Biosensors Electrochemical 2011
Biosensors Electrochemical 2011
Biosensors Electrochemical 2011
Author Manuscript
Expert Opin Med Diagn. Author manuscript; available in PMC 2012 September 1.
06032
Abstract
NIH-PA Author Manuscript
Importance of the fieldDevices for the reliable detection of panels of biomarker proteins
facilitated by magnetic bead-based technologies have the potential to greatly improve future
cancer diagnostics. The reason for this review is to highlight promising research on emerging
procedures for protein capture, transport and detection featuring magnetic particles.
Areas covered in this reviewThe review covers applications of magnetic particles in
protein immunoassays in emerging research and commercial methods, and stresses multiplexed
protein assays for reliable future cancer diagnostics. Research literature over the past dozen years
has been surveyed and specific examples are presented in detail.
Expert OpinionMagnetic particles are important components of emerging protein detection
systems. They need to be integrated into simple inexpensive systems for accurate, sensitive
detection of fully validated panels of biomarker proteins to be widely useful in clinical cancer
diagnostics.
Keywords
magnetic particles; proteins; cancer biomarkers; off-line protein capture; cancer diagnostics
1. Introduction
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There is concern that detection of an indolent form of prostate cancer that is undifferentiated
by the PSA test from more serious types leads to unnecessary treatment. Failure to
distinguish between indolent and more aggressive forms of cancer is also a common
problem with other clinically used single biomarkers, including cancer antigen 125 for
ovarian cancer, carbohydrate antigen 199 for pancreatic cancer, and carcinoembryonic
antigen for colon cancer [8]. Thus, panels of cancer biomarker proteins will almost certainly
be more valuable for reliable cancer detection and therapeutic monitoring, and this has been
demonstrated experimentally [3,4,7,10,11].
Currently several biosensor technologies are employed as diagnostic tools for protein
detection [12]. Most technologies employ nanomaterials such as gold nanoparticles,
quantum dots, carbon nanotubes and magnetic particles to improve detection sensitivity
[13]. Low detection limits achieved using nanomaterials can facilitate early cancer detection
and accurate prognosis. Virtually any protein detection method that is sensitive enough and
can analyze very small samples can be used to measure cancer biomarker proteins in serum,
and there is no standard approach at present. For this reason, this article includes any method
that could potentially be used for the detection of cancer biomarker proteins.
A method for determining multiple proteins in the same sample must be able to selectively
fish out a set of low concentration protein analytes from a sea containing thousands of other
proteins. It must then be able to selectively differentiate the individual analyte proteins and
measure them with accuracy and high sensitivity. Magnetic beads conjugated with
antibodies or other protein capture agents provide a simple but effective way to achieve
these analytical operations. Typically, labeled magnetic beads with antibodies attached are
added to a fluid sample, and the sample is agitated so that specific proteins are captured by
antibodies on the relevant bead. Magnetic separation, either manual or automated, is used to
remove the protein-laden beads from the sample, and wash away any interfering
biomolecules. Labels associated with the magnetic beads are then detected in a selective
way, either by using different labels for different proteins in a bar-code like approach, or by
first sorting beads with the same labels based on the proteins they have captured, then
detecting labels on each type of bead.
Magnetic beads have high surface areas per unit volume, good stability, and enable fast
kinetic processes involving solution species compared to bulk solid surfaces [16,17]. A great
advantage of magnetic beads, as opposed to non-magnetic nanoparticles, is their ease of
manipulation with simple, inexpensive magnets. Very efficient isolation of analyte proteins
from biomedical samples can be achieved outside of the detection system, so that detectors
need never be exposed to the complex biological sample matrix.
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Magnetic beads enable magnetic purification and enrichment of proteins from complex
serum samples. For example, magnetic beads coated with antibodies are effectively utilized
in quantification of biomarker candidates in plasma at ng mL-1 levels by mass spectrometry
(MS) [18]. This approach enabled identification of protein biomarker candidates for head
and neck cancer [19], autistic spectrum disorder [20] and other diseases. High throughput
lectin coated magnetic particles were used to isolate and analyze glycosylated proteins
utilizing LC/MS for biomarker discovery[21].
