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Glossary of Organic Class Names: and (2001 Values)

The document provides a glossary of terms related to organic chemistry nomenclature and biochemical nomenclature. It includes terms such as Hantzsch-Widman Nomenclature, non-standard valence states, phane nomenclature, spiro nomenclature, natural product nomenclature, fullerene nomenclature, polymer nomenclature, amino acid nomenclature, nucleic acid nomenclature, carbohydrate nomenclature, lipid nomenclature, steroid nomenclature, and more. The glossary contains hyperlinks to further details on many of the nomenclature systems.

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0% found this document useful (0 votes)
192 views9 pages

Glossary of Organic Class Names: and (2001 Values)

The document provides a glossary of terms related to organic chemistry nomenclature and biochemical nomenclature. It includes terms such as Hantzsch-Widman Nomenclature, non-standard valence states, phane nomenclature, spiro nomenclature, natural product nomenclature, fullerene nomenclature, polymer nomenclature, amino acid nomenclature, nucleic acid nomenclature, carbohydrate nomenclature, lipid nomenclature, steroid nomenclature, and more. The glossary contains hyperlinks to further details on many of the nomenclature systems.

Uploaded by

everforu
Copyright
© Attribution Non-Commercial (BY-NC)
We take content rights seriously. If you suspect this is your content, claim it here.
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Download as DOCX, PDF, TXT or read online on Scribd
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Glossary of Terms in

Basic Terminology of
Glossary of Organic Class Names Physical Organic
Stereochemistry
Chemistry
Hantzsch-Widman Non-standard Valence Cyclic compounds with
Nomenclature for States (Lambda contiguous formal double bonds
Heteromonocyclic Rings Convention) (delta Convention)
Fused Ring Nomenclature Phane Nomenclature Phane Nomenclature Part II New
Glossary of Terms in Glossary of Medicinal Nomenclature of Isotopically
Bioinorganic Chemistry Chemistry Terms Modified Compounds (Section H)
IUPAC Atomic Weights Von Baeyer
Spiro nomenclature
and Periodic Table nomenclature
(2001 values) New Values
Natural product nomenclature Radicals, Ions & Radical Gold Book
(Section F) Ion Nomenclature IUPAC definitions of terms.
Numbering of Fullerenes
Fullerene nomenclature New Numerical Terms to 9999
NEW
Regular single-strand organic
Watch this space.
polymers nomenclature New
Recommendations by IUPAC and IUBMB
(International Union of Biochemistry and Molecular Biology)
from the Joint Commission on Biochemical Nomenclature
Nomenclature of Amino Acids and Nucleic Acid & Constituents Carbohydrate
Peptides Abbreviations and Symbols Nomenclature
Conformation of Polypeptide Conformations of Conformation of
Chains Polynucleotide Chains Polysaccharide Chains
Glycopeptide, Glycoprotein &
Glycolipid Nomenclature Cyclitol Nomenclature
Peptidoglycan Nomenclature
Polymerised Amino Acids Newsletter (1996, 1999 &
Lipid Nomenclature
Nomenclature 2004)
Prenol Nomenclature
Steroid Nomenclature Vitamin D Nomenclature
Terpenoid precursors
Retinoid Nomenclature
Folic Acid Nomenclature Carotenoid Nomenclature
(Vitamin A)
Tocopherol Nomenclature Vitamin B-6 Nomenclature Corrinoid Nomenclature
(Vitamin E) (Pyridoxal) (Vitamin B-12)
Biochemical Phosphorus
Biochemical Thermodynamics Lignan Nomenclature
Compounds
Nomenclature of Quinones with Tetrapyrrole Nomenclature Watch this space !
Isoprenoid Chains
Other recommendations, bibliographic data etc.
Enzyme Nomenclature
Nomenclature Nucleic Acid (EC 1 oxidoreductases, EC 2
IUBMB recommendations Sequences transferases, EC 3 hydrolases, EC 4
(incompletely specified bases) lyases, EC 5 isomerases and EC 6
ligases) and Supplements 1 to 11

