Development of A Tuberculosis Vaccine Seed: Construction of Resuscitation-Promoting Factor B DNA Vaccine and Its Expression in Vitro and in Vivo
Development of A Tuberculosis Vaccine Seed: Construction of Resuscitation-Promoting Factor B DNA Vaccine and Its Expression in Vitro and in Vivo
Development of A Tuberculosis Vaccine Seed: Construction of Resuscitation-Promoting Factor B DNA Vaccine and Its Expression in Vitro and in Vivo
Abstract
Background: Tuberculosis (TB) is a chronic infection disease caused by Mycobacterium tuberculosis (Mtb) and has a
high death-rate worldwide. Bacillus Calmette-Guerin is the only TB vaccine which is currently available with several
drawbacks, such as its different efficacy for different individuals, lack of protection for lung TB in adults and
subsequent reactivation which lead the research for novel TB vaccine approach. Resuscitation-promoting factor (rpf)
protein in Mtb is a protein cluster which play a big role in TB dormancy during latent infection. Member from this
cluster protein is rpfB which shows the greatest biological and immunological characteristics among other proteins in
the rpf family, now is widely explored as novel TB vaccine candidate. Methods: In this study, the rpfB gene of the Mtb
Beijing strain was amplified using PCR and then cloned into pcDNA3.1 plasmids. The ability of recombinant pcDNA-
rpfB to induce humoral immune response was tested through Balb/C mice immunization. Results: A positive
recombinant rpfB protein ~66 kDa was detected through western blot analysis using immunized mice sera. Meanwhile,
recombinant pcDNA-rpfB was transfected in to CHO-K1 mammalian cell line and recombinant rpfB antigen expression
was confirmed through immunostaining. Conclusions: Therefore, we have succesfully express the recombinant rpfB
proten of M.tb strain Beijing in mammalian expression system which proven to be antigenically induced humoral
immune response in mice model.
RpfB protein composition has shown that this protein is Mouse immunisation. Preparation of plasmid for
a membrane protein with B- and T-cell multiple immunization were done by growing E.coli DH5
epithopes.8,9 Previous research showed that the RpfB strain consist of recombinant plasmid or pCDNA3.1
protein has the highest biological and immunological itself in 100 mL LB medium with 100 g/mL ampicillin
characteristics among other the Rpf family proteins.10 at 37 oC overnight. The bacterial cells were harvested
Deletion of the M. tuberculosis rpfB gene causes a delay and then plasmid were isolated using a GeneJET
in reactivation in mice infected with M. tuberculosis. Plasmid Midiprep Kit (Thermoscientific). Concentration
Furthermore, mutations in this gene can reduce the of plasmid were adjust to 100 µg in 100 µL of TE
growth levels of the M. tuberculsis H37Rv strain. This buffer. Immunisation was performed on 6 to 8-week-old
makes RpfB a suitable antigen for the development of a male Balb/C mice. The mice were divided into three
new or as complementary TB vaccine.10 treatment groups containing six mice each. Mice were
injected with pcDNA3.1 plasmid only, Tris-EDTA (TE)
Meanwhile, the newest method in vaccine development or the pcDNA3.1-rpfB recombinant plasmid. Plasmids
uses DNA as a vaccination platform, known as a DNA were injected intramuscularly using a disposable syringe
vaccine. DNA vaccines consist of a bacterial plasmid with a 27 G needle on either the right or the left thigh
with a strong eukaryotic promoter gene (such as an muscle. A booster was performed on days 7, 14 and 21
enhancer element from cytomegalovirus), a gene that and blood was also drawn from the mice using the retro-
encodes an immunogenic protein, a polyadenylation orbital technique. Mice were anaesthetised via eter
signal and a transcriptional termination sequence.11 inhalation before blood samples were taken. The blood
Although there have been many studies of the RpfB sample volume was 130 µL, around 10% of the total
protein, to our knowledge, there has been no research blood volume. Fifteen days after the last immunisation,
into the development of a TB vaccine based on DNA blood was redrawn using the retro-orbital technique.
using the RpfB protein especially in Indonesia. Therefore, Blood collection after immunisation was performed to
this study aimed to construct a recombinant DNA-rpfB obtain serum that was expected to contain antibodies,
vaccine originating from the Beijing strain of M. which were then used in expression testing using
tuberculosis, local to Indonesia, and analyse its immunostaining and Western blot. All mice
expression capability in vitro, as well as the humoral experiments were approved through Ethical Approval
immune response generated, in order to provide No. 984/UN2.F1/ETIK/2016 from Ethical Committee
additional data to develop a new TB vaccine seed. Faculty of Medicine, Universitas Indonesia.
