Discover, Analyze, and Integrate NIH Common Fund Data

The NIH Common Fund programs generate diverse datasets from a variety of projects ranging from genomics to phenotypes. The Common Fund Data Ecosystem (CFDE) aims to facilitate improved discovery, reuse, integration, and analyses of these datasets to form novel hypothesis for accelerating discoveries in biomedical research.

The Common Fund Data Ecosystem (CFDE) aims to enable broad use of data generated by Common Fund Programs to accelerate hypothesis generation and discovery.

CFDE NAVIGATION WHEEL
ABOUT THE WORKBENCH
workbench
RECENT PRESENTATION
Omics Tools Webinar Series: GeneSetCart
gsc

Common Fund programs partnered with the CFDE

The NIH Common Fund is a funding entity within the NIH that supports bold scientific programs that catalyze discovery across all biomedical and behavioral research.

IDG
SenNet
ExRNA
LINCS
Metabolomics
A2CPS
4DN
Kids First
GTEx
GlyGen
MoTrPAC
SPARC
HMP
Bridge2AI
HuBMAP
SMaHT
ComPASS
NPH

Documentation

Learn more about the standards and protocols for accessing and submitting data to the portal

Documentation

Learn more about the standards and protocols for accessing and submitting data to the portal
fair

Making data more FAIR

The Data Resource and Knowledge Centers are dedicated to enhancing the accessibility and utility of Common Fund-generated data and resources, striving to uphold the FAIR principles. This commitment serves as a catalyst for groundbreaking biomedical discoveries, fostering synergies across the diverse datasets within the Common Fund ecosystem, thereby unlocking novel avenues of research and innovation.
  • Findable
  • Accessible
  • Interoperable
  • Reusable

Social Media

Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.

