Deoxyribo Nucleic Acid
Deoxyribo Nucleic Acid
Deoxyribo Nucleic Acid
SECONDARY SCHOOL
COIMBATORE-641035
BIOLOGY PROJECT
Submitted by,
E.Joel
Xth – B,
Biology Project E.Joel, Xth-B
BOTANY
Table of Content:
S.No Content
1. De-oxyribo Nucleic Acid(DNA)
2. Medicinal plants
Structure of DNA:
Medicinal plant:
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Molecular Arrangement:
DNA consists of two long polymers of simple units called nucleotides, with
backbones made of sugars and phosphate groups joined by ester bonds. These
two strands run in opposite directions to each other and are therefore anti-
parallel. Attached to each sugar is one of four types of molecules called bases. It
is the sequence of these four bases along the backbone that encodes information.
This information is read using the genetic code, which specifies the sequence of
the amino acids within proteins. The code is read by copying stretches of DNA
into the related nucleic acid RNA, in a process called transcription.
Within cells, DNA is organized into long structures called chromosomes. These
chromosomes are duplicated before cells divide, in a process called DNA
replication. Eukaryotic organisms (animals, plants, fungi, and protists) store
most of their DNA inside the cell nucleus and some of their DNA in organelles,
such as mitochondria or chloroplast. In contrast, prokaryotes (bacteria and
Achaea) store their DNA only in the cytoplasm. Within the chromosomes,
chromatin proteins such as histones compact and organize DNA. These compact
structures guide the interactions between DNA and other proteins, helping
control which parts of the DNA are transcribed.
Properties:
DNA is a long made from repeating units called nucleotides. The DNA chain is
22 to 26 ångströms wide (2.2 to 2.6 nanometers), and one nucleotide unit is
3.3 Å (0.33 nm) long.] Although each individual repeating unit is very small,
DNA polymers can be very large molecules containing millions of nucleotides.
For instance, the largest human chromosome, chromosome number 1, is
approximately 220 million base pairs long.
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The backbone of the DNA strand is made from alternating phosphate and sugar
residues.[10] The sugar in DNA is 2-deoxyribose, which is a pentose
(five-carbon) sugar. The sugars are joined together by phosphate groups that
form phosphodiester bonds between the third and fifth carbon atoms of adjacent
sugar rings. These asymmetric bonds mean a strand of DNA has a direction. In a
double helix the direction of the nucleotides in one strand is opposite to their
direction in the other strand: the strands are antiparallel. The asymmetric ends of
DNA strands are called the5′ (five prime) and 3′ (three prime) ends, with the 5'
end having a terminal phosphate group and the 3' end a terminal hydroxyl
group. One major difference between DNA and RNA is the sugar, with the 2-
deoxyribose in DNA being replaced by the alternative pentose sugar ribose in
RNA
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Branched DNA
Single Multiple
branch branches
A section of DNA, The bases lie horizontally between the two spiralling strands.
DNA double helix is stabilized by hydrogen bonds between the bases attached
to the two strands. The four bases found in DNA are adenine (abbreviated A),
cytosine (C), guanine (G) and thymine (T). These four bases are attached to the
sugar/phosphate to form the complete nucleotide, as shown for adenosine
monophosphate.
These bases are classified into two types; adenine and guanine are fused five-
and six-membered heterocyclic compounds called purines, while cytosine and
thymine are six-membered rings called pyrimidines. A fifth pyrimidine base,
called uracil (U), usually takes the place of thymine in RNA and differs from
thymine by lacking a methyl group on its ring. Uracil is not usually found in
DNA, occurring only as a breakdown product of cytosine. In addition to RNA
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and DNA, a large number of artificial nucleic acid analogues have also been
created to study the proprieties of nucleic acids, or for use in biotechnology.
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MATERIALS
PROCEDURES AND
OBSERVATIONS
FIGURE 2
The rungs of the DNA ladder consist of pairs of nitrogen bases. There are two
kinds of nitrogen bases: purines and pyrimidines. The purines have a two-ringed
structure; they are adenine (A) and guanine (G). The pyrimidines have a one-
ring structure; they are cytosine (C) and thymine (T).
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Figure 3 shows the structures of the four nitrogen bases found in DNA.
Note the symbols for the bases.
A nucleotide consists of one nitrogen base, one phosphate group, and one
deoxyribose molecule.
Study Figure 4 to see how the phosphate group, deoxyribose molecule,
and nitrogen base are related in a nucleotide. Each nitrogen base is
attached to the deoxyribose- side of a phosphate-deoxyribose
combination. Note that because there are four different nitrogen bases
there are four kinds of nucleotides.
FIGURE 3 FIGURE 4
1. Cut out the phosphate, deoxyribose, and nitrogen base symbols below.
Paste them onto a piece of cardboard and cut them out.
2. Then rise the cardboard symbols to trace symbols on construction paper.
Trace and cut out 20 each of the phosphate and deoxyribose symbols and
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5 of each nitrogen base symbol. Use a different color paper for each
symbol. Label each nitrogen base with its abbreviation.