Electron Transport Proteins Peptide Hormone


Enzyme kinetics
Nomenclature Nomenclature
Bibliography of IUPAC
Bibliography of IUPAC Bibliography of IUPAC-IUBMB
Organic Chemical
nomenclature recommendations Biochemical Nomenclature
Nomenclature
Bibliography of IUPAC Bibliography of IUPAC
Bibliography of IUPAC
Macromolecular Chemical Inorganic Chemical
Nomenclature Books
Nomenclature Nomenclature
Pure and Applied Chemistry;
IUPAC Spectrochemical Chemistry International;
contents (mirror sites in USA,
recommendations (mirror sites contents (mirror sites in USA,
Germany, Japan, Korea, South
in USA, Germany, Japan, Germany, Japan, Korea, South
Africa, UK) also some text and
Korea, South Africa, UK) Africa, UK) also PDF file of text
PDF files
Parameters and Symbols for IUPAC Organisation and people
IUPAC Publications (mirror sites
NMR (mirror sites in USA, (mirror sites in USA, Germany,
in USA, Germany, Japan, Korea,
Germany, Japan, Korea, South Japan, Korea, South Africa,
South Africa, UK)
Africa, UK) UK)
Provisional IUPAC
nomenclature recommendations;
Other IUPAC nomenclature Map of Usage Statistics
and how to get copies (mirror
recommendations (to January 2005)
sites in USA, Germany, Japan,
Korea, South Africa, UK)
Most entries in the above table are hypertext linked to the full details. If these links are not active
please consult the non-table form. This page has been consulted at least times since counting
started.
Changes to Published Documents for World Wide Web Presentation
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Last update 5 December 2005.


Change to IUBMB Nomenclature Home Page for biochemical nomenclature.

Sulfur, Selenium and Tellurium


Quick move to entries starting with the letters E, H, I, M, P, Se, Sulfa, Sulfe, Sulfi, Sulfo, Sulfu,
T or X.

dithioacetals:* See thioacetals.


episulfonium ions:
Ions derived from thiiranes, in which a trivalent sulfur atom bears a positive charge:
hydrocarbylsulfanyl nitrenes:
Nitrenes substituted with hydrocarbylsulfanyl groups, RS-N: RS+=N- RSN. Sulfenyl nitrenes is a
older synonymous term. E.g. MeSN methylsulfanylnitrene or methylthionitrene. The
synonymous term thiazynes (from the third canonical form; confusable with the hetarynes
derivable from 1,2- and 1,4-thiazine) is best avoided.
hydropolysulfides:*
Compounds having the structures RS H, RS H...RSnH, in which Sn is a chain of sulfur atoms, and
2 3

R is hydrocarbyl. NOC Rule C-513.1. GNOC Recom. R-5.5.6. Some people exclude
hydrodisulfides from the class hydropolysulfides.
hydrosulfides: Term used in radicofunctional nomenclature of thiols. NOC C-511.5.
Hydrosulfides is not commonly used as a class name for thiols.
isoselenocyanates:*
Selenium analogues of isocyanates: RN=C=Se. NOC Rule C-833.1.
isothiocyanates:*
Sulfur analogues of isocyanates: RN=C=S. NOC Rule C-833.1.
mercaptals:
A term once used for dithioacetals derived from aldehydes; its use is discouraged. NOC Rule C-
533.1, footnote. See thioacetals.
mercaptans:
A traditional term abandoned by IUPAC, synonymous with thiols. NOC Rule C-511, footnote.
This term is still widely used.
mercaptides: An obsolescent synonym for thiolates.
mercaptoles:
An archaic term for dithioketals. NOC Rule C-533.1, footnote. See thioacetals.
monothioacetals:* See thioacetals.
mustard oils: An archaic term for isothiocyanates, RN=C=S.
polysulfanes:*
Compounds having an unbranched chain of sulfur atoms (S or higher) terminating in H: HSnH.
2

