Functional polymorphisms of interferon-gamma affect pneumonia-induced sepsis

PLoS One. 2014 Jan 24;9(1):e87049. doi: 10.1371/journal.pone.0087049. eCollection 2014.

Abstract

Objective: Sepsis is an inflammatory syndrome caused by infection, and both its incidence and mortality are high. Because interferon-gamma (IFN-γ) plays an important role in inflammation, this work assessed IFN-γ single nucleotide polymorphism (SNPs) that may be associated with sepsis.

Methods: A total of 196 patients with pneumonia-induced sepsis and 213 age- and sex-matched healthy volunteers participated in our study from July 2012 to July 2013 in Guangzhou, China. Patient clinical information was collected. Clinical pathology was assessed in subgroups defined based on clinical criteria, APACHE II (acute physiology and chronic health evaluation) and SOFA (sepsis-related organ failure assessment) scores and discharge rate. Four functional SNPs, -1616T/C (rs2069705), -764G/C (rs2069707), +874A/T (rs2430561) and +3234C/T (rs2069718), were genotyped by Snapshot in both sepsis patients and healthy controls. Pearson's chi-square test or Fisher's exact test were used to analyze the distribution of the SNPs, and the probability values (P values), odds ratios (OR) and 95% confidence intervals (CIs) were calculated.

Results: No mutations in the IFN-γ -764G/C SNP were detected among the participants in our study. The +874A/T and +3234C/T SNPs were in strong linkage disequilibrium (LD) (r(2) = 0.894). The -1616 TC+TT, +874 AT+AA genotype and the TAC haplotype were significantly associated with sepsis susceptibility, while the CTT haplotype was associated with protection against sepsis incidence. Genotype of -1616 TT wasn't only protective against severity of sepsis, but also against higher APACHE II and SOFA scores as +874 AA and +3234 CC. The TAC haplotype was was protective against progression to severe sepsis either.

Conclusion: Our results suggest that functional IFN-γ SNPs and their haplotypes are associated with pneumonia-induced sepsis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • APACHE
  • Adult
  • Aged
  • Aged, 80 and over
  • Case-Control Studies
  • Female
  • Genetic Predisposition to Disease
  • Haplotypes
  • Humans
  • Interferon-gamma / genetics*
  • Interferon-gamma / immunology
  • Linkage Disequilibrium
  • Male
  • Middle Aged
  • Odds Ratio
  • Pneumonia, Bacterial / complications
  • Pneumonia, Bacterial / genetics*
  • Pneumonia, Bacterial / immunology
  • Pneumonia, Bacterial / pathology
  • Polymorphism, Single Nucleotide*
  • Promoter Regions, Genetic
  • Sepsis / etiology
  • Sepsis / genetics*
  • Sepsis / immunology
  • Sepsis / pathology
  • Severity of Illness Index

Substances

  • Interferon-gamma

Grants and funding

This work was supported by Guangdong Provincial Natural Science Foundation S2013040012649, the new teacher project of Education Ministry 20134423120005, the National Natural Science Funds of China 81202604, the Department of Health of Guangdong Province for young scholars B2012169, the Doctor startup foundation project from Guangzhou Medical University 2011C41. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.