and incubated for 1 h with slow shaking at 2 rpm. times with 1× PBS (5 min each wash), added 200 µL of
Control membranes (anti-GST) were then washed three Nacalai substrate and incubated for 30 mins. The
times with 1× TBST (5 min each wash) at 2 rpm at substrate solution was removed and the cells were
room temperature. On the other hand, the membrane washed with 1× PBS and observed under a microscope
with mouse serum was resoaked in 1× TBST that using a 40× magnification.
contained 1% skimmed milk with immunoglobulin G
(IgG) horseradish peroxidase (HRP) mouse α-goat Results
antibody (Invitrogen) diluted to 1/5000, incubated for 1
h at room temperature and slowly shaken at 2 rpm. Recombinant pcDNA3.1-rpfB construction. rpfB
After that, the membrane was washed three times with gene was successfully amplified in size of 1101 bp using
1× TBST (5 min each wash). Finally, both membranes specific primers with EcoR1 and Hind III restriction
were soaked in TMB substrate (KPL) and incubated enzyme (data not shown), thus it was cloned in to
until the protein band was visible. The membrane was pcDNA3.1 expression plasmid through heat shock method
photographed for documentation purposes. in to competent E. coli DH5α bacteria. Following
transformation, a total 95 colonies were obtained, and
pcDNA3.1-rpfB expression analysis in mammalian 42 colonies were chosen randomly for PCR screening
cells. The pcDNA3.1-rpfB recombinant plasmid using insert and plasmid primers. Four recombinant
transfection into Chinese hamster ovary (CHO-K1) cells plasmid from positive colonies of PCR screening (data
was performed using the cationic lipid method using not shown) were further analysed using StuI restriction
lipofectamine LTX and Plus Reagent (Invitrogen). The enzyme. This enzyme has only one restriction site in
cells were grown in 24-well plates for 24 h in an pcDNA3.1 plasmid, thus recombinant plasmid with
incubator with 5% CO2 CHO-K1at 37 °C in MEM insert will show higher band (6517 bp) than the original
(Sigma) supplemented with 10% foetal bovine serum plasmid (5428 bp) as the result were depicted in Figure
(FBS). Cell growth inside the plate was observed until a 1. Furthermore, 2 out of 4 recombinant plasmids were
minimum of 80% confluence was reached. This cell chosen for sequencing analysis as the result showed that
concentration is optimum condition for transfection there were no mutations or insertions in the whole
process. recombinant DNA construction (sequence data was not
shown due to patent issue).
The transfection was performed in 1.5-mL eppendorf
tubes with 200 µL of OPTIMEM medium (Gibco). Humoral immune response test in mouse serum
First, 500 ng of the recombinant plasmid was added, (Western blot). To asessed the ability of pcDNA3.1-
then 0.3 µL of Plus Reagent was added into the mixture rpfB DNA vaccine to induce humoral immune response,
and incubated for 5 min at room temperature. Then, 1 western blot analysis was performed using pGEX-rpfB
µL of lipofectamine was added and incubated at room expression system and mice immunization sera. As
temperature for 30 min. The medium of the CHO-K1 depicted in Figure 2, native pGEX6p-1 plasmid is not
cells to be transfected was removed and the wells were producing any band in both induced and non-induced
washed three times with OPTIMEM medium. The IPTG (lane 1 and 2). Meanwhile, recombinant pGEX-
plasmid mixture was added to the CHO-K1cells and rpfB plasmid was shown to give positive single protein
incubated with 5% CO2 at 37 °C for 4 h. Afterwards, the band between 50 – 70 kDa, predicted as RpfB-GST
lipofectamine solution was removed and 200 µL of recombinant protein (66 kDa) in both induced and non-
MEM supplemented with 10% of FBS was added into induced IPTG (lane 3 and 4).