NOC Rule C-515.2. GNOC Recom. R-5.5.6. Some chemists exclude disulfane, HS H, from the
2

class polysulfanes.
polysulfides:*
Compounds R-[S]n-R, with a chain of sulfur atoms (n greater than 1) and R not equal to H. NOC
Rule C-515. GNOC Recom. R-5.5.6. Some chemists exclude disulfides, RS R, from the class
2

polysulfides.
selenenic acids:*
Compounds having the structure RSeOH (R not equal to H). NOC Rule C-701. E.g. ArSeOH,
areneselenenic acids.
selenides:*
1. Compounds having the structure RSeR (R not equal to H). They are thus selenium analogues
of ethers. NOC Rule C-701.1.
2. Metal salts of selane, H Se.
2

seleninic acids:*
Compounds having the structure RSe(=O)OH. NOC Rule C-701.
selenocyanates:*
Salts and esters of selenocyanic acid, HSeCN. NOC Rule C-833.1. E.g. CH CH SeCN ethyl
3 2

selenocyanate.
selenols:*
Compounds having the structure RSeH (R not equal to H). NOC Rule C-701.
selenones:*
Compounds having the structure R Se(=O) . NOC Rule C-701.
2 2
selenonic acids:*
Compounds having the structure RSe(=O) OH. NOC Rule C-701.
2

selenoxides:*
Compounds having the structure R Se=O (R not equal to H). NOC Rule C-701.
2

selones:*
Compounds having the structure R C=Se (R not equal to H). They are thus selenium analogues of
2

ketones. NOC Rule C-701.


sulfamic acids:*
H NS(=O) OH (sulfamic acid) and its N-hydrocarbyl derivatives. NOC Rule C-661.2. Sulfamic
2 2

acid is called sulfamidic acid in inorganic chemistry.


sulfanes:
A term including hydropolysulfides, polysulfanes, polysulfides. Use is discouraged because of
confusion with the newer systematic name sulfane, H S, and the numerous names derived
2

therefrom.
sulfenamides:*
Compounds derived from sulfenic acids, RSOH (R not equal to H), by replacement of -OH by
-NR . NOC Rule C-641.8. May alternatively be considered as alkylsulfanylamines. E.g.
2

C H SNH ethanesulfenamide or ethylsulfanylamine.


2 5 2

sulfenes:
S,S-Dioxides of thioaldehydes and thioketones, R C=SO .
2 2

sulfenic acids:*
Compounds having the structure RSOH (R not equal to H). NOC Rule C-521.1. E.g. PhSOH
benzenesulfenic acid.
sulfenium ions:
A term sometimes erroneously used for sulfenylium ions.
sulfenyl groups:*
Groups having the structure RS- (R not equal to H). This term is derived from sulfenic acids.
NOC Rule C-641.7.The synonymous term alkylsulfanyl groups is derived from sulfane, H S. 2

GNOC Recom. R-5.5.2. E.g. CH -S- methanesulfenyl, methylthio or methylsulfanyl. NOC Rule
3

C-641.6.
sulfenyl nitrenes: See hydrocarbylsulfanyl nitrenes.
sulfenyl radicals:*
Sulfur-centered radicals having the structure RS. (R not equal to H). This term is derived from
sulfenic acids. The synonymous term hydrocarbylsulfanyl radicals is derived from sulfane, H S.
2

NOC Rule C-81.1. GNOC Recom. R-5.8.1.3. RNRI Rule RC-81.2.5. E.g. CH S. methylsulfanyl
3

or methanesulfenyl radical. An older synonymous term is alkylthio radical. NOC Rule C-81.1.
sulfenylium ions:*
Cations having the structure RS+ (R not equal to H). This term is derived from sulfenic acids.
The synonymous term hydrocarbylsulfanylium ions is derived from sulfane, H S. NOC Rule C-
2
83.1. GNOC Recom. R-5.8.2. RNRI Rule RC-82.2.3.4. E.g. CH S+ methylsulfanylium or
3

methanesulfenylium ion.
sulfides:*
1. Compounds having the structure RSR (R not equal to H). Such compounds were once called
thioethers. NOC Rule C-514.1. See also thioacetals.
2. In an inorganic sense, salts or other derivatives of hydrogen sulfide.
3. A term used in additive nomenclature, see imides (2).
sulfilimines: See sulfimides (1).
sulfimides:*
1. H S=NH, sulfimide, and its hydrocarbyl derivatives. NOC Rule C-633.1. (Indexed by
2

Chemical Abstracts Service under the heading sulfilimine.) They are thus related to sulfoxides in
the same way that imines are related to aldehydes or ketones. E.g. (C H ) S=NPh S,S-diethyl-N
2 5 2

-phenylsulfimide.
2. A term used in Chemical Abstracts Service Index Nomenclature for sulfonylamines,
RN=S(=O) . 2

sulfimines: A non-recommended synonym for sulfimides (1).


sulfinamides:*
Amides of sulfinic acids, RS(=O)OH; thus RS(=O)NR . NOC Rule C-641.8. See also amides.
2

E.g. PhS(=O)NHCH N-methylbenzenesulfinamide.


