TOPIC: Biological Molecules AIM: Identification of Biochemicals in Pure Form
TOPIC: Biological Molecules AIM: Identification of Biochemicals in Pure Form
APPARATUS :
volume of Benedict’s was added. It was brought gently to the boil and
hydrochloric acid was added. It was boiled for one minute. With sodium
KI solution was added. Alternatively the latter was added to the solid form
of starch.
3.LIPIDS – EMULSION TEST
1. 2cm3 fat or oil was added to a test – tube containing 2 cm3 of absolute
AND
RESULTS
IMAGE 1 : Show My Lab – Partner and Me Holding our test – tubes
after the experiment. The test – tube that I am holding shows the results for
lipids – Emulsion Test that forms a cloudy white suspension and the other test –
tube shows the Starch – Iodine Test that forms a blue – black colouration. The
test – tube Ruben is holding shows the results for Carbohydrates – Reducing
Sugars that finally forms a brick – red precipitate and the other test – tube
shows the Proteins - Biuret Test that finally changes into a mauve or purple
colouration.
IMAGE 2 : Shows the results of the Carbohydrates – Reducing
Sugars which involves monosacharides. The initial blue colouration of the mixture
turns green then yellowish and finally forms a brick – red precipitate.
IMAGE 3 : Shows the result of Lipids that is the Emulsion Test. It forms a cloudy
white suspension.
IMAGE 4 : Shows the test – tube wit a pH Paper in it. This test –
tube shows the result for the Carbohydrates that is the Non – Reducing Sugars. A
Benedict’s Test was carried out and a brick – red precipitate was finally formed.
The test – tube with the red colouration shows the Benedict’s Test for reducing
The test tube with the blue – black colouration shows the Iodine Test to test the
presence of Starch. While, the test – tube with the white colouration shows the
Emulsion Test that is to test the presence of Lipids. It finally forms a cloudy white
suspension.
IMAGE 7 : Shows the results of all the test that was carried out in the
laboratory. The test –tube with the blue – black colouration shows the test for
Iodine Test. It shows the presence of starch. The test – tube with the brick – red
precipitate shows the Benedict’s Test for non – reducing sugars. The initial blue
colouration of the mixture turns green then yellowish and finally form a brick – red
precipitate. The white colouration in the test – tube shows the Emulsion Test that
was carried out, a cloudy white suspension was observed. It used to test lipids. The
test – tube with the brick – red precipitate wit the pH Paper in it shows the
Benedict’s Test that was carried out on non – reducing sugars. The test tube with
the mauve colour at the left shows the Biuret Test to test the presence of
proteins.
ADDITONAL
NOTES
CARBOHYDRATES
A carbohydrate is an organic compound general formula Cm(H2O)n, containing the
Carbohydrates can be divided into three main groups based on their molecular
structures :
MONOSACCHARIDES
1. Monosaccharides are basic subunits for the formation of more complex
with many hydroxyl groups added, usually one on each carbon atom that is
with three carbon atoms are called trioses, those with four are called
tetroses, with five are called pentoses, six are hexoses. These two systems
4. Both the functional groups, either aldehyde or ketone have reducing sugars
6. All monosaccharides have a sweet taste, dissolve easily in water and form
atoms.
MAJOR FUNCTIONS OF MONOSACCHARIDES
MONOSACCHARIDES FUNCTIONS
Trioses Important Intermediates During Respiration And
Photosynthesis
DISACCHARIDES
1. The general formula for a disaccharide is Cm(H2O)n, . A disaccharide is
molecule and one D-fructose molecule. The systematic name for sucrose,
How they are linked together: the oxygen on carbon number 1 (C1) of α-D-
DISACCHARIDE FUNCTIONS
MALTOSE ( MALT SUGAR ) Respiratory substrate
sucrose.
POLYSACCHARIDES
1. Polysaccharides are polymers that are formed from the condensation
'animal starch'.
in the cell walls of plants and other organism. It is a long straight chain
BENEDICT’S TEST
Benedict's reagent is also called Benedict's solution or Benedict's test.
Benedict's reagent is used as a test for the presence of reducing sugars. This
includes all monosaccharides and the disaccharides, lactose and maltose. All
monosaccharides are reducing sugars. They all have a free reactive carbonyl
group. Some disaccharides have exposed carbonyl groups and are also reducing
sugars. Other disaccharides such as sucrose are non-reducing sugars and will not
react with Benedict's solution. Starches are also non-reducing sugars, Benedict's
test will detect the presence of aldehydes and alpha-hydroxy - ketones, including
aldoses glucose and mannose by the base in the reagent. Benedict's reagent
contains blue copper ( II ) ions (Cu 2+) which are reduced to copper ( I ) (Cu +). These
are precipitated as red copper ( I ) oxide which is insoluble in water. The copper
sulfate (CuSO4) present in Benedict's solution reacts with electrons from the
aldehyde or ketone group of the reducing sugar to form cuprous oxide (Cu 2O), a
red-brown precipitate.
