Jarava - A New High-Yielding and Pest-Resistant Rice Variety For Coastal Saline Areas

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Genetic resources

Jarava–a new high-yielding and pest-resistant


rice variety for coastal saline areas
T. Ram, N.D. Majumder, and B. Mishra, Directorate of Rice Research, Rajendranagar,
Hyderabad 500030, India

Coastal as well as inland soil salinity and alkalinity are the predominant
abiotic stresses that limit rice production on about 8.5 million ha in India. The
very few varieties developed for the salt-affected areas came predominantly
from donors such as Pokkali, SR26B, Nonasail, Getu, Dasal, Chittivirippu, and
Damodar, which have moderate tolerance. So far, adoption of varieties
developed for the coastal saline areas is very limited (Akbar et al 1986)
because of the occurrence of major biotic and other mineral stresses associated
with salinity in these areas. We therefore initiated a breeding program for the
introgression of multiple genes of agronomic importance from wild rice
Oryza rufipogon. One accession of O. rufipogon (WR107), which was tolerant
of salinity at ECe 9–10 dS m-1, immune to blast, and resistant to bacterial leaf
blight (BB), brown planthopper (BPH), and whitebacked planthopper
(WBPH), was crossed with a high-yielding line, B32-Sel-4, which was
susceptible to salinity, blast, BB, BPH, and WBPH. The F1 was crossed with
another susceptible line, B29-6 (late duration). Half of the F2 of the three-way
cross were screened for blast resistance and half for salinity tolerance (ECe 9–
10 dS m-1) and the 20 tolerant/resistant plants from each screening were
intermated. A second cycle of intermating was also done in the F2 of the first
intermated population. Thereafter, pedigree selection was followed.
In the F5 generation, 42 introgression lines were screened for salt
tolerance and resistance to blast, BPH, WBPH, and BB. Six promising lines
tolerant of salt and resistant to blast, BB, and BPH were evaluated in the All
India Coordinated Rice Improvement Program (AICRIP) trials for yield under
saline conditions. They were likewise screened for resistance to major pests
and diseases.
The introgression line B90-15 with tolerance/resistance to salinity,
blast, BB, and BPH was evaluated in AICRIP trials from 1999 to 2001 and in
2004 as IET15420 in coastal saline areas under low salinity (Andhra Pradesh),
moderate salinity (West Bengal and Maharashtra), high salinity (Andamans),
and alkalinity with saline water irrigation with 1.7 dS m-1 and RSC 9.0 meq L-1
(Pondicherry). It was also screened for major disease and insect pest
resistance. In the four years of testing, with newly released varieties CST7-1
and CSR27 as salt-tolerant checks and Jaya as a yield check, the average yield
of IET15420 under moderate salinity conditions of West Bengal and

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Genetic resources

Maharashtra was 4.8 and 5.7 t ha-1, respectively, with significantly higher
yield than all the checks. In Andhra Pradesh and Pondicherry, where salinity
was associated with alkalinity, it yielded 4.1 and 3.4 t ha-1, respectively. Under
high-salinity conditions (ECe 9.2–10 dS m-1) in the Andamans, the average
yield of IET15420 was 2.8 t ha-1 (Table 1). The yield advantage of IET15420
over the check varieties is shown in Table 1. Since both indica parents (B32-
Sel-4 and B29-6) were susceptible to salinity and other abiotic stresses, the
tolerance in IET15420 indicated that the genes for salinity and other abiotic
stress resistance in IET15420 were introgressed from O. rufipogon.

Table 1. Mean yield performance of Jarava (IET15420) over locations and years in
different states.

State Trials Yield (t ha-1) Yield superiority (%) of Soil pH ECe


(no.) IET15420 over checks (dS m–1)
IET15420 CST7-1 CSR27 Jaya CST7-1 CSR27 Jaya
West Bengal 7 4.8 3.6 (5)a 3.0 (6) 2.8 (7) 33.3 60.0 71.4 6.0–7.6 6.4–7.5
Andhra 3 4.1 3.6 (2) 3.2 (2) 3.1 (2) 13.9 28.1 32.3 7.7–8.6 3.2–4.7
Pradesh
Pondicherry 3 3.4 2.5 (3) 2.0 (3) 2.3 (3) 36.0 70.0 47.8 8.2–8.6 1.6–1.8
Andamans 2 2.8 1.2 (3) 1.5 (3) 1.7 (3) 133.3 86.7 64.7 5.7–6.2 9.2–10
Maharashtra 3 5.7 5.2 (3) 4.0 (3) 4.2 (3) 10.0 42.5 39.0 7.5–7.9 4.5–5.6
Weighted mean 4.4 3.4 2.9 2.3 29.4 51.7 91.3
a
Numbers in parentheses indicate the number of times IET15420 was statistically superior to corresponding checks at the 5%
significance level.