3

sulfinamidines:*
Amidines of sulfinic acids, RS(=O)OH; thus RS(=NR)NR . NOC Rule C-641.9. E.g.
2

PhS(=NH)NH benzenesulfinamidine
2

sulfines:
S-Oxides of thioaldehydes and thioketones. Not recommended because in English the -ine
termination should be reserved for amines, imines, etc. E.g. PhC(=S=O)H thiobenzaldehyde S-
oxide.
sulfinic acids:*
HS(=O)OH, sulfinic acid, and its S-hydrocarbyl derivatives. NOC Rule C-641. E.g.
(CH ) CHS(=O)OH propane-2-sulfinic acid.
3 2

sulfinic anhydrides:*
Compounds having the structure RS(=O)OS(=O)R. See also acid anhydrides. NOC Rule C-
643.1.
sulfinimines: An obsolescent term for sulfimides (1).
sulfinylamines:*
Compounds having the structure RN=S=O. NOC Rule C-661.5. Formerly called thionylamines.
sulfonamides:*
Amides of sulfonic acids: RS(=O) NR' . NOC Rule C-821.1. E.g. PhS(=O) NHCH N-
2 2 2 3

methylbenzenesulfonamide.
sulfonamidines:
A term abandoned because of its ambiguous use to mean either RS(=O)(=NH)NH 2

(sulfonimidamide) or RS(=NH) NH (sulfonodiimidamide). NOC Rule C-641.9 note.


2 2

sulfones:*
Compounds having the structure, RS(=O) R (R not equal to H). NOC Rule C-631.1. GNOC
2

Recom. R-5.5.7. E.g. C H S(=O) CH ethyl methyl sulfone.


2 5 2 3

sulfonediimines:
Compounds having the structure, RS(=NR) R, formally derived from sulfones by replacing (=O)
2 2

by (=NR) . S. Oae and N. Furukawa, Sulfilimines and Related Derivatives, American Chemical
2

Society, 1983, pp. 1-4. E.g. Ph S(=NH) diphenyl sulfonediimine.


2 2

sulfonic acids:*
HS(=O) OH, sulfonic acid, and its S-hydrocarbyl derivatives. NOC Rule C-641.
2

sulfonic anhydrides:*
Compounds having the structure RS(=O) OS(=O) R'. See also acid anhydrides. NOC rule C-
2 2

643.1. E.g. PhS(=O) OS(=O) Ph benzenesulfonic anhydride.


2 2

sulfonimides: A seldom used synonym of sulfoximides; its use is discouraged.


sulfonium compounds:*
Compounds having the structure R S+ and associated anion (generally, but not necessarily, all
3

three R groups are hydrocarbyl). NOC Rule C-551.1. See under onium compounds. E.g.
[(CH ) S]+ Cl- trimethylsulfonium chloride, 1-thioniabicyclo[2.2.1]heptane bromide.
3 3

sulfonphthaleins:
3,3-Bis(hydroxyaryl)-3H-2,1-benzoxathiole S,S-dioxides, formed by condensation of o-
sulfobenzoic acid with phenols or related compounds. Cf. phthaleins. E.g.
sulfonylamines:*
Compounds having the structure RN=S(=O) . NOC Rule C-661.5. (Indexed by Chemical
2

Abstracts Service at the heading sulfimide.) E.g. CH N=S(=O) N-sulfonylmethylamine. 3 2

sulfoxides:*
Compounds having the structure R S=O (R not equal to H). NOC Rule C-631.1. GNOC Recom.
2

R-5.5.7. E.g. Ph S=O diphenyl sulfoxide.