As we approach World Tuberculosis (TB) Day on March 24, we’re reminded that TB is preventable and curable—yet it still claims lives across Africa. Early detection, treatment, and strong health systems are key. Ending stigma and raising awareness can help stop TB in its tracks.
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Following up from Tuesdays post, our World Health Organization colleagues would love for you to join them at their next @WHO #genomics webinar! 🧬 Date: Monday, April 8, 2024 🧬 Time: 13:00 – 13:45 CET 🧬 Register! who.zoom.us/webinar/regist… See you there! #ProudToBeWHO #WHO
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A new NIH-supported study suggests that how long a person can stand on only a non-dominant leg may be an easy and reliable way to assess health in aging populations. bit.ly/4iQt5dh
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Less than three weeks left to submit your required Letter of Intent (LOI) to the #NIHCommonFund’s #NBSxWGS Collaboratory #FundingOpportunity! Explore how you can contribute to enhancing early diagnosis of treatable #GeneticConditions in newborns: go.nih.gov/sL9B0jX
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GSK AMR, Bacterial Genomics, and Bioinformatics Workshop – Wear WACCBIP Day! 🎉 Snapshots of participants proudly repping WACCBIP alongside Prof @gordon_awandare, the Founding Director. #WearWACCBIP #ProudlyWACCBIP #Science
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Dr. Liao’s study on early skull fusion (craniosynostosis) can improve treatment using #KidsFirstDRC data. #TogetherWeRise #PediatricResearch #X01Researcher
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The 4 most common oral diseases are: 🔸 tooth decay 🔸 gum disease 🔸 tooth loss 🔸 oral cancers Fortunately, most cases are preventable and can be treated in their early stages. Learn more about #OralHealth: bit.ly/2Gsj3Pu
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📢 Calling all young change-makers: @‌UNYouthAffairs is looking for the next #YoungLeaders! This is your chance to be recognized for your leadership catalyzing change in communities to help achieve the #SDGs🔥 Apply by 18 April 2025: tinyurl.com/y2nvkmzr #YouthLead
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Final call for feedback to help shape the future of malaria genomics training 🧬 Please take a moment to share your experiences with any training programmes that focused on analysing genomic data from malaria parasites and/or vectors Deadline: 20th March docs.google.com/forms/d/e/1FAI…
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Want the tools to build bodies? Then get to the nuts and bolts of these new tools just announced by #_hubmap researchers. @naturemethods will lay a concrete foundation for scientists to build maps of the human body. It’s absolutely riveting! (Hope you saw what we did there! 😉)
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#KidsFirstDRC virtual office hours are now held in collaboration with #Velsera and @wearecbtn. Tomorrow, get your technical questions answered by our experts and learn more about leveraging these great resources: ecs.page.link/wVdQX
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🗣️ We’re hiring! 🗣️ 3-year Research Fellow position available in the newly established Mortality and Inequalities Research Group, working closely with José Manuel Aburto. Deadline 15 April. DM us if interested. More positions coming soon, stay tuned! jobs.lshtm.ac.uk/Vacancy.aspx?i…
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At our March journal club, Brian Polo presented findings from a recent pre-print that sheds light on the complex genetic landscape of An. arabiensis and its evolving insecticide resistance across Kenya. #ICYMI or want to revisit it, watch the recording ⤵️ youtu.be/_qHaIwIzHBY
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📢IBT 2025 Applications Closed! The application window for IBT is now officially closed! We received an overwhelming 6,000 applications—thank you to everyone who applied! From these, 1,800 participants will be selected for this year’s training.
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Enter the @Nature #ScientistAtWork Competition! For more info and check out past winners here: nature.com/immersive/scie… (NOTE: This competition is NOT open to professional photographers)
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Scholarship Announcement: @Makerere is pleased to announce 190 Undergraduate and 11 Master’s Scholarships for Academic year 2025/2026 courtesy of @MastercardFdn. We encourage those eligible to apply. Start preparing today: apply.mastercardfoundation.mak.ac.ug
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Less than one week to register for the #NIHCommonFund’s #NBSxWGS #FundingOpportunity technical assistance #webinar on 3/24! Register to participate in a Q&A with the NIH staff managing this opportunity: bit.ly/NBSxWGS_Webinar
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🌍 @AfricaCDC’s Africa Public Health Podcast launches this Thursday! In our first episode, Dr. @sofoniaskt, Programme Lead for Pathogen Genomics, explores how genomics is revolutionizing outbreak detection and disease response in Africa. From malaria research to tracking https://t.co/bXHPPEZ77w
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News: NIH-funded study identifies potential new stroke treatment nih.gov/news-events/ne…
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🩸🧬 After living with Diamond-Blackfan anemia syndrome for 50 years, Jason Rose partnered with the UDN Miami Site to uncover a large deletion on chromosome 3 that included the #RPL35A gene known to be responsible for up to 3% of #DBAS cases. @UDNForg bit.ly/4ibrGOq
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Oral diseases are among the most common #NCDs. They encompass a range of conditions, including gum disease, oral cancer, and dental caries. Symptoms may include: 🔸 Bleeding or swollen gums 🔸 Persistent bad breath 🔸 Toothaches or sensitivity 🔸 Loose or shifting teeth 🔸 Pain
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Measles is highly contagious and can cause serious complications, especially in children. 💉Vaccination is the best way to protect your child. #ViralFacts @viralfacts https://t.co/zK1avrATUF
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This week, @AfricaCDC had the honor of welcoming His Excellency @jlprdeangola, President of Angola and Chairperson of the @_AfricanUnion, alongside His Excellency @ymahmoudali, Chairperson of the African Union Commission, to its headquarters in Addis Ababa. The visit reinforced
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Regular physical activity‍🏃🏿‍♂️ has significant health benefits. It helps reduce the risk of: 💔 Cardiovascular disease 💔 Cancer 💔 Type 2 diabetes 💔 Dementia Make time to exercise this Sunday—and regularly—to stay healthy and prevent NCDs. 🧘🏿‍♀️🏃🏿‍♂️🕺🏿💃🏿🏋🏿‍♂️ #LetsBeatNCDs
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For #WorldCancerDay, #NIHCommonFund is highlighting the Gabriella Miller #KidsFirst Pediatric Research Program. Learn how Kids First is working to advance research in #PediatricCancer and birth defects: youtube.com/watch?v=h1H08Z…
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#dkNET presents a "Building Knowledge Graphs Towards Transparent Biomedical #AI " #webinar with Dr. Jie Liu - Join us today at 11 am PT! More info: dknet.org/about/blog/2821 #MachineLearning #DataScience #bioinformatics #diabetes #genomics
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Huge Congratulations to our Head of Division, Prof Collet Dandara, for being awarded the Human Genome Organisation (HUGO) Africa Prize 🌍👏🏾 @humangenomeorg @DandaraCollet @UCTHealthSci @UCT_news @AfSHG_Genetics @SAHumanGenetics
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Replying to @DSI_Africa
@Nicky_Mulder @H3Africa @eLwazi_ODSP 🚨 Happening Now at #HGM2025! 🚨 Dr. @MichelleSkelton is live in Suite 5, discussing: 🧬 Enhancing Health Innovation through Sustainable African Data and Biospecimen Oversight: H3Africa DBAC to African DBAC This session highlights the future of data governance, biospecimen
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Replying to @DSI_Africa
🔬 Happening Now at #HGM2025! Join Prof. @Nicky_Mulder as she presents on: 🧬 Topic: Exploring Regional Diversity of Relevant Variants in African Populations 📍 Location: Great Ilanga Her insights into African genomic diversity are shaping the future of precision medicine and
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🌍✨ Exciting news! DS-I Africa is proud to have Dr. @francisagamah speaking at the Human Genome Meeting 2025 in Durban, South Africa! 🔬 Topic: Assessing Genomic Diversity in African Populations and Developing Resources and Protocols for Genomics Research – H3Africa Genome
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Attending #ISCBAfrica2025? Don’t miss the 6 tutorials! If you're registered for the conference, tutorial registration is complimentary. Learn more here: t.ly/9ueqM
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Podcast with Dr. Shankar Subramaniam about integrating and making @NIH_CommonFund data more accessible. Highlighting @CfdeWorkbench cdfe.info, a robust info and data portal for researchers to access and analyze omics datasets effectively tinyurl.com/yka7jjpc.