3. Make a nucleotide model by laying a phosphate, a deoxyribose, and a
nitrogen base symbol on the pattern in Figure 5. Fasten the symbols
together with short pieces of transparent tape. Prepare 20 nucleotides. Be
sure to attach the symbols at the correct angles to one another. Otherwise
your DNA model will not fit together properly.
4. In DNA, a particular purine always bonds with a particular pyrimidine.
Adenine bonds to thymine and guanine bonds to cytosine. The purines
and pyrimidines are bonded together by hydrogen bonds.
5. Study Figure 6 to see how the nitrogen bases are bonded together in a
DNA segment. Then construct a 10-rung model segment of DNA using
the nucleotides you have assembled. Match up two nitrogen bases, either
A-T or G-C, in each ladder rung. Use short pieces of tape for the bonds.
The rungs of the ladder must be of equal length. The nucleotides of each
strand can be in any sequence, as long as the two nitrogen bases paired
together in the rung are correct. Attach the deoxyribose molecules and the
phosphate groups of each strand with tape.
6. Label Figure 7 to show the nucleotide sequences of the DNA model that
you constructed. Draw in the shapes of the nitrogen base symbols and
label them A, T, G, or C.
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DNA can replicate itself. In this way, the hereditary information encoded in its
structure is parsed on to new cells formed by mitosis. During replication, the
DNA double helix untwists, and the bonds between the nitrogen bases of each
rung break. Nucleotides are normal constituents of cells, and as the DNA double
helix splits apart, free nucleotides link up to matching nucleotides of each DNA
strand according to the rules of base pairing. The two new double-
stranded chains then twist into two separate double helixes. In this way two
identical DNA molecules are formed.
a. Lay your DNA model flat on the table. Starting at one end of the model,
cut the pieces of tape that connect the nitrogen bases on five of the rungs.
Be careful not to cut the symbols. The effect is something like unzipping
a zipper. Lay the unzipped model aside.
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Conclusion:
Thus one can prepare the model of DNA, for better understanding of its
Structure, molecular arrangement and the way it functions.
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Traditional use:
TRIBAL: Leaf-
pulp: in liver
troubles, jaundice,
fever, gonorrhoea,
spleen disorder,
rheumatism, piles,
dysmenorrhoea,
sterility in women;
Leaf-mucilage:
mild laxative, to
cure hardening of
breast tissues, in
insect stings.
AYURVEDA:
alternative, bitter,
cooling, purgative, sweet, tonic, anthelmintic, useful in eye diseases,
tumours, enlargement of spleen, liver troubles, vomiting, skin diseases,
biliousness, asthma, leprosy, jaundice, strangury, ulcer; Flowers:
anthelmintic.
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Zoology
Table of Content:
S.No Content
1. CT scan
2. Blood Smear
CT Scan
Blood Smear:
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Terminology
The word "tomography" is derived from the Greek tomos (slice) and graphein
(to write). Computed tomography was originally known as the "EMI scan" as it
was developed at a research branch of EMI, a company best known today for its
music and recording business. It was later known as computed axial tomography
(CAT or CT scan) and body section röntgenography.
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History
Tomography had been one of the pillars of radiologic diagnostics until the late
1970s, when the availability of minicomputers and of the transverse axial
scanning method, this last due to the work of Godfrey Hounsfield and South
African-born Allan McLeod Cormack, gradually supplanted it as the modality
of CT
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It has been claimed that thanks to the success of The Beatles, EMI could fund
research and build early models for medical use.[8] The first production X-ray
CT machine (in fact called the "EMI-Scanner") was limited to making
tomographic sections of the brain, but acquired the image data in about 4
minutes (scanning two adjacent slices), and the computation time (using a Data
General Nova minicomputer) was about 7 minutes per picture. This scanner
required the use of a water-filled Perspex tank with a pre-shaped rubber "head-
cap" at the front, which enclosed the patient's head. The water-tank was used to
reduce the dynamic range of the radiation reaching the detectors (between
scanning outside the head compared with scanning through the bone of the
skull). The images were relatively low resolution, being composed of a matrix
of only 80 x 80 pixels.
The first CT system that could make images of any part of the body and did not
require the "water tank" was the ACTA
(Automatic Computerized Transverse
Axial) scanner designed by Robert S.
Ledley, DDS, at Georgetown
University. This machine had 30
photomultiplier tubes as detectors and
completed a scan in only 9
translate/rotate cycles, much faster than
the EMI-scanner. It used a DEC
PDP11/34 minicomputer both to
operate the servo-mechanisms and to
acquire and process the images. The
Pfizer drug company acquired the
prototype from the university, along with rights to manufacture it. Pfizer then
began making copies of the prototype, calling it the "200FS" (FS meaning Fast
Scan), which were selling as fast as they could make them. This unit produced
images in a 256×256 matrix, with much better definition than the EMI-Scanner's
80×80.