2

sulfoximides:*
Compounds having the structure R S(=O)=NR. NOC Rule C-633.1. (Indexed by Chemical
2

Abstracts Service at the heading sulfoximines). E.g. (CH ) S(=O)=NPh S,S-dimethyl- N- 3 2

phenylsulfoximide.
sulfoximines: See sulfoximides.
sulfur diimides:
The parent compound HN=S=NH and hydrocarbyl derivatives.
sultams:*
Sulfonamides in which the S-N bond is part of a ring. NOC Rule C-671.2.
sultims:
Tautomeric forms of sultams, having a sulfur-nitrogen double bond as part of a ring.

sultines:
Intramolecular cyclic esters of hydroxy sulfinic acids. (Named by supposed analogy with
lactones and sultones; but the -ine ending is unfortunate.) Cf. sulfinic acids.

sultones:*
Intramolecular cyclic esters of hydroxy sulfonic acids, analogous to lactones. NOC Rule C-
671.1. Cf. sulfonic acids.

tellurides:*
1. Compounds having the structure RTeR (R not equal to H). Thus tellurium analogues of ethers.
NOC Rule C-701.2.
2. Metal salts of tellurane, H Te.
2

tellurones:
Compounds having the structure R Te(=O) . Thus tellurium analogues of sulfones. NOC Rule C-
2 2

701.2.
thiazynes: See hydrocarbylsulfanyl nitrenes.
thio:
This prefix properly denotes replacement of an oxygen by a sulfur. NOC Rule C-502. E.g.
PhC(=S)NH , thiobenzamide. Cf. entries thioacetals to thioketones.
2

thioacetals:*
A term including monothioacetals having the structure R C(OR')(SR') (subclass monothioketals,
2

R not equal to H); and dithioacetals having the structure R C(SR') (subclass dithioketals, R not
2 2

equal to H, R' not equal to H). NOC Rule C-533.1. GNOC Recom. R-5.6.4.1. See also
thiohemiacetals .
thioaldehydes:*
Compounds in which the oxygen of an aldehyde has been replaced by divalent sulfur, RC(=S)H.
NOC Rule C-531. E.g. CH CH C(=S)H propanethial.
3 2

thioaldehyde S-oxides:
Compounds having the structure RC(=S=O)H. NOC Rule C-633.2. (Also known by the
disapproved term sulfines which includes thioaldehyde S-oxides and thioketone S-oxides).
thioanhydrides:*
Compounds having the structure acyl-S-acyl. NOC Rules C-543.5, C-643.2. Also called
diacylsulfanes. GNOC Recom. R-5.7.7.3. E.g. CH C(=O)SC(=S)CH CH acetic thiopropanoic
3 2 3

thioanhydride. See acyl groups.


thiocarboxylic acids:*
Compounds in which one or both oxygens of a carboxy group have been replaced by divalent
sulfur: RC(=O)SH or RC(=S)OH monothiocarboxylic acids, RC(=S)SH dithiocarboxylic acids.
NOC Rule C-541.1.
thiocyanates:*
Salts and esters of thiocyanic acid HSCN. See isothiocyanates. NOC Rule C-833.1. E.g. CH 3

SCN methyl thiocyanate.


thioethers: Former name for sulfides RSR (R not equal to H). NOC Rule C-514.1, footnote.
thiohemiacetals:*
Compounds of structure R C(SR')OH or R C(OR')SH (monothiohemiacetals), or R C(SR')SH
2 2 2

(dithiohemiacetals), R' not equal to H. NOC Rule C-533.2.


thioketones:*
Compounds in which the oxygen of a ketone has been replaced by divalent sulfur: R C=S (R not
2

equal to H). NOC Rule C-532.2. E.g. CH C(=S)CH CH butane-2-thione.


3 2 3

thioketone S-oxides:
Compounds having the structure R C=S=O (R not equal to H). NOC Rule C-633.2. (Also known
2

by the disapproved term sulfines which comprises thioaldehyde S-oxides and thioketone S-
oxides.)
thiols:*
Compounds having the structure RSH (R not equal to H). Also known by the term mercaptans
(abandoned by IUPAC). NOC Rule C-511.2. E.g. MeCH SH ethanethiol.
2

thiolates:*
Derivatives of thiols, in which a metal (or other cation) replaces the hydrogen attached to sulfur.
NOC Rules C-511.3, C-511.4. E.g. CH S- Na+ sodium methanethiolate.
3

thionylamines: See sulfinylamines.


thiyl radicals:
Synonymous with sulfenyl radicals. Due to inconsistencies in use the term is not recommended.
RNRI Rule RC-81.2.5.
xanthates: See xanthic acids.
xanthic acids:

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