= 479) along
Vietnamese coastline. Infection sites were marked as (1) Carapace, (2) Limb, (3) Abdomen, (4) Mouth part, and (5) Gill. Prevalences
and mean intensities (±SD) following P. pelagicus distribution (north, center, and south) and sex (male and female). Different letters
(in bold) mean prevalence and mean intensity was significantly different (one way ANOVA; P < 0.05).
Prevalence (P) Crab populations (P/MI) Crab sex (P/MI)
Infection
Name of species Mean Intensity
sites North Center South Male Female
MI)
Octolasmis 75.57 (2), (3), 82.55 72.00 73.08 77.12 74.07
angulata 57.26±93.06 (5) 65.63y±73.2 63.47y±16.75 37.01x±71.47 35.23x±46.46 79.53y±19.37
11.48 (2), (3), 9.00b 27.69c 13.98 9.05
O. neptuni 0.67a/2.00x
21.55±30.26 (5) 6.61x±5.56 29.56y±35.1 15.48±17.80 30.64±40.94
b b a a
15.45 (1), (2), 16.78 25.5 1.54 9.75 20.99b
O. warwickii x y x
23±31.12 (3), (4) 4.92 ±7.94 33.40 ±34.92 4.5 ±4.95 17.65±22.47 25.41±4.04
Temnaspis 19.00 (2), (3), 26.85b 21.00b 6.92a 15.25a 22.63b
tridens 7.95±8.49 (4), (5) 8.18±7.82 6.26±5.17 14.78±17.58 5.61±4.87 9.47±9.89
Chelonibia cf. 14.82 45.64b 2.31a 13.98 15.64
(1)
testudinari 9.32±9.96 9.68y± 0.3 1.33x±0.58 10.03±0.26 8.71±9.64
Balanomorpha 4.03
0.21*/6 (3) 0.50/6.00 0.41/6.00
sp. 18.67±16.90
Choniosphaera 2.09 1.50 0.77 4.12
(1)
indica 20.90±4.97 19.33±7.36 39.00 20.9±14.94
Species number 7 6 6 6 5 7
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
phylogeny turned out to be sister to C. carella. parasite/symbiont differences between sexed mostly
Sequence differences compared to C. testudinaria/C. due to low growth rate (in female), distinct feeding
pandula (4.4 and 5.6% respectively), as well as C. and migration as well as Sacullina infection. Molting
carella (3.6%) (data not showed) can be seen as behavior was also the vital factor relating to the
three distinct species. abundant of symbiotic species. Additionally,
Considering the host features (distribution, sexes, and Seasonal fluctuations in species composition are also
size group), we found the significant differences in frequently observed in blue swimming crabs ((Jeffries
most common occurring symbionts. This has been et al., 2005). However, small differences in
documented in previous studies on various geographic distribution (such as case studies at the
crustaceans (Dvoretsky, 2012), (Shields and coast of Vietnam) are rarely detected.
Overstreet, 2003), (Dvoretsky and Dvoretsky, 2010), Infection sites of symbiotic crustaceans was also
(Ekanem et al., 2013) and swimmer crabs (Weng, recorded in the same way as previous studies
1987. Shield (1992)). Shield (1992) explained the ((Gaddes and Sumpton, 2004; Yusa et al., 2012)
Table 3: Prevalences and mean intensities (±SD) of symbiosis crustaceans following P. pelagicus size groups, Different letters (in
bold) mean prevalence and mean intensity was significantly different (one way ANOVA; P < 0.05).
Fig. 1. Line drawing of symbiotic crustaceans on P. pelagicus A Balanomorpha sp , B. Chelonibia cf. testudinaria , C. Choniosphaera
indica, D. Temnaspis tridens, E Octolasmis angulata , F. O. neptuni, G. O. warwickii
Following Spear et al (1994), Thecostraca, represented by the subclasses Ascothoracida and Cirripedia (the
latter including the Acrothoracica, Rhizocephala, and Thoracica is mornophyletic taxon. Here we detected
Thecostraca monophyly: Thoracica (Lepadiformes/Sesilia)/Rhizocephala (Kentrogonida). The sister relationship
of Thoracica and Rizocephala has been previously reported (Hoeg et al, 2009), and also support here in.
CONCLUSIONS
We found seven species of crustacean on Portunus pelagicus. Among that, 2 probably new for science.
Common occurring species (5/7 species) show significant differences in distribution (north, central, south along
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
the coast of Vietnam), sexes and size groups of the host crab species. The phylogenetic tree supported two
separate lineages following the existing taxonomic system o crustacean species.
Fig. 2. Photo image description of infected sites of symbiosis crustaceans on Portunus pelagicus. A&B. Ventral and dorsal view of
heavy infected crab. C. Infected sites of C. cf. testudinaria (1), E. O. warwackii (2), G. Balanomorpha sp (3), D. O. angulata (4), F. O.
neptuni (5), H. T. tridens (6), and I. C. indica (7)
Fig.3. Phylogenetic tree of symbiotic crustacean species resulting from the Bayesian inference analysis of combined 28S rRNA and
COI mtDNA dataset. BT and PP values were presented on the branch.
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
Proceedings of ISER 169th International Conference, Bangkok, Thailand, 21st-22nd November, 2018
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Species Diversity and Phylogenetic Relationships of Symbiotic Crustaceans on Portunus Pelagicus (Linneus 1758) in Vietnam
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