Process:
X-ray slice data is generated using an X-ray source that rotates around the
object; X-ray sensors are positioned on the opposite side of the circle from the
X-ray source. The earliest sensors were scintillation detectors, with
photomultiplier tubes excited by (typically) cesium iodide crystals. Cesium
iodide was replaced during the 1980s by ion chambers containing high pressure
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Xenon gas. These systems were in turn replaced by scintillation systems based
on photo diodes instead of photomultipliers and modern scintillation materials
with more desirable characteristics. Many data scans are progressively taken as
the object is gradually passed through the gantry.
Newer machines with faster computer systems and newer software strategies
can process not only individual cross sections but continuously changing cross
sections as the gantry, with the object to be imaged, is slowly and smoothly slid
through the X-ray circle. These are called helical or spiral CT machines. Their
computer systems integrate the data of the moving individual slices to generate
three dimensional volumetric information (3D-CT scan), in turn viewable from
multiple different perspectives on attached CT workstation monitors. This type
of data acquisition requires enormous processing power, as the data are arriving
in a continuous stream and must be processed in real-time.
Once the scan data has been acquired, the data must be processed using a form
of tomographic reconstruction, which produces a series of cross-sectional
images. The most common technique in general use is filtered back projection,
which is straight-forward to implement and can be computed rapidly. However,
this is not the only technique available: the original EMI scanner solved the
tomographic reconstruction problem by linear algebra, but this approach was
limited by its high computational complexity, especially given the computer
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Pixels in an image
obtained by CT scanning
are displayed in terms of
relative radiodensity. The
pixel itself is displayed
according to the mean
attenuation of the
tissue(s) that it corresponds to on a scale from +3071 (most attenuating) to
-1024 (least attenuating) on the Hounsfield scale. Pixel is a two dimensional unit
based on the matrix size and the field of view. When the CT slice thickness is
also factored in, the unit is known as a Voxel, which is a three dimensional unit.
The phenomenon that one part of the detector cannot differentiate between
different tissues is called the "Partial Volume Effect". That means that a big
amount of cartilage and a thin layer of compact bone can cause the same
attenuation in a voxel as hyperdense cartilage alone. Water has an attenuation of
0 Hounsfield units (HU) while air is -1000 HU, cancellous bone is typically
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+400 HU, cranial bone can reach 2000 HU or more (os temporale) and can
cause artifacts. The attenuation of metallic implants depends on atomic number
of the element used: Titanium usually has an amount of +1000 HU, iron steel
can completely extinguish the X-ray and is therefore responsible for well-known
line-artifacts in computed tomograms. Artifacts are caused by abrupt transitions
between low- and high-density materials, which results in data values that
exceed the dynamic range of the processing electronics.
The greatly increased availability of CT, together with its value for an
increasing number of conditions, has been responsible for a large rise in
popularity. So large has been this rise that, in the most recent comprehensive
survey in the United Kingdom, CT scans constituted 7% of all radiologic
examinations, but contributed 47% of the total collective dose from medical X-
ray examinations in 2000/2001. Increased CT usage has led to an overall rise in
the total amount of medical radiation used, despite reductions in other areas. In
the United States and Japan for example, there were 26 and 64 CT scanners per
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1 million population in 1996. In the U.S., there were about 3 million CT scans
performed in 1980, compared to an estimated 62 million scans in 2006.
Blood Smear:
A blood film or peripheral blood smear is a microscope slide made from a drop
written by zamir blood, that allows the cells to be examined microscopically.
Blood films are usually done to investigate hematological problems (disorders
of the blood) and, occasionally, to look for parasites within the blood such as
malaria and filaria.
Preparation
Blood films are made by placing a drop of blood on one end of a slide, and
using a spreader slide to disperse the blood over the slide's length. The aim is to
get a region where the cells are spaced far enough apart to be counted and
differentiated.
The slide is left to air dry, after which the blood is fixed to the slide by
immersing it briefly in methanol. The fixative is essential for good staining and
presentation of cellular detail. After fixation, the slide is stained to distinguish
the cells from each other.
Wright's stain:
Wright's stain is a histologic stain that facilitates the differentiation of blood cell
types. It is used primarily to stain peripheral blood smears and bone marrow
aspirates which are examined under a light microscope. In cytogenetics it is
used to stain chromosomes to facilitate diagnosis of syndromes and diseases.
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It is named for James Homer Wright, who devised the stain, a modification of
the Romanowsky stain, in 1902. Because it distinguishes easily between blood
cells, it became widely used for performing differential white blood cell counts,
which are routinely ordered when infections are expected.
There are related stains known as the buffered Wright stain, the Wright-Giemsa
stain, and the buffered Wright-Giemsa stain, and specific instructions depend on
the solutions being used, which may include Eosin Y, Azure B, and Methylene
Blue (some commercial preparations combine solutions to simplify staining).
The May-Grünwald stain, which produces a more intense coloration, also takes
a longer time to perform.
basophil
lymphocyte
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