The present article describes the utility of magnetic beads in a variety of methods developed
to achieve sensitive protein detection. Magnetic particle-enabled protein assays constitutes a
subset of the larger research area of interfacing nanoparticles or microparticles with protein
bioanalyses [22]. In the next section, we discuss sources and properties of magnetic beads.
We then present sections addressing uses of magnetic beads interfaced with different types
of detectors. Closing sections offer a summary and our opinions.
Many types of magnetic beads are now commercially available. Paramagnetic beads are the
most useful for systems requiring magnetic separation and transport as they become
magnetic in an applied magnetic field, but have zero magnetization in the absence of a
magnetic field. These beads are often called superparamagnetic [23]. Ferromagnetic beads
feature permanent magnetism.
The most common examples of paramagnetic beads have magnetic iron oxide cores and
non-magnetic polymer shells featuring surface chemical functionality for attachment of
biomolecules (Figure 1). The magnetic core can also consist of a collection of paramagnetic
nanoparticles embedded in a polymer core. Beads with sizes in the range 100 nm to 50 m
in diameter are commercially available with variability in size <5 %. Suppliers include
Solulink, Invitrogen, Bangs Labs, Merck, and others. Bead size determines sedimentation
rate and mobility in solution. The outer polymer shell serves to add surface functional
groups to the bead and protects the metal oxide core from external media. The outer shell
can also consist of agarose, cellulose, porous glass or silica. Surface functional groups
include carboxyl, amine, epoxy, hydroxyl, tosyl, and N-hydroxy succinate (NHS)-activated.
Beads are also available with surface molecules such as streptavidin, biotin, protein A,
protein G, IgG, IgE and IgM (Figure 1). Functional groups can be activated for coupling
using the familiar EDC-coupling chemistry for carboxylates or glutaraldehyde for amines to
attach to appropriate functional group of biomolecules [7]. Surface tosyl-, NHS-activated
and epoxide groups can be used to attach biomolecules directly without cross-linking agents.
Particles precoated with streptavidin can capture biotin labeled biomolecules. Protein A
coated particles can selectively bind to Fc regions of antibodies for orientated
immobilization.
Beads with paramagnetic nanoparticles embedded in a polymer core matrix are often labeled
superparamagnetic, but may feature multidomain magnetic structures with remnant
magnetic moments [23]. This can cause some degree of magnetic clustering due to induced
magnetism in neighboring particles. At room temperature, true paramagnetic beads of iron
oxide need to have radii in the low nm range. Thus, commonly used beads of 0.13 m
diameter featuring polymer-embedded iron oxide nanoparticle cores may show some
clustering in dispersions due to magnetic interactions between particles.
In the next section, we present methods utilizing magnetic bead-based assays for enhanced
protein detection (Figure 2) that may eventually be suitable for cancer diagnostics.
Specifically emphasis is on high sensitivity detection of multiple proteins, and methods
include magnetic field sensors, electrochemistry, surface plasmon resonance,
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Willner and Katz summarized the use of magnetic beads for controlling magneto-switchable
bioelectrocatalytic processes applicable to immunosensors [33]. For example, they reported
enhanced bioelectrocatalytic oxidation of glucose by soluble glucose oxidase by using
ferrocene-functionalized magnetic particles on a rotating magnetic electrode, where
ferrocene acts as the mediator [34]. Wang et al demonstrated ultrasensitive detection using
anti-IgG coated magnetic beads that captured IgG followed by addition of DNA/anti-IgGfunctionalized polystyrene beads to form a sandwich immunocomplex [35]. Oligonucleotide
labels that corresponded to IgG concentration were released in alkaline solution, depurinated
by acid, and the free guanine released was measured by stripping potentiometry. Using
similar immunoassays, carbon nanotubes coated with thousands of alkaline phosphatase
enzymes were employed to achieve an ultralow detection of 67 aM IgG using square wave
voltammetry [36]. Tang et al. developed an electrochemical magnetic-controlled
microfluidic device for the multiplexed detection of 4 tumor markers, -fetoprotein (AFP),
carcinoembryonic antigen (CEA), cancer antigen 125, cancer antigen 15-3 with DLs < 0.5
ng mL1 [30]. Sarkar et al reported electrochemical detection of f-PSA using magnetic
beads on a screen-printed sensor [37]. Magnetic bead protein capture was done in a cuvette,
then, the beads were transferred to the sensor surface. The amperometric response of HRP
labels on the bead was developed using hydrogen peroxide to give a DL < 0.1 ng mL1 fPSA.
