03 Cell Biology
03 Cell Biology
03 Cell Biology
Brendo V. Jandoc, MD
TYPES of ORGANISMS
A. Prokaryotes
B. Eukaryotes
C. Viruses
- obligatory cellular parasites
1. Bacteriophages
COMPARISON of
EUKARYOTES and PROKARYOTES
Cell Lysis
3. Organelles
4. Cytoskeleton
COMPARISON of
EUKARYOTES and PROKARYOTES
EUKARYOTIC MEMBRANES
A. Functions
- compartmentalize and segregate
- selective barriers
- localize specific enzyme systems
- semisolid-phase in an aqueous environment
- channels and pumps
- specific receptors
- exchange of materials
- gap junctions
- excitation-response coupling
- energy transduction
EUKARYOTIC MEMBRANES
B. Clinical Significance
1. Gross Alterations
2. Specific Component Deficiency or Alteration
EUKARYOTIC MEMBRANES
C. Structure of the Plasma Membrane
EUKARYOTIC MEMBRANES
type 1 DM
EUKARYOTIC MEMBRANES
E. Transport of Molecules across the Plasma Membrane
4. Gated Channels in Plasma Membranes
a. Mechanism
i. Voltage Changes (voltage-gated
channels)
ii. Binding of a Compound (ligand-
gated channels)
EUKARYOTIC MEMBRANES
2. Exocytosis
EUKARYOTIC MEMBRANES
H. Homeostasis
1. Body Water Compartments
- 60% of lean body mass
a. ICF - 2/3 of total water
- internal environment
b. ECF
- 1/3 of total water
- delivery system
EUKARYOTIC MEMBRANES
H. Homeostasis
2. Ionic Composition of the Fluid Compartments
EUKARYOTIC ORGANELLES
A. Nucleus
EUKARYOTIC ORGANELLES
A. Nucleus
1. Functions
2. Structure
a. Nuclear Envelop
- dynamic
i. Outer Nuclear Membrane
- continuous with the RER
ii. Inner Nuclear Membrane
iii. Perinuclear Space
EUKARYOTIC ORGANELLES
A. Nucleus
2. Structure
b. Nuclear Pores
i. Functions
EUKARYOTIC ORGANELLES
A. Nucleus
2. Structure
b. Nuclear Pores
ii. Specificity and Direction of Travel
Through the Nuclear Pore
- dictated by binding proteins
iia. Importins
- proteins transported into the
nucleus
iib. Exportins
- RNAs transported from the
nucleus to the
cytoplasm
EUKARYOTIC ORGANELLES
A. Nucleus
2. Structure
c. Nuclear Lamina
- nucleoplasmic side of inner
nuclear membrane
- fibrous network made of
lamins
d. Mitosis
- phosphorylation of lamins
nuclear envelop
breakdown
EUKARYOTIC ORGANELLES
A. Nucleus
2. Structure
e. Chromatin
- nucleoprotein complex composed of
- DNA
- histones
- other proteins
f. Nucleolus
- synthesis of most of the rRNA
- size directly reflects the cell’s synthetic
activity
EUKARYOTIC ORGANELLES
C. Golgi Complex
1. Functions
- modify protein
- sort and distribute proteins to
- lysosomes (tags lysosomal-
targeted proteins)
- secretory vesicles
- plasma membrane
EUKARYOTIC ORGANELLES
C. Golgi Complex
2. Structure
- Golgi stack or dictyosome
a. Three Compartments
i. Cis-Golgi Network
- often convex
- faces the nucleus
ii. Medial Golgi Stacks
iii. Trans Golgi Network
- often faces the
plasma
membrane
EUKARYOTIC
ORGANELLES
C. Golgi Complex
2. Structure
b. Three Vesicles
- transport proteins to
and from the
Golgi
i. Coatomer-Coated COP
I Vesicles
ii. Coatomer-Coated COP
II Vesicles
iii. Clathrin-Coated
Vesicles
EUKARYOTIC ORGANELLES
C. Golgi Complex
2. Structure
c. vesicle-SNARES
- proteins contained by vesicle membranes
d. Additional Proteins Required for Fusion of the
Vesicle with the Target Membrane
i. Rab (monomeric G protein)
ii. SNAP (soluble NSF attachment proteins)
iii. NSF (N-ethylmaleimide sensitive factor)
EUKARYOTIC
ORGANELLES
C. Golgi Complex
2. Structure
c. vesicle-SNARES
d. Additional Proteins
Required for
Fusion of the
Vesicle with the
Target Membrane
i. Rab
ii. SNAP
iii. NSF
EUKARYOTIC ORGANELLES
C. Golgi Complex
2. Structure
e. Exocytotic Vesicles
insulin is synthesized as
proinsulin incorporated into
secretory vesicles
D. Lysosomes
5. Chloroquine
- antimalarial and amebicidal
- inactivate lysosomal enzymes by neutralizing
the lumen of the lysosome inhibition of
the parasites’ lysosomal hydrolases
EUKARYOTIC ORGANELLES
E. Peroxisomes
1. Functions
- oxidative reactions using molecular
oxygen produce H2O2
- oxidation of very long chain fatty acids
- conversion of cholesterol to bile acids
- synthesis of ether lipids (plasmalogens)
- contain enzymes that degrade amino
acids and fatty acids
formation of H2O2
- contain large amount of catalase
EUKARYOTIC ORGANELLES
E. Peroxisomes
2. Structure
- similar structure and size to lysosomes
- single membrane
EUKARYOTIC ORGANELLES
E. Peroxisomes
Peroxisomal Diseases
Adrenoleukodystrophy
- mutation that decreases content of a
transporter in the peroxisomal
membrane
Zellweger’s Syndrome
- failure to complete synthesis of
peroxisomes
EUKARYOTIC ORGANELLES
F. Ribosomes
- site of protein synthesis
- eukaryotic cytosolic ribosomes
- attached to a single mRNA