++ --
CuSO4 Cu + SO4
The final color of the solution depends on how much of this precipitate
was formed, and therefore the color gives an indication of how much
IODINE TEST
The Iodine test is used to test for the presence of Starch. Iodine
with starch producing a blue black color. This reaction is the result of the
formation of polyiodide chains from the reaction of starch and iodine. The amylose,
or straight chain portion of starch, forms helices where iodine molecules assemble,
helices and iodine molecules are unable to assemble, leading the color to be of an
carbohydrate units, the blue-black color is not produced. Therefore, this test can
determine completion of hydrolysis when a color change does not occur. Iodine
solution will also react with glycogen, although the color produced is browner and
chemical test used for detecting the presence of peptide bonds. In the presence
solution. Several variants on the test have been developed. The Biuret reaction can
be used to assay the concentration of proteins because (for most proteins) peptide
bonds occur with approximately the same frequency per gram of material. In spite
of its name, the reagent does not in fact contain biuret ((H2N-CO-)2NH). The test
is so named because it also gives a positive reaction to the peptide bonds in the
biuret molecule.
LIPIDS : OIL AND FATS
oxygen. However the ratio of oxygen atoms to hydrogen atoms in lipid molecule is
much lower than 1 : 2 ratio found in carbohydrates. Lipids are a broad group of
phospholipids, and others. The main biological functions of lipids include energy
molecules.
Lipids may be divided into groups. There are three main groups
that are commonly found in plant and animal cells are triglycerides (fats and oils),
or amphiphilic small molecules. The amphiphilic nature of some lipids allows them to
environment. Biological lipids originate entirely or in part from two distinct types
Glycerolipids
Glycerophospholipids
Sphingolipids
Saccharolipids
Polyketides
can dissolve in organic solvents such as avetone, ether, chloroform, and alcohol.
FATS AND OILS
The most familiar lipids are found in fats and oils. Fats consist of a wide
group of compounds that are generally soluble in organic solvents and largely
insoluble in water. Chemically, fats are generally triesters of glycerol and fatty
acids. Fats may be either solid or a liquid at room temperature, depending on their
structure and composition. Fats are animal origin. Although the words "oils", "fats",
and "lipids" are all used to refer to fats, "oils" is usually used to refer to fats that
are liquids at normal room temperature, while "fats" is usually used to refer to fats
that are solids at normal room temperature. "Lipids" is used to refer to both liquid
and solid fats, along with other related substances. Fats and oils or known as
triglycerides are esters since they they are formed from condensation of one
molecule of alcohol ( glycerol ) and three molecules of fatty acid. This reaction is
known as esterification. The bonds form between the glycerol and fatty acids are
Unsaturated Fats
saturated fatty acid radicals. There are several kinds of naturally occurring
saturated fatty acids, which differ by the number of carbon atoms, ranging from 3
no double bonds between the carbon atoms of the fatty acid chain and are thus
double bond within the fatty acid chain. A fat molecule is monounsaturated if it
contains one double bond, and polyunsaturated if it contains more than one double
bond. Where double bonds are formed, hydrogen atoms are eliminated. Thus, a
saturated fat has no double bonds, has the maximum number of hydrogens bonded
energy, thus an unsaturated fat molecule contains somewhat less energy (i.e.,
fewer calories) than an equivalent amount of saturated fat. The greater the
degree of unsaturation in a fatty acid ( the more double bonds in the fatty acid ).
PROTEINS
AMINO ACIDS
chain is a polymer consisting of many units of amino acids linked together through a
condensation reaction. All amino acids share the basic structure but differ in their
side chains, ( -R ). Amino Acids are amphoteric. This is because each amino acid
consists of both the acidic carboxyl group ( -COOH ) and the basic amino group
amino acids arranged in a linear chain and folded into a globular form.
The amino acids in a polymer are joined together by the peptide bonds
between the carboxyl and amino groups of adjacent amino acid residues. Each
general, the genetic code specifies 20 standard amino. The amino acid is classified
into four groups based on the properties of their side chains. Amino acids have
hydrocarbons as side chains are non – polar. Protein molecules that consist of a
large amount of such amino acids are insolouble and non – reactive. Such proteins
usually form a structural protein for example, collagen. Amino acids with polar R
The presence of amino acids increases the soloubility of the protein and
enables hydrogen bonding between polypeptide chains. Basic or acidic amino acids
produce passively or negatively charged ions. These ions are strongly hydrophilic.