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NIH-funded research developed a way to track food intake by analyzing DNA from stool samples. This type of method could improve the accuracy of food-intake studies. bit.ly/4hlsUoU
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Apply to serve as a committee member or the board of directors. You can: ✅Shape key programs ✅Expand your professional network ✅Have fun Learn more & apply today: ashg.org/about/nominati… #ASHG #HumanGenetics
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‼️Attention‼️ Check out the platform presentations and posters by UDN investigators at next week's 2025 ACMG Annual Clinical Genetics Meeting!
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Want to stay up to date on announcements from the #NIHCommonFund’s Newborn Screening by Whole Genome Sequencing initiative? Join the #NBSxWGS listserv: go.nih.gov/NBSxWGS-listse…
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Exciting news!!! Visit our booth at the Human Genome Meeting 2025 in Durban and chance a chance WIN a mystery prize #DSIAfrica #H3Africa #eLwazi #HGM25
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Replying to @kidsfirstDRC
@kidsfirstDRC Portal is your one-stop shop for exploring big #datasets that help shape the future of pediatric healthcare. Head to ecs.page.link/LbmEH to discover more!
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Using Kids First DRC data? Cite us! Include @kidsfirstDRC acknowledgments to foster collaboration and discoveries. Learn how: kidsfirstdrc.org/resources#faqs
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🚨 Webinar alert 🚨 "Expanding Access to Genomics Through Workforce Education and Training" Details in the poster below
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Apply for this @EMBO practical course by 25 May to learn more about concepts, methods and tools for carrying out infectious disease modelling leveraging the power of genomics: ebi.ac.uk/training/event… Some financial support is available - see course website for more info.
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Clean air is a human right! #AirPollution impacts our health and can cause: 🫀 heart disease 🧠 stroke 🫁 chronic lung disease 🫁 pneumonia 🧬 cancer 🗣️ asthma, among others Clean air is possible for all! Sign the call to action for a future with clean air:
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🚨 WHO WEBINAR – Expanding Access to Genomics Through Workforce Education & Training 🚨 Join us for a dynamic discussion with global experts 🧬 💡 📅 April 8, 2025 ⏰ 13:00 – 13:45 CET 📍 Free Registration 🔗 Register Now: lnkd.in/dw_KU4aB #Genomics #GlobalHealth #WHO
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Strong leadership is key to transforming mental health systems in Africa. In collaboration with @Kmtc_official in Nairobi, we are supporting participants in the Mental Health Leadership and Advocacy Course, led by leading African and global experts. This program equips
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Training opportunity... 👇🏽 Polygenic Risk Score Analysis Workshop 📅 22nd - 27th June 2025 Kampala, Uganda 🇺🇬 Application deadline 1st April 2025 Shttps://lnkd.in/d33XFKYt #Genetics #PolygenicRiskScore
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Check out the most recent UDN publication! ⭐️Key takeaway: Researchers at Baylor College of Medicine validated an RNA-seq test to detect gene expression and splicing outliers for genetic diagnostics @UDNForg pubmed.ncbi.nlm.nih.gov/40043707/
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Want to learn more about the #NIHCommonFund’s #NewbornScreening by #WholeGenomeSequencing Collaboratory #FundingOpportunity? Join the #NBSxWGS technical assistance #webinar, March 24th at 11 AM ET. Register: bit.ly/NBSxWGS_Webinar
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Early-career Malian scientists, submit a concept paper for the Donald Krogstad Award by April 9. Receive $25,000 US total for up to two years for research. tinyurl.com/5n6knas6
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ISCB nominations are open! Members can nominate candidates for ISCB leadership to help shape the Society's future. Learn more and submit your nominations here:  t.ly/x54_c
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Shape the future of evidence-based policy at #SciPol25! Dates: 18-20 August 2025 Join a forum for academics & #policymakers to discuss approaches for improving the uptake of #research into UK #SciencePolicy. Apply by 3 June⏰ Bursaries available💸 📎 bit.ly/3FfuWK9
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Hear from leaders in the field about enabling #PrecisionMedicine with #AI by integrating #MedicalImaging with other #Data types - join the #NIHCommonFund at the second day of this virtual workshop! See you there! go.nih.gov/awiS2id
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Some countries in the African region are experiencing cholera outbreaks. Here's everything you need to know about #cholera, its symptoms, and how to reduce your risk of infection ⬇️ #ViralFactsAfrica @viralfacts https://t.co/ds14Heu0GL
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Time is running out to apply! @HigherEduGovZA is offering fully funded scholarships (Bachelor’s, Master’s and PhD) to South African students to study in Germany. Details here: internationalscholarships.dhet.gov.za/index.php/scho…
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Interested in the integration of #AI with #MedicalImaging and other data types? Have ideas about how this can improve healthcare? Join the virtual conversation TODAY to help the #NIHCommonFund prioritize opportunities in this area! Register here: go.nih.gov/awiS2id
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EMBL-UNESCO #fellows: a call to female African scientists working in infection biology! 🦠 An opportunity to: 🥼 Gain wet lab and/or computational skills 🌍 Build an international scientific network We got your attention? Apply here: embl.org/about/info/sci… #infectiousdisease
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There’s just 1 more day until the #NIHCommonFund workshop about enabling #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types. Join the virtual conversation and share your ideas! March 11-12. Register today: go.nih.gov/awiS2id
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Today is the day! Submit you application by 5:00PM for the #ComplementARIE #FundingOpportunity to be a part of the #NewApproachMethodologies #data hub and coordinating center! go.nih.gov/3MBEmGy
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Check out the most recent UDN publication! ⭐️Key takeaway: Pathogenic #PPP2R5C variants cause a Houge-Janssens spectrum disorder with neurodevelopmental delay, hypotonia, epilepsy risk, and macrocephaly. @UDNForg pubmed.ncbi.nlm.nih.gov/39978342/
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Tune in tomorrow (3/11) at 11AM ET to help the #NIHCommonFund prioritize opportunities in enabling #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types. Register for this virtual workshop today: go.nih.gov/awiS2id
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Only a few more days until applications are due for the #ComplementARIE #FundingOpportunity to create the #NewApproachMethodologies #data hub and coordinating center! Submit by 5:00PM March 10th go.nih.gov/3MBEmGy
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Check out the 3 new #Research Hubs joining the #NIHCommonFund #CAREforHealth Program! They'll bring #ClinicalResearch opps for #depression, #anxiety, #arthritis & more to #PrimaryCare settings. Learn more: go.nih.gov/Usl28Fh
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The #NIHCommonFund Venture Program’s Newborn Screening by Whole Genome Sequencing (#NBSxWGS) Collaboratory issued a #FundingOpportunity! Learn more about this exciting initiative: commonfund.nih.gov/venture/NBSxWGS
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🎊 Successful 2025 in-person meeting 🎊 Reflecting on the great meeting in February! Great to connect face-to-face, welcome new network members, and discuss advances in diagnostics and better ways to support participants just a week before #RareDiseaseDay
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Check out the most recent UDN publication! ⭐️Key takeaway: #TAX1BP3 is associated with rare autosomal recessive Arrhythmogenic cardiomyopathy through #TRPV4-mediated Ca2+ leak from RyR2. @UDNForg pubmed.ncbi.nlm.nih.gov/39963794/
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📣Attention writers, teachers, and changemakers—the deadline to submit your essay for the contest has been extended until Sunday at 11:59 PM U.S. ET! Don't miss out on this extended opportunity to share your voice and ideas. Submit your essay now! 👇ashg.org/dna-day/ #ASHG
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New opportunity!🌟 @ASTMH 📢Call for Interest to serve on the Professor Dominic Kwiatkowski Fellowship Committee 📍Volunteer based 📍For early- to mid-career researchers in malaria genomics from malaria endemic countries Find out more ➡️ow.ly/Hpgi50VaQp8
