| Caudal type homeobox 1 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Identifiers | |||||||||||||
| Symbols | CDX1; MGC116915 | ||||||||||||
| External IDs | OMIM: 600746 MGI: 88360 HomoloGene: 1366 GeneCards: CDX1 Gene | ||||||||||||
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| RNA expression pattern | |||||||||||||
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| More reference expression data | |||||||||||||
| Orthologs | |||||||||||||
| Species | Human | Mouse | |||||||||||
| Entrez | 1044 | 12590 | |||||||||||
| Ensembl | ENSG00000113722 | ENSMUSG00000024619 | |||||||||||
| UniProt | P47902 | P18111 | |||||||||||
| RefSeq (mRNA) | NM_001804.2 | NM_009880.3 | |||||||||||
| RefSeq (protein) | NP_001795.2 | NP_034010.3 | |||||||||||
| Location (UCSC) | Chr 5: 149.55 – 149.57 Mb |
Chr 18: 61.18 – 61.2 Mb |
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| PubMed search | [1] | [2] | |||||||||||
Homeobox protein CDX-1 is a protein that in humans is encoded by the CDX1 gene.[1][2]
This gene is a member of the caudal-related homeobox transcription factor gene family. The encoded DNA-binding protein regulates intestine-specific gene expression and enterocyte differentiation. It has been shown to induce expression of the intestinal alkaline phosphatase gene, and inhibit beta-catenin/T-cell factor transcriptional activity.[2]
References [link]
- ^ Bonner CA, Loftus SK, Wasmuth JJ (Feb 1996). "Isolation, characterization, and precise physical localization of human CDX1, a caudal-type homeobox gene". Genomics 28 (2): 206–11. DOI:10.1006/geno.1995.1132. PMID 8530027.
- ^ a b "Entrez Gene: CDX1 caudal type homeobox transcription factor 1". https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=1044.
Further reading [link]
- Dixon, Jill; Edwards, Sara J.; Gladwin, Amanda J.; Dixon, Michael J.; Loftus, Stacie K.; Bonner, Cynthia A.; Koprivnikar, Kathryn; Wasmuth, John J. (1996). "Positional cloning of a gene involved in the pathogenesis of Treacher Collins syndrome. The Treacher Collins Syndrome Collaborative Group". Nat. Genet. 12 (2): 130–6. DOI:10.1038/ng0296-130. PMID 8563749.
- Mallo GV, Rechreche H, Frigerio JM, et al. (1997). "Molecular cloning, sequencing and expression of the mRNA encoding human Cdx1 and Cdx2 homeobox. Down-regulation of Cdx1 and Cdx2 mRNA expression during colorectal carcinogenesis". Int. J. Cancer 74 (1): 35–44. DOI:10.1002/(SICI)1097-0215(19970220)74:1<35::AID-IJC7>3.0.CO;2-1. PMID 9036867.
- Mizoshita T, Inada K, Tsukamoto T, et al. (2002). "Expression of Cdx1 and Cdx2 mRNAs and relevance of this expression to differentiation in human gastrointestinal mucosa--with special emphasis on participation in intestinal metaplasia of the human stomach". Gastric Cancer 4 (4): 185–91. DOI:10.1007/PL00011741. PMID 11846061.
- Suh ER, Ha CS, Rankin EB, et al. (2002). "DNA methylation down-regulates CDX1 gene expression in colorectal cancer cell lines". J. Biol. Chem. 277 (39): 35795–800. DOI:10.1074/jbc.M205567200. PMID 12124393.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. DOI:10.1073/pnas.242603899. PMC 139241. PMID 12477932. //www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=139241.
- Domon-Dell C, Schneider A, Moucadel V, et al. (2003). "Cdx1 homeobox gene during human colon cancer progression". Oncogene 22 (39): 7913–21. DOI:10.1038/sj.onc.1206756. PMID 12970739.
- