(A Denanthera Pavonina: Albizzia Acacia Erythrina Peltophorum
(A Denanthera Pavonina: Albizzia Acacia Erythrina Peltophorum
(A Denanthera Pavonina: Albizzia Acacia Erythrina Peltophorum
Elsevier
BBA32457
T h e amino acid sequence and reactive (inhibitory) site of the major trypsin
isoinhibitor (DE5) isolated from seeds of the Brazilian Carolina tree
( A denanthera pavonina L.)
M. R i c h a r d s o n a,,, F.A.P. C a m p o s b, j. X a v i e r - F i l h o b, M . L . R . M a c e d o b,
G . M . C . M a i a b a n d A. Y a r w o o d a
a Department of Botany, Unioersity of Durham, Science Laboratories, South Roaa~ Durham City Dill 3LE (U.K.) and
b Department of Biochemistry and Molecular Biology, Science Centre, Federal University of Cear,~,
60,000 Fortaleza (CE) (Brazil)
Key words: Trypsin inhibitor; Amino acid sequence; Reactive site; Legume Kunitz inhibitor; (A. pavonina)
Eight iso-inhibitors of trypsin were isolated from seeds of the Brazifian Carolina tree (Adenantherapavonina
L.) by precipitation with ammonium sulphate, gel filtration, affinity chromato~tphy on enzymatically inert
anhydrotrypsin Sepharose 4B, and separated by ion-exchange chromatography on DEAE-Sepharose. The pl
values of the isoinhibitors 0DEI-DES) ranged from 5.10 to 4.40. Each isoinhibitor had an Mr of approx.
21000 and was composed of a large a chain (M r 16000) and a smaller fl chain (M r 5000) linked together by
a disulphide bond. The complete amino acid sequence of isoinhibitor DE5 (pl 4.75) was deduced by analysis
of peptides and fragments derived from the separated a and fl chains by digestion with trypsin, chyumtryp-
sin, pepsin, thermolysin, the Staphylococcus aureus V8 proteinase and iodosobenzoic acid. The sequence of
the Carolina DE5 isoinhibitor and the location of its reactive (trypsin-inhibitory) peptide bond showed clear
homology with the Kunitz-type proteinase inhibitors from soybean, winged bean and a number of other
legume seeds.
although it has clear sequence homology with the gradient programmer using appropriately selected
single-chain Kunitz inhibitors from soybean and gradients of NaC1 (in the range 0.05-0.25 M) in
winged bean, differs in that it is composed of two 0.02 M Tris-HC1 (pH 7.6).
polypeptide chains linked by a disulphide bond. Assay of trypsin isoinhibitor activity. The inhibi-
tory activities of the native isoinhibitors against
Materials and Methods trypsin were determined by measuring the hydrol-
ysis of a-N-bcnzoyl-oL-ar~nine-p-nitroanilidc
Purification of Carolina isoinhibitors. Seeds of (Sigma) at pH 8 [25]. The concentration of active
A. pavonina were collected from trees growing in trypsin used was estimated by titration of the
Fortaleza in north-east Brazil. After removal of active site with p-nitrophcnyl-p'-guanidino-
the testas the cotyledons (50 g) were milled (20 benzoate HC1 as described in Rcf. 26.
mesh screen) and extracted three or four times Electrophoretic procedures. SDS-polyacrylamide
with 20 ml of acetone until the supernatant was gel electrophoresis in the presence and absence of
colourless. The dried meal was milled again (60 2-mcrcaptoethanol was carried out in 7.5% gels
mesh) and the flour was extracted with 0.1 M [27]. Isoclectric focusing was carried out on 5%
sodium phosphate buffer (pH 7.6) in 1% NaC1 acrylamide gels containing 4% crosslinker and a
(1 : 5, w/v) for 2 h. The extract was centrifuged at 2% (w/v) mixture of the pH 4-6, pH 6-8 and pH
10000 × g for 30 min at 4°C and the supernatant 3.5-10 ampholines ( 6 : 2 : 1 , v/v) as described in
was subjected to fractional precipitation with Rcf. 28.
(NH4)2SO 4. The 40-60% (5.7 g protein) precipi- Separation of two chains of isoinhibitor DE5.
tate was collected and dialyzed against distilled Isoinhibitor DE5 (40 mg) was reduced and S-
water and lyophilized. The protein (300 rag) was carboxymethylated as in Rcf. 29. The reaction
then applied to a column (95 × 2.5 cm) of Sep- mixture was applied directly to a column (1 × 150
hadex G-50 equilibrated with 0.1 M formic acid. cm) of Bio-Gcl P-60 (100-200 mesh) equilibrated
The single peak of anti-tryptic activity obtained in 0.1 M ammonium bicarbonate (pH 8.1) and
was recovered after dialysis against distilled water eluted in the dark. Pcptidcs were located by their
by lyophilization. This material was then applied absorbance at 280 nm and 230 nm.