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in which the target protein is captured by both antibody modified magnetic beads and AuNconjugated antibody was attracted onto ferrocenyl-tethered dendrimer (Fc-D) modified
indium tin oxide electrode using an external magnet. AuN in the immunocomplex produces
p-aminophenol from the catalytic reduction of p-nitrophenol in the presence of NaBH4. The
p-aminophenol is electrochemically oxidized to p-quinone imine via electron mediation by
ferrocene, and p-quinone imine is then reduced back to p-aminophenol by NaBH4. The
redox cycle amplifies the signal.
Aptamers are short sequences of nucleotides designed to be specific for target proteins, and
have also been used as capture agents and labels for sensitive protein detection. Aptamer
based assays include magnetic particles as solid supports, and polymerase chain reaction
(PCR), electrochemical and fluorescence for aptamer label detection. Electrochemical
aptamer based sandwich assays have been developed to detect C-reactive protein (CRP)
[41], thrombin and activated protein C (APC) [42].
3.2 Optical detection: Electrochemiluminescence
Magnetic bead methods similar to that describe above are the basis of protein detection
instruments such as Roches ELECYS, Igens Origen and BioVeriss M-Series. Commercial
measurement systems and kits are available for up to 10 proteins. Fluid handling systems
assist transport of magnetic bead and ECL labels to the detecting electrodes in 96-well
plates. Measured ECL light intensity corresponds to the amount of protein present in the
complex medium. Commercial systems have typical DLs of 110 pg mL1 for most
proteins, and usually require a non-reusable 96-well plate for each assay. ECL with RuBPY
labels has been used for the detection of cancer biomarkers proteins such as
adrenocorticotropic hormone [44], cardiac troponin T [45], parathyroid hormone (PTH)
[46], C-reactive protein [47,48] and alpha-fetoprotein (AFP) [49]. ECL using 100 nm
RuBPY-silica nanoparticle labels has been used for the detection of PSA in cancer patient
serum [50].
3.3 Magneto-PCR based assay
Wacker et al. reported a magneto-IPCR (immuno-PCR) utilizing a sandwich
immunocomplex formed on magnetic particles with antibody conjugated DNA fragment as
labels. The labels are detected using real time PCR to obtain the protein concentration.
Magneto-IPCR was used to detect hepatitis B surface antigen (HBsAg) with a detection
limit of 320 pg mL-1 [51].
Csordas et al. reported a micromagnetic aptamer PCR (MAP) technology to detect protein
biomarkers in serum samples [52]. This technique utilized antibody-coated magnetic
particles which capture biomarker proteins in serum followed by binding of a specific
aptamer. Then, this complex was magnetically separated and the aptamer was amplified
using PCR to provide high sensitivity detection. Platelet-derived growth factor-BB (PDGF-
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BB) over the range 62 fM to 1 nM was detected using MAP technology in complex serum
samples. In a related approach, Tennico et al. used sandwich assays to detect thrombin
utilizing aptamer coated magnetic beads, quantum dot labels, and fluorescence microscopy
[53].
Since biological applications of giant magnetoresistance (GMR) sensors were first reported
over a decade ago [54], several magnetic field protein biosensors [5558] with magnetic
bead labels have been described. Detection has been done by magnetic field sensors
including GMRs, superconducting quantum interference devices (SQUID) [59] and Hall
effect [60]. GMR detects magnetic bead labels by measuring the resistance change of a
conducting sensor featuring alternate layers of ferromagnetic and non-magnetic materials in
nm thicknesses under applied current and magnetic field. In a typical example, the
conducting sensor layer has attached primary antibodies to capture the protein of interest
from the sample. After protein capture in this so called sandwich immunoassay, the
surface is washed and a biotin-labeled secondary antibody is added to bind to the target
protein. This is followed by incubation with streptavidin-coated superparamagnetic bead
labels that bind strongly to biotin on the secondary antibody (Figure 3). Detection of
proteins is achieved by measuring the change in resistance of the conducting layer due to the
superparamagnetic bead labels. This method provides high sensitivity at low sensor cost and
low background noise.