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Passionate about public health genomics? Join PHA4GE and be part of a global network advancing open science, data sharing, and equitable genomics solutions. 🌍🔬 Become a member today! pha4ge.org/membership/ #PHA4GE #Genomics
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Only a few days left to submit your application to the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity. Submit your application before time runs out! commonfund.nih.gov/venture/NIOI #VentureNIOI
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#Bioinformatics is a powerful tool for #biologists working with #GenomicsData🧬 Our free online courses on bioinformatics workflows are available on demand until February 2026. From 10-30 March 2025, join our educators for a limited facilitation period in the comments 🔽
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To shape the future of malaria genomics training, we’re mapping the current landscape of available opportunities. Share your experience with any short courses, workshops, or hackathons focusing on analysing genomic data from malaria parasites &/or vectors docs.google.com/forms/d/e/1FAI…
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In honor of #WorldBirthDefectsDay #NIHCommonFund is highlighting the work of #KidsFirst program investigator, Dr. Azeez Butali, showing his use of program data to develop genetic insights on cleft palates. Stay up to date on more insights from Kids First: list.nih.gov/cgi-bin/wa.exe…
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Only 1 week left to apply to the #ComplementARIE #FundingOpp building the #NAMs #data hub and coordinating center! Submit your application today! go.nih.gov/3MBEmGy
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Join our March Journal Club with Brian Polo to explore new evidence on An. arabiensis in Kenya sanger.zoom.us/webinar/regist… His recent first-author preprint, based on genome data from ~500 mosquitoes, uncovers the genetic landscape of this major malaria vector researchsquare.com/article/rs-532…
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Calling all #NewApproachMethodologies researchers! The #NIHCommonFund has announced a #FundingOpp looking for #NAMs researchers to create and manage an integrated data structure for novel NAMs technologies. go.nih.gov/3MBEmGy
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Only one week left to submit your application to the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity. Apply now to be a part of the #VentureNIOI initiative! commonfund.nih.gov/venture/NIOI
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The HIDIVE Lab at @harvardmed is pleased to announce VUES on Spatial Biology - The Future of 3D Tissue Maps on March 11, 2025 — in person at Harvard Medical School in Boston. Sponsored by @NIH-funded @_hubmap. Free registration & more info: vues.events
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@phillyphaces1, helps kids with appearance differences soar socially, medically, and emotionally. #PhillyPhaces #Empowerment #CommunityCare #TogetherWeRise
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Replying to @satijalab
Papers led by incredible lab members John Blair @Longda_Jiang @carol_dalgarno We're using these methods in many of our projects now, and hope you will find them useful in your own work! Many thanks to our generous funders @_hubmap @cziscience and @genome_gov via @cegs_ica
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📢 Don't forget to tune in tomorrow (2/28) at 1PM ET for this #NIHCommonFund #NIH_CFDE webinar featuring Peter Park from @4DNucleome. Tune in 2/28 at 1PM ET to learn about mapping the #genome. Learn more: bit.ly/3vX6iJK #4DNucleome
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⏳ Last Chance for Early Bird Rates! 🗓️ Event Dates: April 22-24, 2025 📍 Location: Tampa, FL 👉 Register now: eventsquid.com/event/26215
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Harnessing AI in Bioinformatics: Unearthing Hidden Patterns for Accelerated Biomedical Discovery Presented by Dr. Musalula Sinkala #DSIAfrica
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AI Infectious Disease Symposium Presenting on Using AI to Support Science Presented by Prof. Nicky Mulder #DSIAfrica #AI
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🎊🏅 Congratulations to Shinya on receiving the 2025 Genetics Society of America Award – Early Career Medal!
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🚨 Early bird rates end 2/28! Don't miss your chance to register for the 2025 #Bridge2AI Voice Symposium. Attendees will learn about #AI/#ML in voice #biomarker #healthcare research. Register: eventsquid.com/event/26215 #NIHCommonFund
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Learn how to analyze data in CAVATICA, a cloud analysis platform, from Dr. David Higgins. See the tutorial: ecs.page.link/esG4e
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Join us on February 28th for our next installment of the #CFDEPublicWebinarSeries featuring @4DNucleome's Peter Park presenting "4D Nucleome Turns 10: Mapping the Dynamic Architecture of the Genome." Register for the event here: broadinstitute.zoom.us/webinar/regist… @CfdeWorkbench @CfdeNih
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The CFDE Workbench: Integrating Metadata and Processed Data from Common Fund Programs biorxiv.org/content/10.110… #biorxiv_bioinfo
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We have so many incredible speakers that will be presenting at our workshop on Friday! Join us to hear cutting edge scientific research from 10 AM - 2 PM ET. Registration is open here: tinyurl.com/mpmnmvrh @CfdeWorkbench @motrpac @TerraBioApp
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· Interested in applying to the #ComplementARIE #NewApproachMethodologies Data Hub and Coordinating Center #FundingOpp? Join the #InformationalWebinar on 2/13/25 at 11am ET! bit.ly/NDHCC_Webinar
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Just a few days left to register for the #NuclearArchitecture Meeting hosted by #4DNucleome! Join us in San Diego, CA on December 11-13, 2024. The deadline to register is Monday, December 2nd. Register today! bit.ly/3X9gha0
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#NutritionforPrecisionHealth is advancing precision #nutrition and was featured on @CBSSunday! The study is led by a coalition of NIH partners, including #NIHCommonFund, the Office of Nutrition Research, and @AllofUsResearch. Enrollment is open! Watch here allof-us.org/3UY1zkm
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Do you develop and market scientific tools? Join us tomorrow, November 22nd from 1-2 PM ET to learn various strategies from #COMPA and @MetaCell during our #CFDEPublicWebinarSeries. Register here: broadinstitute.zoom.us/webinar/regist… @CfdeWorkbench @NIH_CommonFund
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The @CfdeWorkbench team will showcase the #CFDE information portal (cfde.info), the #CFDE data portal (data.cfde.cloud), and #GeneSetCart (genesetcart.cfde.cloud) at #ASHG2024 #ASHG24. To learn more about the #CFDE visit booth 571. @NIH_CommonFund @CFDEKC https://t.co/tgdMOPiAb6
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It's almost time for #ASHG2024! Reminder, we have limited availability for exclusive 1:1 sessions at the #CFDE booth, grab yours before it's too late here: forms.gle/ioovRvfx3NA7SG…. Save travels and see you at Booth 571! @CfdeWorkbench @NIH_CommonFund
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Mark your calendars because we are ONE WEEK away from our #ASHG2024 Ancillary Session on the #CFDE! We look forward to seeing you all in Denver! @CfdeWorkbench @NIH_CommonFund @motrpac
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We are representing the Common Fund Data Ecosystem & debuting our #KnowledgeCenter Resource a #ASHG2024. Come by whenever (sign up below) to learn about how these 14 DCCs & 5 centers within the CFDE can be useful to you as a human geneticist @NIH_CommonFund @CfdeWorkbench
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Join us in two weeks ✌️ at our #ASHG2024 ancillary session: A Human Geneticists' Guide to the Common Fund Data Ecosystem! Hear perspectives by the @NIH_CommonFund, us at the KC, @CfdeWorkbench, @motrpac and @GTExPortal. Hope to see you there!
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Join us this Friday for the #CFDEPublicWebinarSeries featuring #MoTrPAC. Dr. Matthew Wheeler, Jimmy Zhen, & David Jimenez-Morales will present on the Data Hub, general MoTrPAC updates, upcoming data releases, and their pipelines/database structure #CFDE @CfdeWorkbench
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The Common Fund Data Ecosystem is hitting Denver this year, #ASHG2024. Visit our exhibition booth & learn about how the CFDE can support your research @CfdeWorkbench @NIH_CommonFund.
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Learn how @WVCTSI will bring clinical research opportunities to rural communities in West Virginia as one of three new national hubs of the #CAREforHealth network: wvctsi.org/news/story?hea…
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Social Media

Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse.

As we approach World Tuberculosis (TB) Day on March 24, we’re reminded that TB is preventable and curable—yet it still claims lives across Africa. Early detection, treatment, and strong health systems are key. Ending stigma and raising awareness can help stop TB in its tracks.
42
Following up from Tuesdays post, our World Health Organization colleagues would love for you to join them at their next @WHO #genomics webinar! 🧬 Date: Monday, April 8, 2024 🧬 Time: 13:00 – 13:45 CET 🧬 Register! who.zoom.us/webinar/regist… See you there! #ProudToBeWHO #WHO
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A new NIH-supported study suggests that how long a person can stand on only a non-dominant leg may be an easy and reliable way to assess health in aging populations. bit.ly/4iQt5dh
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Less than three weeks left to submit your required Letter of Intent (LOI) to the #NIHCommonFund’s #NBSxWGS Collaboratory #FundingOpportunity! Explore how you can contribute to enhancing early diagnosis of treatable #GeneticConditions in newborns: go.nih.gov/sL9B0jX
0
GSK AMR, Bacterial Genomics, and Bioinformatics Workshop – Wear WACCBIP Day! 🎉 Snapshots of participants proudly repping WACCBIP alongside Prof @gordon_awandare, the Founding Director. #WearWACCBIP #ProudlyWACCBIP #Science
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Dr. Liao’s study on early skull fusion (craniosynostosis) can improve treatment using #KidsFirstDRC data. #TogetherWeRise #PediatricResearch #X01Researcher
0
The 4 most common oral diseases are: 🔸 tooth decay 🔸 gum disease 🔸 tooth loss 🔸 oral cancers Fortunately, most cases are preventable and can be treated in their early stages. Learn more about #OralHealth: bit.ly/2Gsj3Pu
164
📢 Calling all young change-makers: @‌UNYouthAffairs is looking for the next #YoungLeaders! This is your chance to be recognized for your leadership catalyzing change in communities to help achieve the #SDGs🔥 Apply by 18 April 2025: tinyurl.com/y2nvkmzr #YouthLead
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Final call for feedback to help shape the future of malaria genomics training 🧬 Please take a moment to share your experiences with any training programmes that focused on analysing genomic data from malaria parasites and/or vectors Deadline: 20th March docs.google.com/forms/d/e/1FAI…
11
Want the tools to build bodies? Then get to the nuts and bolts of these new tools just announced by #_hubmap researchers. @naturemethods will lay a concrete foundation for scientists to build maps of the human body. It’s absolutely riveting! (Hope you saw what we did there! 😉)
1
#KidsFirstDRC virtual office hours are now held in collaboration with #Velsera and @wearecbtn. Tomorrow, get your technical questions answered by our experts and learn more about leveraging these great resources: ecs.page.link/wVdQX
0
🗣️ We’re hiring! 🗣️ 3-year Research Fellow position available in the newly established Mortality and Inequalities Research Group, working closely with José Manuel Aburto. Deadline 15 April. DM us if interested. More positions coming soon, stay tuned! jobs.lshtm.ac.uk/Vacancy.aspx?i…
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At our March journal club, Brian Polo presented findings from a recent pre-print that sheds light on the complex genetic landscape of An. arabiensis and its evolving insecticide resistance across Kenya. #ICYMI or want to revisit it, watch the recording ⤵️ youtu.be/_qHaIwIzHBY
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📢IBT 2025 Applications Closed! The application window for IBT is now officially closed! We received an overwhelming 6,000 applications—thank you to everyone who applied! From these, 1,800 participants will be selected for this year’s training.
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Enter the @Nature #ScientistAtWork Competition! For more info and check out past winners here: nature.com/immersive/scie… (NOTE: This competition is NOT open to professional photographers)
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Scholarship Announcement: @Makerere is pleased to announce 190 Undergraduate and 11 Master’s Scholarships for Academic year 2025/2026 courtesy of @MastercardFdn. We encourage those eligible to apply. Start preparing today: apply.mastercardfoundation.mak.ac.ug
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Less than one week to register for the #NIHCommonFund’s #NBSxWGS #FundingOpportunity technical assistance #webinar on 3/24! Register to participate in a Q&A with the NIH staff managing this opportunity: bit.ly/NBSxWGS_Webinar
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🌍 @AfricaCDC’s Africa Public Health Podcast launches this Thursday! In our first episode, Dr. @sofoniaskt, Programme Lead for Pathogen Genomics, explores how genomics is revolutionizing outbreak detection and disease response in Africa. From malaria research to tracking https://t.co/bXHPPEZ77w
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News: NIH-funded study identifies potential new stroke treatment nih.gov/news-events/ne…
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🩸🧬 After living with Diamond-Blackfan anemia syndrome for 50 years, Jason Rose partnered with the UDN Miami Site to uncover a large deletion on chromosome 3 that included the #RPL35A gene known to be responsible for up to 3% of #DBAS cases. @UDNForg bit.ly/4ibrGOq
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Oral diseases are among the most common #NCDs. They encompass a range of conditions, including gum disease, oral cancer, and dental caries. Symptoms may include: 🔸 Bleeding or swollen gums 🔸 Persistent bad breath 🔸 Toothaches or sensitivity 🔸 Loose or shifting teeth 🔸 Pain
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Measles is highly contagious and can cause serious complications, especially in children. 💉Vaccination is the best way to protect your child. #ViralFacts @viralfacts https://t.co/zK1avrATUF
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This week, @AfricaCDC had the honor of welcoming His Excellency @jlprdeangola, President of Angola and Chairperson of the @_AfricanUnion, alongside His Excellency @ymahmoudali, Chairperson of the African Union Commission, to its headquarters in Addis Ababa. The visit reinforced
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Regular physical activity‍🏃🏿‍♂️ has significant health benefits. It helps reduce the risk of: 💔 Cardiovascular disease 💔 Cancer 💔 Type 2 diabetes 💔 Dementia Make time to exercise this Sunday—and regularly—to stay healthy and prevent NCDs. 🧘🏿‍♀️🏃🏿‍♂️🕺🏿💃🏿🏋🏿‍♂️ #LetsBeatNCDs
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For #WorldCancerDay, #NIHCommonFund is highlighting the Gabriella Miller #KidsFirst Pediatric Research Program. Learn how Kids First is working to advance research in #PediatricCancer and birth defects: youtube.com/watch?v=h1H08Z…