to an affinity column (1.5 × 10 cm) of enzymati- Sequence determination. Samples (4-10 mg) of
cally inert anhydrotrypsin (dehydroalanine) the two polypcptide chains of the reduced and
[22-24] coupled to CNBr-activated Sepharos¢ 4B S-carboxymcthylated isoinhibitor DE5 were di-
(Pharmacia Ltd.) in 0.1 M phosphate (pH 7.6) gested separately with trypsin, chymotrypsin,
containing 0.3 M NaC1. After washing extensively pepsin, thermolysin and the S. aureus V8 pro-
with the same buffer the trypsin isoinhibitors were tcinasc, as described in Refs. 30 and 31. The
eluted with 0.1 M HC1, containing 0.3 M NaC1, mixtures of peptides produced by these methods
dialyzed against distilled water and lyophilized. were initially fractionated on columns (1 x 200
Separation of isoinhibitors. The mixture of isoin- cm) of Bio-Gcl P-6 in 0.05 M ammonium bi-
hibitors (130 mg) obtained from the anhydrotryp- carbonate as in Ref. 31. Further purification of
sin affinity column was applied to a column 1.5 × peak fractions was achieved by reverse-phase
50 cm) of DEAE-Sepharose CL-6B (Pharmacia HPLC as described in Ref. 32. Cleavage of the a
Ltd.) equilibrated in 0.05 M Tris-HCl (pH 7.6) chain of DE5 with iodosobenzoic acid and sep-
and eluted with a linear gradient of 0.05-0.25 M aration of the resulting fragments was carried out
NaCl in the same buffer (500 ml of each) at a flow as in Rcf. 32.
rate of 40 ml/h. This procedure yielded eight The intact a and fl chains of DE5 and the
major peaks of anti-trypsin activity (DE1-DE8). fragments or pcptidcs derived from them were
After dialysis the pooled material in each peak sequenced using the 4-N,N-dimcthylaminoazo-
was then subjected to rechromatography on the benzcnc-4'-isothiocyanatc (DABITC)/phenyhso-
same column or FPLC on a column (0.5 x 5 cm) thiocyanate double coupling method, the dansyl-
of Mono Q H R 5/5 (Pharmacia) with a Pharmacia Edman procedure, digestion with carboxypepti-
P-500 pumping system controlled by a GP-250 dase A and amino acid analyses all as in Ref. 31.
136
A23O
I I I I I I = , [NcICI] T h e o n l y m a j o r h e t e r o g e n e i t y o b s e r v e d in iso-
i n h i b i t o r D E 5 o c c u r r e d at the N - t e r m i n u s of the fl
c h a i n where b o t h p r o l i n e a n d leucine were ob-
served in a p p r o x i m a t e l y equal a m o u n t s . M i n o r
" 0.8 L (less than 10%) e x a m p l e s o f heterogeneity were
0.6
/
./ / A - 0.1 M d e t e c t e d in the a chain in p o s i t i o n s 4 (Phe r e p l a c -
/
04 / t /
ing Leu), 6 ( A l a for Val), 11 (Phe for Leu), 22 (Val
/ for Ala), 49 (Ser for Ala), 52 ( G l n for Ser), 67 (Phe
0.2
_ ^ /~ ~ ~ ~_~ ~7 for Tyr), 89 ( G l y for Asp), 97 ( A s p for Glu), 108
40 80 120 160 ( G l u for Lys), 112 ( A r g for G l n ) , 113 (His for
FRACTION NO. Leu) a n d 120 ( G l n for Lys), a n d in the fl c h a i n at
Fig. 2. Separation of Carolina isoinhibitors on a column (1.5 x 22 (Lys for Glu). T h e existence of traces o f such
50 cm) of DEAE-Sepharose CL-6B. The mixture of isoinhibi- p o l y m o r p h i s m is n o t surprising in view o f the
tors (130 mg) obtained by affinity chromatography was applied m u l t i p l i c i t y of t r y p s i n isoinhibitors p r e s e n t in
in 0.05 M Tris-HCl (pH 7.6) to the column equilibrated in the C a r o l i n a seeds.
same buffer. The column was developed with a linear gradient
of NaCI concentration (0.05-0.25 M, 500 ml of each) at a flow Fig. 4 shows the clear sequence h o m o l o g y which
rate of 40 ml/h. The fractions (4 hal) indicated by bars were exists b e t w e e n the Adenanthera D E 5 i n h i b i t o r a n d
pooled. the Glycine and Psophocarpus K u n i t z - t y p e inhibi-
tors for which c o m p l e t e sequences are available.
a c i d s at their respective N - t e r m i n i , a n d their a m i n o C o n s i d e r a t i o n o f the three c o m p l e t e K u n i t z t y p e
a c i d c o m p o s i t i o n s d e a r l y i n d i c a t e d their close ho- sequences in Fig. 4 reveals that 47 residues are
m o l o g y with i s o i n h i b i t o r D E 5 ( u n p u b l i s h e d re- invariant, b u t this n u m b e r falls to 43 when the
suits). i n c o m p l e t e sequences o f the Acacia, Albizzia,
TABLEI
THE AMINO ACID COMPOSITIONS OF THE TRYPSIN ISOINHIBITOR DE5 FROM SEEDS OF CAROLINA
(ADENANTHERA PAVONINA) AND ITS CONSTITUENT a AND fl CHAINS
n.d., not determined.