Palma et al. used streptavidin coated magnetic beads in a magnetic immunosensor to detect
stroke and minor head injury marker S100 with a detection limit of 27 pg mL1[61]. The
Naval Research Laboratory (NRL) developed a GMR sensor chip array with 64 sensors
called the bead ARray Counter (BARC) measuring biomolecules by detecting
superparamagnetic labels [54]. Mulvaney et al. reported magneto-electronic based detection
of proteins in complex matrices utilizing magnetic bead labels and fluidic flow
discrimination (FFD) [62]. Beads captured on the sensor surface were measured using
microscopy and BARC sensors. FFD lowered the non-specific binding and increase the
sensitivity of detection for proteins. A 64 sensor-GMR array [63,64] enabled multiplexed
detection of proteins biomarkers in clinical samples utilizing magnetic nanoparticle labels
with sensitivities in femtomolar and attomolar ranges. Eight protein biomarkers associated
with various cancers were detected using this sensor, with insensitivity to matrix effects. The
small size and portability of GMR sensor arrays have fueled interest in this approach for
protein biosensing at point of care [65].
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Nanostructured amperometric immunosensors were used for PSA in serum employing HRPlabeled magnetic beads with DL of 0.5 pg mL1 [69]. Tang et al. reported signal
amplification using thionine doped magnetic gold nanospheres and HRP to detect
carcinoembryonic antigen [70] at 5 pg mL1. Sandwich immunoassay was fabricated on
carbon fiber microelectrode modified with anti-CEA/protein A/nanogold particles.
Electrochemical signals were developed by the reduction of H2O2 by labeled gold
nanospheres. Ambrosi et al. reported magnetic microbead based electrochemical
immunoassay utilizing gold nanoparticle labels for signal enhancement with a detection
limit of 260 pg mL1 of human IgG [71].
4.4 Other detection method: Biobarcode assays
Magnetic beads have been used extensively as solid supports to covalently link
biomolecules such as antibodies, DNA and enzymes. Antibody coated magnetic beads
provide stronger binding for target proteins by using mechanical agitation. Ultrasensitive
detection of several proteins in serum has been achieved using biobarcode-based detection
utilizing magnetic beads as solid supports [6]. In this approach, gold or silica nanoparticles
act as carriers for polynucleotide strands of known-sequence that serve as biobarcodes. The
barcode is the sequence of nucleobases in the polynucleotide label that can be read by a
complimentary polynucleotide strand. Nam et al. used primary antibody coated magnetic
beads to capture target antigen followed by washing and then binding of secondary
antibody-gold nanoparticles [72] or silica microparticles [73] with the biobarcodes attached.
After magnetic separation of the immunocomplex, the biobarcodes are released by using
high temperature and low salt concentration, and detected using a scanometric or
colorimetric assay. The polymerase chain reaction (PCR) can be used to enhance sensitivity
to very high levels. Biobarcode assays can provide attomolar-level detection of protein
biomarkers in serum. Multiplexed detection of prostate specific antigen (PSA), human
chorionic gonadotropin (HCG) and -fetoprotein (AFP) was achieved with this approach
utilizing 3 different antibody coated magnetic beads with detection limits of 170 fM in
diluted serum [74].
5. Summary
Using magnetic particles for protein capture, manipulation, transport, and labeling has led to
methods that detect cancer biomarker proteins at clinically relevant serum levels and below.
GMR and SPR detectors benefit from the inherent signal enhancement of the magnetic
particle itself, which does not need additional labels. Approaches such as biobarcode assays
and nanostructured microfluidic arrays with massively labeled particles can detect proteins
well below pg mL1 levels in serum. Off-line capture of the analyte proteins by magnetic
particles ensures that the detectors need never be exposed to the sample, eliminating many
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possible interferences and greatly lowering non-specific binding (NSB) which is a major
source of background in immunoassays.