Proteins with a high content of these amino acids, such as globular proteins are
solouble in water.
FORMATION OF POLYPEPTIDES
undergo further reactions with other amino acids since it has a free amino
group at one end ( N – Terminal ) and free carboxyl group at the other end
( C – Terminal ). When one more amino acidis linked to the dipeptide, a
tripeptide is formed.
Essential amino acids are "essential" not because they are more important
to life than the others, but because the body does not synthesize them, making it
essential to include them in one's diet in order to obtain them. In addition, the
amino acids arginine, cysteine, glycine, glutamine, histidine, proline, serine and
tyrosine are considered conditionally essential, meaning they are not normally
required in the diet, but must be supplied exogenously to specific populations that
Non essential amino acids are amino acids that can be produced in our body.
Their uses and functions in our body are equally as important as the limiting amino
acids. The difference is that those kind of amino acids can be found in our food.
acids. Included is a some of the functions and benefits and side effects (if any) of
the amino acids. For example Alanine removes toxic substances released from
PROTEIN STRUCTURES
is not yet a protein. A protein is a polypeptide chain that has attained a unique,
three –dimensional shape. Some proteins consist of a single polypeptide chain that
undergoes folding and coiling. These proteins are called monomeric proteins. Many
1. Primary Structure
2. Secondary Structure
3. Tertiary Structure
4. Quaternary structure
PRIMARY STRUCTURE
The amino acid sequence of the peptide chains. .The primary structure is
held together by covalent or peptide bonds, which are made during the process of
protein. The two ends of the amino acid chain are referred to as the C-terminal
end or carboxyl terminus (C-terminus) and the N-terminal end or amino terminus
SECONDARY STRUCTURE
sheet), which are locally defined, meaning that there can be many different
The polypeptide chain is coiled to form a simple alpha helix. The loops
of alpha helix can be extended just like wires. The alpha helix is
TERTIARY STRUCTURE
Three-dimensional structure of a single protein molecule, a spatial
folded and compacted polypeptide chain. It is the way alpha helix is folded
QUATERNARY STRUCTURE
PROPERTIES OF PROTEINS
All globular proteins are amphoteric, they exhibit both base and acid.
Proteins are easily damage by heat ( temperatures greater than 40 C ) due
CLASSIFICATION OF PROTEINS
1. Fibrous Proteins
2. Globular Proteins
All globular proteins have tertiary structures and some also
antibodies.
GLOBULAR PROTEINS
Structure
1. SIMPLE PROTEINS
Simple proteins are pure proteins that do not contain any other
2. CONJUGATED PROTEINS
Sugars such as glucose and fructose. Here, the Benedict’s Test was carried out.
The colour change was observed. The initial blue colouration of the mixture turns
green, then yellowish and finally form a brick – red precipitate. The Benedict’s
solution reduces soluble blue copper sulphate with copper ( II ) ions to insolouble
red – brown copper oxide containing copper ( I ). The carbohydrate test was also
carried out for Non – Reducing sugars such as sucrose. The brick - red precipitate
The test for starch or known as the Iodine Test. Here, a blue – black
colouration was formed. The polyiodide complex is also formed with starch. Next,
the test for lipids such as oils or known as the Emulsion Test was carried out. A
cloudy white suspension was observed. This is because lipids are immiscible with
water. Thus, adding water to alcohol results in tiny lipid droplets in water which will
give a white appearance. The final test that was carried out was to the test for
The carbohydrate test that was carried out for Reducing Sugars
consist of glucose and fructose. The solution of the reducing sugar initial was blue
in colour then turns green, yellowish and finally turns into a brick – red precipitate.
The Benedict’s Test was carried out during the experiment. The Benedict reagent
carbohydrate test for Non – Reducing sugars such as sucrose was also carried out.
Here, Benedict’s Test was also carried out. The dissacharide will be hydrolysed to
its monosaccharides by boiling with hydrocholoric acid. Thus, this will finally give
The Iodine Test was carried out to test the presence of starch. A
blue – black colouration was formed. Besides, a polyiodide complex is formed with
starch. The starch becomes a paste and increases further with viscosity. Next, the
Emulsion Test was carried out to show the presence of lipids. The fat or oil was
first dissolved in alcohol. A cloudy white suspension was formed. This is because
the lipids are immiscible with water. Thus, adding water to a solution of lipid in
alcohol results in an emulsion of tiny droplets in water which will give a white,
opalescent appearance. Finally, Biuret Test was carried out to test the presence of
colouration complex is
Iodine Test
formed
Proteins : A mauve or
purple
Biuret Test
colouration