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#dkNET presents a "Building Knowledge Graphs Towards Transparent Biomedical #AI " #webinar with Dr. Jie Liu - Join us today at 11 am PT! More info: dknet.org/about/blog/2821 #MachineLearning #DataScience #bioinformatics #diabetes #genomics
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Huge Congratulations to our Head of Division, Prof Collet Dandara, for being awarded the Human Genome Organisation (HUGO) Africa Prize 🌍👏🏾 @humangenomeorg @DandaraCollet @UCTHealthSci @UCT_news @AfSHG_Genetics @SAHumanGenetics
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Replying to @DSI_Africa
@Nicky_Mulder @H3Africa @eLwazi_ODSP 🚨 Happening Now at #HGM2025! 🚨 Dr. @MichelleSkelton is live in Suite 5, discussing: 🧬 Enhancing Health Innovation through Sustainable African Data and Biospecimen Oversight: H3Africa DBAC to African DBAC This session highlights the future of data governance, biospecimen
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Replying to @DSI_Africa
🔬 Happening Now at #HGM2025! Join Prof. @Nicky_Mulder as she presents on: 🧬 Topic: Exploring Regional Diversity of Relevant Variants in African Populations 📍 Location: Great Ilanga Her insights into African genomic diversity are shaping the future of precision medicine and
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🌍✨ Exciting news! DS-I Africa is proud to have Dr. @francisagamah speaking at the Human Genome Meeting 2025 in Durban, South Africa! 🔬 Topic: Assessing Genomic Diversity in African Populations and Developing Resources and Protocols for Genomics Research – H3Africa Genome
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Attending #ISCBAfrica2025? Don’t miss the 6 tutorials! If you're registered for the conference, tutorial registration is complimentary. Learn more here: t.ly/9ueqM
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Podcast with Dr. Shankar Subramaniam about integrating and making @NIH_CommonFund data more accessible. Highlighting @CfdeWorkbench cdfe.info, a robust info and data portal for researchers to access and analyze omics datasets effectively tinyurl.com/yka7jjpc.
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NIH-funded research developed a way to track food intake by analyzing DNA from stool samples. This type of method could improve the accuracy of food-intake studies. bit.ly/4hlsUoU
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Apply to serve as a committee member or the board of directors. You can: ✅Shape key programs ✅Expand your professional network ✅Have fun Learn more & apply today: ashg.org/about/nominati… #ASHG #HumanGenetics
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‼️Attention‼️ Check out the platform presentations and posters by UDN investigators at next week's 2025 ACMG Annual Clinical Genetics Meeting!
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Want to stay up to date on announcements from the #NIHCommonFund’s Newborn Screening by Whole Genome Sequencing initiative? Join the #NBSxWGS listserv: go.nih.gov/NBSxWGS-listse…
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Exciting news!!! Visit our booth at the Human Genome Meeting 2025 in Durban and chance a chance WIN a mystery prize #DSIAfrica #H3Africa #eLwazi #HGM25
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Replying to @kidsfirstDRC
@kidsfirstDRC Portal is your one-stop shop for exploring big #datasets that help shape the future of pediatric healthcare. Head to ecs.page.link/LbmEH to discover more!
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Using Kids First DRC data? Cite us! Include @kidsfirstDRC acknowledgments to foster collaboration and discoveries. Learn how: kidsfirstdrc.org/resources#faqs
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🚨 Webinar alert 🚨 "Expanding Access to Genomics Through Workforce Education and Training" Details in the poster below
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Apply for this @EMBO practical course by 25 May to learn more about concepts, methods and tools for carrying out infectious disease modelling leveraging the power of genomics: ebi.ac.uk/training/event… Some financial support is available - see course website for more info.
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Clean air is a human right! #AirPollution impacts our health and can cause: 🫀 heart disease 🧠 stroke 🫁 chronic lung disease 🫁 pneumonia 🧬 cancer 🗣️ asthma, among others Clean air is possible for all! Sign the call to action for a future with clean air:
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🚨 WHO WEBINAR – Expanding Access to Genomics Through Workforce Education & Training 🚨 Join us for a dynamic discussion with global experts 🧬 💡 📅 April 8, 2025 ⏰ 13:00 – 13:45 CET 📍 Free Registration 🔗 Register Now: lnkd.in/dw_KU4aB #Genomics #GlobalHealth #WHO
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Strong leadership is key to transforming mental health systems in Africa. In collaboration with @Kmtc_official in Nairobi, we are supporting participants in the Mental Health Leadership and Advocacy Course, led by leading African and global experts. This program equips
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Training opportunity... 👇🏽 Polygenic Risk Score Analysis Workshop 📅 22nd - 27th June 2025 Kampala, Uganda 🇺🇬 Application deadline 1st April 2025 Shttps://lnkd.in/d33XFKYt #Genetics #PolygenicRiskScore
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Check out the most recent UDN publication! ⭐️Key takeaway: Researchers at Baylor College of Medicine validated an RNA-seq test to detect gene expression and splicing outliers for genetic diagnostics @UDNForg pubmed.ncbi.nlm.nih.gov/40043707/
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Want to learn more about the #NIHCommonFund’s #NewbornScreening by #WholeGenomeSequencing Collaboratory #FundingOpportunity? Join the #NBSxWGS technical assistance #webinar, March 24th at 11 AM ET. Register: bit.ly/NBSxWGS_Webinar
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Early-career Malian scientists, submit a concept paper for the Donald Krogstad Award by April 9. Receive $25,000 US total for up to two years for research. tinyurl.com/5n6knas6
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ISCB nominations are open! Members can nominate candidates for ISCB leadership to help shape the Society's future. Learn more and submit your nominations here:  t.ly/x54_c
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Shape the future of evidence-based policy at #SciPol25! Dates: 18-20 August 2025 Join a forum for academics & #policymakers to discuss approaches for improving the uptake of #research into UK #SciencePolicy. Apply by 3 June⏰ Bursaries available💸 📎 bit.ly/3FfuWK9