Despite the above successes, only a small fraction of the methods discussed in this article
have been validated using cancer patient samples. However, the few that have been tested
with patient samples have demonstrated good accuracy and sensitivity. In addition, cancer
diagnostics applications using protein biomarkers will require accurate detection of not a
single protein, but panels of 410 biomarkers for each cancer. Much less progress has been
made on this front, with approaches to multiplexed protein detection systems for clinical or
POC use just beginning to appear in research publications. Currently no commercial devices
for multiplexed cancer biomarker protein detection are suitable for POC use. Commercial
magnetic bead-based methods utilizing ECL seem promising for laboratory-based
multiplexed protein determinations, but are relatively expensive and technically demanding.
6. Expert opinion
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Article Highlights
Paramagnetic beads are most useful for protein capture, separation, and
transport, but may have remnant magnetism leading to some degree of
aggregation.
Mani et al.
Page 14
Expert Opin Med Diagn. Author manuscript; available in PMC 2012 September 1.
Mani et al.
Page 15
Figure 2.
Schematic representation of the use of magnetic particles (MP) as supports (I and III) and
labels (II) for protein biomarker measurements using different detectors.
Mani et al.
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Figure 3.
Mani et al.
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Figure 4.
Illustration of off-line capture of protein analytes using labeled magnetic beads, a technique
that can be used with nearly any type of detector. Magnetic beads with bound protein are
selectively captured on the sensor surface, while beads without analyte are washed away.
Magnetic and SPR methods require only the magnetic bead as a label
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Figure 5.
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Table 1
Part A. Protein detection limits for methods using magnetic particles as labels or platforms
Part B. Protein detection limits
Biomarker
Off-line capture?
Detection limits
Coating of particles
References
27 pg mL1
61
No
mL1
1 pg
each
biomarker
50 nm streptavidin coated
63
No
50 nm streptavidin coated
64
No
25 ng mL1 in
buffer
0.51 m streptavidin
coated
75
S100 protein
Bio-barcode assay
Yes
170 fM in serum
1 m tosyl particles
76
Yes
100 aM in CSF
1 m polyamine
76
Interleukin-2 (IL-2)
Yes
30 aM in serum
1 m amine-functionalized
77
Yes
3 aM in buffer
1 m amine-functionalized
72
No
25 pg mL1
50 nm streptavidin
66
Yes
100 pg mL1 in
stool
50 nm streptavidin
67
Yes
10 fg mL1 in
serum
1 m tosylated
68
Electrochemical assay
0.83 m streptavidin
36
30
3 m tosylated
37
No
1 m carboxyl functionalized
69
Yes
fM levels
Streptavidin coated
38
Protein G coated
39
IgG
Yes
No
<0.5 ng
Free (f)-PSA
Yes
PSA
IgG, BSA, 2-microglobulin, C reactive protein
Prostate specific antigen (PSA)
Carcinoembryonic antigen
Human IgG
Mouse IgG
Yes
No
Yes
Yes
67 aM
1.4 ng
mL1
mL1
mL1
20 nm gold nanosphere
70
260 pg
mL1
Streptavidin coated
71
100 ag
mL1
1 m Tosyl activated
40
5 pg
Yes
1.05 m streptavidin
41
Thrombin
Yes
0.5 nM in buffer
1.05 m streptavidin
29
Yes
1 nM
Protein G coated
42
51
Magneto-PCR
Hepatitis B surface antigen (HBsAg)
Yes
Expert Opin Med Diagn. Author manuscript; available in PMC 2012 September 1.
Mani et al.
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Yes
1 m streptavidin
52
350 nm streptavidin
78
62 fM to 1 nM serum
Electrochemiluminescence (ECL)
CEA protein
No
1.6 pg mL1
L1
2+
Yes
Yes
1 m streptavidin-
47
Human CRP
Yes
2.8 m streptavidin-
48
0.5 ng
Ru(bpy)3
ECL label
44