Space Group
Space Group
ON FUNDAMENTAL
CRYSTALLOGRAPHY
SPACE-GROUP
SYMMETRY
(short overview)
Mois I. Aroyo
Universidad del Pais Vasco, Bilbao, Spain
SPACE GROUPS
Definition: A mapping of a set A into a set B is a relation such that for each element a ∈A there is a
unique element b∈ B which is assigned to a. The element b is called the image of a.
Matrix representation
drawing: M.M. Julian
my x -x -1 x
Foundations of Crystallography
c Taylor & Francis, 2008
� y
= y
= 1 y
Fixed points
= ? tr
-1
det
-1
1
= ?
xf 1
m y
xf
yf
= yf
Description of isometries
isometry:
X ~
X
(x,y,z) ~ ~~
(x,y,z)
~
x = F1(x,y,z)
Matrix notation for system
of linear equations
Matrix-column presentation of
isometries
linear/matrix translation
part column part
(W1,w1)=
( -1
1
-1
0
0
0
) (W2,w2)=
( -1
1
-1
1/2
0
1/2 )
Determine the images Xi of a Can you guess what is the
point X under the symmetry geometric ‘nature’ of (W1,w1)?
operations (Wi,wi) where
And of (W2,w2)?
0,70
X= 0,31 Hint:
0,95 A drawing could be rather helpful
EXERCISES Problem
Characterization of the symmetry operations:
det ( )-1
1
-1
=? tr
( )
-1
1
-1
=?
( -1
1
-1
1/2
0
1/2
) xf
yf
zf
=
xf
yf
zf
Short-hand notation for the description
of isometries
(W,w) ~
isometry: X X
1 0
x+1/2, y, z+1/2
-1 1/2
EXERCISES
Problem 2.14
(W,w) ~
isometry: X X
1 0
x+1/2, y, z+1/2
-1 1/2
Combination of isometries
(U,u)
~
X X
(V,v)
(W,w)
~
~
X
EXERCISES Problem
(W1,w1)=
( 0
1
-1
0
1
0
0
0
) (
(W2,w2)=
-1
1
-1
1/2
0
1/2 )
Determine and compare the matrix-column pairs of the combined
symmetry operations:
(W,w)=(W1,w1)(W2,w2)
(W,w)’=(W2,w2)(W1,w1)
combination of isometries:
Inverse isometries
(W,w)
X ~
X
~
~
X (C,c)=(W,w)-1
C=W-1
c=-Cw=-W-1w
EXERCISES Problem
(W1,w1)=
( 0
1
-1
0
1
0
0
0
) (
(W2,w2)=
-1
1
-1
1/2
0
1/2
)
Determine the inverse symmetry operation (W,w)-1
(W,w)=(W1,w1)(W2,w2)
inverse of isometries:
EXERCISES
Problem
Consider the matrix-column pairs
Matrix formalism: 4x4 matrices
augmented
matrices:
point X −→ point X̃ :
4x4 matrices: general formulae
point X −→ point X̃ :
Screw rotation
n-fold rotation followed
by a fractional
p
translation n t parallel
to the rotation axis
reflection followed by a
fractional translation
1
2 t parallel to the plane
( ) W11
W21
W31
W12
W22
W32
W13
W23
W33
0
0
0
0
=
0
Translation:
( ) 1
1
w1
w2
w3
x
z
=
x+w1
y+w2
z+w3
( ) -1
-1
-1
0
0
x
z
=
-x
-y
-z
Geometric meaning of (W , w )
W information
(a) type of isometry
order: Wn=I
rotation angle
EXERCISES Problem 2.14 (cont)
Problem (cont.)
Consider the matrix-column pairs
Texto
(b) axis or normal direction :
(b1) rotations:
(b2) roto-inversions:
reflections:
EXERCISES Problem 2.14 (cont)
reflections: Y(-W) = - W + I
Geometric meaning of (W , w )
W information
det(Z):
x non-parallel to
Geometric meaning of (W , w )
w -information
w
EXAMPLE Space group P21/c (No. 14)
symmetry-elements general-position
diagram diagram
Fixed points of isometries
solution:
(W,w)Xf=Xf point, line, plane or space
no solution
Examples:
( )
What are the
0 1 0
fixed
0 x x
solution: -1 0 0 1/2 y = y
0 0 1 0 z z points of this
isometry?