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Hear from leaders in the field about enabling #PrecisionMedicine with #AI by integrating #MedicalImaging with other #Data types - join the #NIHCommonFund at the second day of this virtual workshop! See you there! go.nih.gov/awiS2id
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Some countries in the African region are experiencing cholera outbreaks. Here's everything you need to know about #cholera, its symptoms, and how to reduce your risk of infection ⬇️ #ViralFactsAfrica @viralfacts https://t.co/ds14Heu0GL
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Time is running out to apply! @HigherEduGovZA is offering fully funded scholarships (Bachelor’s, Master’s and PhD) to South African students to study in Germany. Details here: internationalscholarships.dhet.gov.za/index.php/scho…
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Interested in the integration of #AI with #MedicalImaging and other data types? Have ideas about how this can improve healthcare? Join the virtual conversation TODAY to help the #NIHCommonFund prioritize opportunities in this area! Register here: go.nih.gov/awiS2id
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EMBL-UNESCO #fellows: a call to female African scientists working in infection biology! 🦠 An opportunity to: 🥼 Gain wet lab and/or computational skills 🌍 Build an international scientific network We got your attention? Apply here: embl.org/about/info/sci… #infectiousdisease
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There’s just 1 more day until the #NIHCommonFund workshop about enabling #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types. Join the virtual conversation and share your ideas! March 11-12. Register today: go.nih.gov/awiS2id
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Today is the day! Submit you application by 5:00PM for the #ComplementARIE #FundingOpportunity to be a part of the #NewApproachMethodologies #data hub and coordinating center! go.nih.gov/3MBEmGy
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Check out the most recent UDN publication! ⭐️Key takeaway: Pathogenic #PPP2R5C variants cause a Houge-Janssens spectrum disorder with neurodevelopmental delay, hypotonia, epilepsy risk, and macrocephaly. @UDNForg pubmed.ncbi.nlm.nih.gov/39978342/
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Tune in tomorrow (3/11) at 11AM ET to help the #NIHCommonFund prioritize opportunities in enabling #PrecisionMedicine with #AI through the integration of #MedicalImaging with other #Data types. Register for this virtual workshop today: go.nih.gov/awiS2id
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Only a few more days until applications are due for the #ComplementARIE #FundingOpportunity to create the #NewApproachMethodologies #data hub and coordinating center! Submit by 5:00PM March 10th go.nih.gov/3MBEmGy
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Check out the 3 new #Research Hubs joining the #NIHCommonFund #CAREforHealth Program! They'll bring #ClinicalResearch opps for #depression, #anxiety, #arthritis & more to #PrimaryCare settings. Learn more: go.nih.gov/Usl28Fh
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The #NIHCommonFund Venture Program’s Newborn Screening by Whole Genome Sequencing (#NBSxWGS) Collaboratory issued a #FundingOpportunity! Learn more about this exciting initiative: commonfund.nih.gov/venture/NBSxWGS
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🎊 Successful 2025 in-person meeting 🎊 Reflecting on the great meeting in February! Great to connect face-to-face, welcome new network members, and discuss advances in diagnostics and better ways to support participants just a week before #RareDiseaseDay
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Check out the most recent UDN publication! ⭐️Key takeaway: #TAX1BP3 is associated with rare autosomal recessive Arrhythmogenic cardiomyopathy through #TRPV4-mediated Ca2+ leak from RyR2. @UDNForg pubmed.ncbi.nlm.nih.gov/39963794/
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📣Attention writers, teachers, and changemakers—the deadline to submit your essay for the contest has been extended until Sunday at 11:59 PM U.S. ET! Don't miss out on this extended opportunity to share your voice and ideas. Submit your essay now! 👇ashg.org/dna-day/ #ASHG
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New opportunity!🌟 @ASTMH 📢Call for Interest to serve on the Professor Dominic Kwiatkowski Fellowship Committee 📍Volunteer based 📍For early- to mid-career researchers in malaria genomics from malaria endemic countries Find out more ➡️ow.ly/Hpgi50VaQp8
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Passionate about public health genomics? Join PHA4GE and be part of a global network advancing open science, data sharing, and equitable genomics solutions. 🌍🔬 Become a member today! pha4ge.org/membership/ #PHA4GE #Genomics
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Only a few days left to submit your application to the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity. Submit your application before time runs out! commonfund.nih.gov/venture/NIOI #VentureNIOI
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#Bioinformatics is a powerful tool for #biologists working with #GenomicsData🧬 Our free online courses on bioinformatics workflows are available on demand until February 2026. From 10-30 March 2025, join our educators for a limited facilitation period in the comments 🔽
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To shape the future of malaria genomics training, we’re mapping the current landscape of available opportunities. Share your experience with any short courses, workshops, or hackathons focusing on analysing genomic data from malaria parasites &/or vectors docs.google.com/forms/d/e/1FAI…
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In honor of #WorldBirthDefectsDay #NIHCommonFund is highlighting the work of #KidsFirst program investigator, Dr. Azeez Butali, showing his use of program data to develop genetic insights on cleft palates. Stay up to date on more insights from Kids First: list.nih.gov/cgi-bin/wa.exe…
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Only 1 week left to apply to the #ComplementARIE #FundingOpp building the #NAMs #data hub and coordinating center! Submit your application today! go.nih.gov/3MBEmGy
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Join our March Journal Club with Brian Polo to explore new evidence on An. arabiensis in Kenya sanger.zoom.us/webinar/regist… His recent first-author preprint, based on genome data from ~500 mosquitoes, uncovers the genetic landscape of this major malaria vector researchsquare.com/article/rs-532…
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Calling all #NewApproachMethodologies researchers! The #NIHCommonFund has announced a #FundingOpp looking for #NAMs researchers to create and manage an integrated data structure for novel NAMs technologies. go.nih.gov/3MBEmGy