IET15420 (B90-15) was screened against different lineages of blast and


bacterial leaf blight (BLB), sheath blight (ShB), rice tungro disease (RTD),
BPH, WBPH, green leafhoppers (GLH), leaffolders, and a mixed population of
planthoppers under artificial and natural infection/infestation conditions
(AICRIP 1999-2001, 2004). Over the years and locations, IET15420 showed
broad-spectrum resistance to blast, neck blast, leaffolders, and planthoppers
and moderate resistance to BLB, ShB, RTD, BPH, WBPH, and GLH (Table 2).
Both the indica parents and introgression lines were also screened for blast,
BB, BPH, and WBPH in a glasshouse under artificial infestation. The results
showed that the indica parents were susceptible to the diseases and insect
pests and IET15420 was resistant, indicating that genes for multiple pest and
disease resistance in IET15420 were also introgressed from O. rufipogon.

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Table 2. Average reaction over the years of IET15420 to major pests and diseases at
hot-spot locations.

Disease and Trials Score in the 0-9 SES scaleb


insect pesta (no.) Jarava IR64 HR12 TN (1) Ajaya Vikramarya Swarnadhan
(IET15420) R: Blast S: Blast S: BLB, R: BLB R: RTD MR: ShB
RTD, ShB
Leaf blast 57 2.5 3.5 7.3 –c – – –
Neck blast 5 2.4 4.3 7.5 – – – –
BLB 47 4.9 – – 7.7 4.1 7.1 6.8
ShB 32 5.0 – – 7.1 6.1 5.7 5.5
RTD 7 4.0 – – 7.9 5.3 2.0 4.3
BPH 16 4.0 – – 9.0 – – –
WBPH 14 4.0 – – 9.0 – – –
GLH – 4.5 – – 9.0 – – –
Mixed – 2.1 – – 9.0 – – –
population of
planthoppers
Leaffolders – 1.7 – – 7.0 – – –
a
BLB = bacterial leaf blight, RTD = rice tungro disease, ShB = sheath blight,
BPH = brown planthopper, WBPH = whitebacked planthopper, GLH = green leafhopper.
b
Score 0–3 = resistant, 3.1–5 = moderately resistant, 5.1–9 = susceptible. c– = not tested.

In terms of quality characteristics, IET15420 had short, bold grains,


58.4% head rice recovery, intermediate amylose content and alkali spreading
value, and soft gel consistency (Table 3). It had better cooking quality than
CST7-1 and CSR27, which have been released for coastal saline areas.
Considering its yield superiority over the check varieties in moderately and
highly saline and sodic conditions, its multiple resistance to/tolerance for
major biotic stresses, and its better cooking quality, introgression line
IET15420 was officially released as variety Jarava for cultivation in the coastal
saline areas of West Bengal, Pondicherry, and the Andamans in 2006. Jarava is
a prime example of a variety into which multiple genes of agronomic
importance were introgressed from O. rufipogon.

Table 3. Quality characteristics of IET15420 (Jarava) and check varieties.

Varieties
Quality characteristic
Jarava CST7-1 CSR27 Jaya

Milling (%) 65.8 ± 2.2 68.5 ± 1.2 70.2 ± 0.95 71.9 ± 0.3

Head rice recovery (%) 58.4 ± 1.7 54.6 ± 6.2 51.8 ± 4.1 64.4 ± 1.6

Kernel length (L) (mm) 5.6 ± 0.08 5.6 ± 0.11 6.2 ± 0.12 5.7 ± 0.06

Kernel breadth (B) (mm) 2.4 ± 0.02 2.43 ± 0.01 2.2 ± 0.02 2.5 ± 0.11

L/B 2.3 ± 0.05 2.3 ± 0.04 2.8 ± 0.03 2.3 ± 0.02

Grain typea SB SB LB SB

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Alkali spreading value 5.0 7.0 7.0 7.0

Amylose content (%) 25.02 ± 0.01 22.58 ± 0.02 27.45 ± 0.03 26.3 ± 0.03

GCb (mm) 35.0 ± 0.1 58.0 ± 0.5 53.0 ± 0.1 53.0 ± 0.6

Grain chalkiness VOCc VOC VOC VOC


a b c
SB = short bold; LB = long bold. GC = gel consistency. VOC = very occasionally present.

References
AICRIP (All India Coordinated Rice Improvement Program). 1999-2001 and 2004. Progress
report. Vol. 1. Varietal improvement. Hyderabad (India): National Screening Nursery
of Pathology and Entomology, AICRIP.
Akbar M, Gunawardena IE, Ponnamperuma FN. 1986. Breeding for soil stresses. In:
Progress in rainfed lowland rice. Manila (Philippines): International Rice Research
Institute. p 263-273.

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