no solution:
( )0
-1
0
1
0
0
0
0
1 1/2
0
0
x
z
=
x
z
Geometric meaning of (W,w) (W,w)n=(I,t)
(W,w)n=(Wn,(Wn-1+...+ W+I)w) =(I,t)
w
Fixed points of (W,w)
(B1) t/k = 0:
(B2) t/k ≠ 0:
Fixed points of isometries
solution: point, line, plane or space
(W,w)Xf=Xf no solution
Example: (W,w)=
( 0
-1
0
1
0
0
0
0
1
1/2
1/2
0
(A) (W,w) 4=
( 1
0
0
0
1
0
0
0
1 )
0
2
t/k=
1/2
0
0 (W,w-t/k)=
( 0
-1
0
1
0
0
0
0
1
0
1/2
0 )
(B) Y(W) = Wk-1 + Wk-2 + ... + W + I
0 -1 0 -1 0 0 0 1 0 1 0 0 0 0 0
Y(W)= 1 0 0 + 0 -1 0 + -1 0 0 + 0 1 0 = 0 0 0
0 0 1 0 0 1 0 0 1 0 0 1 0 0 4
W3 W2 W I
EXERCISES Problem 2.14 (cont.)
screw rotations:
Y(W) = Wk-1 + Wk-2 + ... + W + I
glide reflections: w
fixed points:
EXAMPLE Space group P21/c (No. 14)
symmetry-elements general-position
diagram diagram
PRESENTATION OF
SPACE-GROUP SYMMETRY
IN
INTERNATIONAL TABLES
VOL. A
INTERNATIONAL TABLES FOR
CRYSTALLOGRAPHY
VOLUME A: SPACE-GROUP SYMMETRY
secondary tertiary
primary direction direction
direction
14 Bravais Lattices
crystal family
Hermann-Mauguin symbols for space groups
SPACE-GROUP
SYMMETRY OPERATIONS
Crystallographic symmetry operations
x+1/2,-y+1/2,z -x+1/2,y+1/2,z
Problem 2.15 (a) Space group Cmm2 (No. 35)
Geometric
interpretation
.e s
h u
t .e
ys
.c r
w w
w
Crystallographic databases
Group-subgroup
relations Structural utilities
Representations of
point and space groups
Solid-state applications
Crystallographic
Databases
International Tables for
Crystallography
Bilbao Crystallographic Server
space group
35
Example GENPOS: Space group Cmm2(35)
Matrix-column
presentation
of symmetry
operations
Geometric
interpretation
ITA
data
Bilbao Crystallographic Server
Problem: Geometric SYMMETRY
Interpretation of (W,w) OPERATION
EXERCISES Problem 2.14
three different
settings
permutations
of a,b,c
Diagram of general
position points
Space group Cmm2 (No. 35)
Diagram of
symmetry elements
conventional setting
Diagram of general
position points
How many
general position
points per unit
cell are there?
Example: P4mm
}
All rotations and screw
Symmetry operations 1st, 2nd, 3rd powers + rotations with the same axis,
that share (0,0,z) as all coaxial equivalents the same angle and sense of
geometric element rotation and the same screw
vector (zero for rotation) up to
Element set of (0,0,z) line a lattice translation vector.
2 -x,-y,z
4+ -y,x,z
4- y,-x,z
2(0,0,1) -x,-y,z+1
... ...
ORIGINS
AND
ASYMMETRIC UNITS
Space group Cmm2 (No. 35): left-hand page ITA
Origin statement
The site symmetry of the origin is stated,
if different from the identity.
A further symbol indicates all symmetry
elements (including glide planes and
screw axes) that pass through the origin, if any.
ITA:
( a
d
g
b
e
h
c
f
i )
w1
w2
w3
x0
y0
z0
=
x0
y0
z0
General position Xo
S={(1,o)}≃ 1
Special position Xo
S> 1 ={(1,o),...,}
~
(i) coordinate triplets of an image point X of
the original point X under (W,w) of G
Group P-1
( -1
-1
-1
0
0 ) 1/2
1/2
=
-1/2
-1/2
space group
Example WYCKPOS: Wyckoff Positions Ccce (68)
2 1/2,y,1/4
2 x,1/4,1/4
EXERCISES Problem 2.16
( )
-1
(X’)=(P,p)-1(X) x’ P11 P12 P13 p1 x
y’ = P21 P22 P23 p2 y
=(P-1, -P-1p)(X) z’ P31 P32 P33 p3 z
special cases
-origin shift (P=I):
-change of basis (p=o) :
(W’,w’)=(P,p)-1(W,w)(P,p)
Transformation by (P,p) of the unit cell parameters:
Monoclinic descriptions
Orthorhombic descriptions
No. HM abc bac̄ cab c̄ba bca ac̄b
33 P na21 P na21 P bn21 P 21 nb P 21 cn P c21 n P n21 a
Bilbao Crystallographic Server
space group
Transformation ITA-settings
of the basis symmetry data
Example GENPOS:
(W,w)A112/a=
(P,p)-1(W,w)C12/c1(P,p)
space group
ITA
settings
Transformation
of the basis
EXERCISES Problem 2.18
Consider the space group P21/c (No. 14). Show that the
relation between the General and Special position data of
P1121/a (setting unique axis c ) can be obtained from the data
P121/c1(setting unique axis b ) applying the transformation
(a’,b’,c’)c = (a,b,c)bP, with P= c,a,b.