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Only one week left to submit your application to the #NIHCommonFund’s Advancing Non-Invasive #OpticalImaging Approaches for Biological Systems #FundingOpportunity. Apply now to be a part of the #VentureNIOI initiative! commonfund.nih.gov/venture/NIOI
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The HIDIVE Lab at @harvardmed is pleased to announce VUES on Spatial Biology - The Future of 3D Tissue Maps on March 11, 2025 — in person at Harvard Medical School in Boston. Sponsored by @NIH-funded @_hubmap. Free registration & more info: vues.events
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@phillyphaces1, helps kids with appearance differences soar socially, medically, and emotionally. #PhillyPhaces #Empowerment #CommunityCare #TogetherWeRise
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Replying to @satijalab
Papers led by incredible lab members John Blair @Longda_Jiang @carol_dalgarno We're using these methods in many of our projects now, and hope you will find them useful in your own work! Many thanks to our generous funders @_hubmap @cziscience and @genome_gov via @cegs_ica
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📢 Don't forget to tune in tomorrow (2/28) at 1PM ET for this #NIHCommonFund #NIH_CFDE webinar featuring Peter Park from @4DNucleome. Tune in 2/28 at 1PM ET to learn about mapping the #genome. Learn more: bit.ly/3vX6iJK #4DNucleome
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⏳ Last Chance for Early Bird Rates! 🗓️ Event Dates: April 22-24, 2025 📍 Location: Tampa, FL 👉 Register now: eventsquid.com/event/26215
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Harnessing AI in Bioinformatics: Unearthing Hidden Patterns for Accelerated Biomedical Discovery Presented by Dr. Musalula Sinkala #DSIAfrica
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AI Infectious Disease Symposium Presenting on Using AI to Support Science Presented by Prof. Nicky Mulder #DSIAfrica #AI
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🎊🏅 Congratulations to Shinya on receiving the 2025 Genetics Society of America Award – Early Career Medal!
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🚨 Early bird rates end 2/28! Don't miss your chance to register for the 2025 #Bridge2AI Voice Symposium. Attendees will learn about #AI/#ML in voice #biomarker #healthcare research. Register: eventsquid.com/event/26215 #NIHCommonFund
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Learn how to analyze data in CAVATICA, a cloud analysis platform, from Dr. David Higgins. See the tutorial: ecs.page.link/esG4e
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Join us on February 28th for our next installment of the #CFDEPublicWebinarSeries featuring @4DNucleome's Peter Park presenting "4D Nucleome Turns 10: Mapping the Dynamic Architecture of the Genome." Register for the event here: broadinstitute.zoom.us/webinar/regist… @CfdeWorkbench @CfdeNih
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The CFDE Workbench: Integrating Metadata and Processed Data from Common Fund Programs biorxiv.org/content/10.110… #biorxiv_bioinfo
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We have so many incredible speakers that will be presenting at our workshop on Friday! Join us to hear cutting edge scientific research from 10 AM - 2 PM ET. Registration is open here: tinyurl.com/mpmnmvrh @CfdeWorkbench @motrpac @TerraBioApp
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· Interested in applying to the #ComplementARIE #NewApproachMethodologies Data Hub and Coordinating Center #FundingOpp? Join the #InformationalWebinar on 2/13/25 at 11am ET! bit.ly/NDHCC_Webinar
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Just a few days left to register for the #NuclearArchitecture Meeting hosted by #4DNucleome! Join us in San Diego, CA on December 11-13, 2024. The deadline to register is Monday, December 2nd. Register today! bit.ly/3X9gha0
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#NutritionforPrecisionHealth is advancing precision #nutrition and was featured on @CBSSunday! The study is led by a coalition of NIH partners, including #NIHCommonFund, the Office of Nutrition Research, and @AllofUsResearch. Enrollment is open! Watch here allof-us.org/3UY1zkm
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Do you develop and market scientific tools? Join us tomorrow, November 22nd from 1-2 PM ET to learn various strategies from #COMPA and @MetaCell during our #CFDEPublicWebinarSeries. Register here: broadinstitute.zoom.us/webinar/regist… @CfdeWorkbench @NIH_CommonFund
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The @CfdeWorkbench team will showcase the #CFDE information portal (cfde.info), the #CFDE data portal (data.cfde.cloud), and #GeneSetCart (genesetcart.cfde.cloud) at #ASHG2024 #ASHG24. To learn more about the #CFDE visit booth 571. @NIH_CommonFund @CFDEKC https://t.co/tgdMOPiAb6
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It's almost time for #ASHG2024! Reminder, we have limited availability for exclusive 1:1 sessions at the #CFDE booth, grab yours before it's too late here: forms.gle/ioovRvfx3NA7SG…. Save travels and see you at Booth 571! @CfdeWorkbench @NIH_CommonFund
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Mark your calendars because we are ONE WEEK away from our #ASHG2024 Ancillary Session on the #CFDE! We look forward to seeing you all in Denver! @CfdeWorkbench @NIH_CommonFund @motrpac
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We are representing the Common Fund Data Ecosystem & debuting our #KnowledgeCenter Resource a #ASHG2024. Come by whenever (sign up below) to learn about how these 14 DCCs & 5 centers within the CFDE can be useful to you as a human geneticist @NIH_CommonFund @CfdeWorkbench
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Join us in two weeks ✌️ at our #ASHG2024 ancillary session: A Human Geneticists' Guide to the Common Fund Data Ecosystem! Hear perspectives by the @NIH_CommonFund, us at the KC, @CfdeWorkbench, @motrpac and @GTExPortal. Hope to see you there!
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Join us this Friday for the #CFDEPublicWebinarSeries featuring #MoTrPAC. Dr. Matthew Wheeler, Jimmy Zhen, & David Jimenez-Morales will present on the Data Hub, general MoTrPAC updates, upcoming data releases, and their pipelines/database structure #CFDE @CfdeWorkbench
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The Common Fund Data Ecosystem is hitting Denver this year, #ASHG2024. Visit our exhibition booth & learn about how the CFDE can support your research @CfdeWorkbench @NIH_CommonFund.
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Learn how @WVCTSI will bring clinical research opportunities to rural communities in West Virginia as one of three new national hubs of the #CAREforHealth network: wvctsi.org/news/story?hea…
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