the wells and incubated overnight in a CO2 incubator at
37 °C. This result indicated that pcDNA3.1-rpfB DNA vaccine
is able to induce humoral immune response in mice
After 24 hours, the cells were washed three times with which recognize specifically in to RpfB protein since
1×phosphate-buffered serum (PBS) and then dried pcDNA3.1-rpfB DNA vaccine was constructed without
overnight at room temperature. The cells were then any additional tag protein correspond to the absence of
fixed by adding 500 µL of cold absolute ethanol and any band in native pGEX6p-1 lanes. The presence of
incubating at −20 °C for 30 mins. The ethanol was then positive band was shown in pGEX-rpfB non-IPTG
removed and the cells were dried at room temperature. induced (lane 3) may be the result of any basal
The fixed cells were stained by adding serum diluted to expression system that happen inside the cells which
1/100 from immunised mice into 200 µL of 1× PBS and allow the RpfB-GST protein expression. Thus, this
incubating for 1 hour at room temperature. This was expression was highly determined by the presence of
followed by three washes using 1× PBS (5 mins each IPTG inducer in the system as thicker target band
wash). Then, 200 µL of secondary antibody (IgG HRP protein was shown (lane 4). This western blot
mouse α-goat diluted to 1/500 with 1× PBS) was added analysis was also done using anti-GST monoclonal
into the cells and reincubated for 1 hour at room antibodies (Abcam) as control.
temperature. After that, the cells were washed three
rpfB (1089
rpfB (1089 bp) bp)
GST is a protein from Schistosoma japonicum. It is a
natural protein with a molecular weight of 26 kDa and
StuI (2053) consists of 220 amino acids. In general, GST is used to
pCMV BGH pA F1 ORI
produce a fusion protein, which is attached to the protein
SV40
at the end of the N-terminus.12 Western blot analysis
Ampicillin
ori
pCDNA 3.1
(5428 bp)
using anti-GST monoclonal antibodies resulting similar
band size (range at 50–70 kDa) on lane 3 and 4 and
ColE1 Neomycin
SV40 pA single band at range of 25–30 kDa on lane 2, indicating
the expression of protein fusion of RpfB-GST (data not
shown).
StuI (2053)
pCDNA 3.1-rpfB expression was confirmed in a mammalian expression
(6517 bp)
system using CHO-K1 cells and then analysed by
ColE1 SV40 pA Neomycin SV40 ori immunostaining the transfected cells. Immunostaining
was conducted using mouse serum that had been
(a)
immunised with pcDNA3.1-rpfB and confirmed to
contain anti-RpfB antibodies. The expression result
analysis is shown in Figure 3.Figure 3A is a negative
transfection control, where CHO-K1 cells were
plasmid from transfected using native pcDNA3.1 plasmid and stained
restriction with the immunized mice sera resulting no violet stained
cells observed under the microscope. In figure 3B, is a
positive control of transfected CHO-K1 cells with
pcD2ME (recombinant pcDNA3.1 plasmid containing
prM/E dengue virus gene expression system)13 and
stained with dengue patients sera resulting violet stained
cells. On the other hand, pcDNA3.1-rpfB was
transfected in to CHO-K1 cells and stained using
immunized mice sera which also resulting violet stained
(b)
cells (Figure 3C). Violet stained cells which observed is
Figure 1. a). Construction of Recombinant DNA Plasmid. the result of chemical reaction between conjugated
b). Electrophoresis of Stu1 Restriction Result secondary horseradish peroxidase enzyme and
(black arrow). M, Marker for 1 kb; Lane 1, diaminobenzydine substrate, indicating the recombinant
pcDNA3.1 Plasmid; Lane 2, pcDNA3.1 Plasmid rpfB antigen was expressed inside the cells.
Cut by Stu1 Restriction Enzyme; Lanes 3–6,
pcDNA3. 1-rpfB Recombinant Plasmid cut by
Stu1 Restriction Enzyme
M 1 2 3 4
70 kDa 66 kDa
50 kDa A B
C
Figure 3. CHO-K1 Cells Transfected with Recombinant
Plasmid. A, Negative Control (CHO-K1 Cells
Figure 2. Western Blot Result of RpfB Protein. M, Protein Transfected with the Empty pcDNA3.1 Plasmid); B,
Marker; Lane 1, GST without IPTG Induction; Positive Control (CHO-K1 Cells Transfected with
Lane 2, GST with IPTG Induction; Lane 3, Dengue prM-E Recombinant Plasmid); C, CHO-
RpfB-GST without IPTG Induction; Lane 4, K1 Cells Transfected with the pcDNA3.1-rpfB
RpfB-GST with IPTG Induction Recombinant Plasmid