~chain
I0 20 30 40 50 60
RELLDVDGNFLRNGGSYYIVPAFRGKGGGLELARTGSETCPRTVVQAPAEQSRCLPARLS
TI ~ l l T2 - - 4 1 T3 II T4 Jl T5 IF---.T6-~
I T3a I
cl ~ 1 c2 I ~ - c 3 - ~ i ..... c4 II c5 II c6 :~..
I vl ~1 v2 I~---...--v3 II v4
P1 II P2 II P3 : I P4 II
I HI~I~H2-----~ I IOB 1 , -
chain
130 I0 20 30
PYRDDYKLVYCEPQQGGR --r
~ E~C-K.D~L-GrI- v ~ ~ ~S ~I ~D'D,D N~N RRLAVKEGDPLVVQFVNADREGN
Erythrina and Peltophorum inhibitors are included proteins [12-19]. The precise physiological signifi-
in the comparison. Glycine and Psophocarpus, cance of the proteolytic processing of a single-
which are both members of the Papilionoideae chain precursor which is presumed [8] to give rise
(Phascoleae) show approx. 45~ homology between to the two-chained inhibitors of the Mimosoideae
their sequences, but Adenanthera which is classi- is unknown [10], as is the reason why. this cleavage
fied separately in the Mimosoideae (Aden- of a susceptible bond appears to be restricted to
anthereae) exhibits only 33-35~ homology with this sub-family.
either of these. Previous workers [21] have shown that the
The Adenanthera inhibitor is composed of two Adenanther~ inhibitor forms a 1 : 1 molar complex
disulphide-linked polypeptide chains and is simi- with trypsin, and this observation was confirmed
lar in this respect to the inhibitors in the other during this work by titration of the native inhibi-
representatives (Acacia, Albizzia) of the Mimo- tor with trypsin. The reactive (inhibitory) peptide
soideae sub-family which have been examined bond was identified in the usual way by limited
[8-11], whereas the Kunitz inhibitors found in hydrolysis of the native isoinhibitor DE5 with a
Glycine, Erythrina and Psophocarpus belonging to catalytic amount of trypsin at p H 2.5 for 20 h
the sub-family Papilionoideae and in Peltophorum which led to hydrolysis of the Arg-64-Ilc-65
(Caesalpinoideae) all appear to be single-chained peptide bond. This bond is in an exactly homolo-
139
LlO
b) IEPLLI]
i
s z l ~ zz~. v R s G
A P ^I~]Q s R
c) ~FVL~ TIY Y1,21~ S D T T A , - ~ I '1~ AIAI P TL~I NURI~ LIT V VIQ $ R N EL~ D K
d) ~ K E L L ~ A DIG ~1~ L L N G
e) ¢ g I K G L L r
~10
f) ' ~ * L L r ADIGDLL*SG
g) ILLI c ~lc ~ v ~ z kc
h) 1DFVL[ A El G KI~ L - N G
~ r'~ d120 1
S K E E1 | [ 120
b) S E L g S T X r D Y L[FIK F E g V T S - K F S SlY K L[K g ] q A g R
c) GENKDA~-DGW SDDEFNNYKLVF QQ.A
b)
o)
1o1 "1°1Z IDIII¢ 0Y R I°1Q
• ~ ~ ~IcIGi~i~i~|~ s ~i.|. v ~ ~
~ 6 V T
,,. g- [ 180
T l ~ l ~ U V M S K . ~1 P L v vIQ~jQ ~ ~ V ~lqS L
d) ' K D D H iclXioi Llor oS I ioI D D E N
~1 I I I I lezo I I
~) v n s SlClZPir.iGi I s HDI- v E S
/31 I I I i~101 I I
f) G w WE *IClQIDILIGII * VL~D " E
Fig. 4. Homology of the Carolina (Adenantkera) isoinhibitor DE5 (a), with the Kunitz inl'fibitors from (b) Psopkocarpus [19], (c)
Glycine [34], (d) Albizzia [8,9], (c) Acacia elata [10], (f) Acacia sieberana [11], (g) Erythrina latissima [12], and (h) Peltophorum [15].
Homologous residues are shown in boxes. The reactive (inhibitory) peptide bonds for trypsin are indicated by a vertical arrow. *,
unidentified residues. - , gaps inserted to facilitate comparisons.
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551-557 Biochem., Abstract TV-182, Amsterdam
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