- polysomes
- monosomes
G. Mitochondria
- replicate independently
- enzymes
- fuel oxidation
- electron transport chain
- oxidative phosphorylation
EUKARYOTIC
ORGANELLES
G. Mitochondria
1. Structure
a. Inner Membrane
- invaginations or folds
- contain
- electron transport
chain
- ATP synthase
b. Outer Membrane
- porins
- permeable
c. Mitochondrial Matrix
- most of the enzymes for the
TCA cycle
- other pathways for oxidation
- mtDNA and ribosomes
EUKARYOTIC ORGANELLES
G. Mitochondria
2. Replication
- by division
- most mitochondrial enzymes and proteins are
encoded by nuclear DNA and synthesized
on cytoplasmic ribosomes
a. mtDNA
- encodes only 13 different subunits of
proteins involved in oxidative
phosphorylation
- genetic code differs from the that of
chromosomal DNA
- maternally inherited
b. mtRNA
- most of comes from mtDNA
EUKARYOTIC ORGANELLES
G. Mitochondria
Mitochondial Diseases
Mutations in mtDNA genetic diseases
that affect skeletal muscle, neuronal, and
renal tissues
Implicated in aging
EUKARYOTIC
CYTOSKELETON
A. Microfilaments
1. Structure
- made of actin actin filaments
a. Actin Filaments
- control cell shape and
movement
EUKARYOTIC
CYTOSKELETON
A. Microfilaments
1. Structure
a. Actin Filaments
i. F-Actin
- polymerized state filamentous form
- composed of helical arrangement of globular
G-actin subunits
- dynamic
- form the thin filaments (microfilaments) in
the cell
EUKARYOTIC
CYTOSKELETON
A. Microfilaments
1. Structure
a. Actin Filaments
ii. G-Actin
- unpolymerized state actin is a globular
protein
- contains bound ATP or ADP that holds the
actin fold into a closed conformation
- new subunits of G-actin containing ATP
continuously combine with the
assembled F-actin polymer
EUKARYOTIC CYTOSKELETON
A. Microfilaments
1. Structure
a. Actin Filaments
iii. Short Actin Filaments
- bind to the cross-linking protein spectrin to form
the cortical actin skeleton network
iv. Long Actin Filaments
- combine with thick filaments, composed of the
protein myosin, to produce muscle
contraction
EUKARYOTIC CYTOSKELETON
A. Microfilaments
2. Function
A. Microfilaments
3. Drugs That Affect Microfilaments
a. Cytochalasin B
- inhibits microfilament assembly
b. Phalloidin
- inhibit depolymerization of actin
filaments
c. a-Amanitin
EUKARYOTIC CYTOSKELETON
B. Intermediate Filaments
1. Structure
- fibrous protein polymers that provide
structural support scaffolding
- long, rod-like a-helical molecules
- thicker than actin filament
- thinner than microtubules
EUKARYOTIC
CYTOSKELETON
B. Intermediate Filaments
1. Structure
EUKARYOTIC CYTOSKELETON
B. Intermediate Filaments
2. Major Classes
EUKARYOTIC
CYTOSKELETON
B. Intermediate Filaments
3. Functions
- structural
- cell-to-cell attachment
- stabilize the epithelium
EUKARYOTIC CYTOSKELETON
B. Intermediate Filaments
C. Microtubules
1. Structure
- cylindrical
- made tubulin (a, b)
a. Microtubule-Associated Proteins
(MAPs)
- component of regulation of
microtubule assembly
and disassembly
- can determine cell shape and
polarity
EUKARYOTIC CYTOSKELETON
C. Microtubules
1. Structure
b. Three Tubulin Polypeptides
a
b
g
i. a, b Dimers
- polymerize to form most
microtubules
ii. g-Tubulin
- found only in the centrosome
EUKARYOTIC CYTOSKELETON
C. Microtubules
2. Functions
- intracellular and extracellular movement
- with dynein generate contractile force
(beating of cilia and flagella)
- form tracts on which intracellular vesicles and
organelles move
C. Microtubules
3. Effects of Antimitotic Drugs on Microtubules
- block microtubule assembly (polymerization)
or disassembly (depolymerization)
a. Drugs That Inhibit Microtubule Assembly
i. Vinblastine
ii. Vincristine
iii. Podophyllotoxin
iv. Colchicine
EUKARYOTIC CYTOSKELETON
C. Microtubules
3. Effects of Antimitotic Drugs on
Microtubules
a. Drugs That Inhibit Microtubule Assembly
iv. Colchicine
- blocks microtubule
polymerization
inhibition of
phagocytosis of
uric acid crystals by
WBCs
b. Taxanes
- inhibits microtubule disassembly
CELL SHAPE and MOTILITY
A. Cytoskeleton
- cell shape and surface structures
B. Microvilli
C. Motile Cilia
1. Axoneme
- at the core of motile cilia
2. Dynein
- motor domain
D. Non-Motile or Primary Cilia
- for signalling during development and in the
adult
E. Flagella
CELL SHAPE and MOTILITY
F. Cell Motility
1. How the Actin Cytoskeleton is Remodelled
Determines the Mode of Migration
a. Filopodia
- remodelled in one dimension
long actin filament
leading edge of
plasma membrane
pushed forward as
spikes
b. Lamellipodia
- remodelled in two dimensions
cross-linked actin
microfilaments
broad flat skirt
c. Pseudopodia
The CELL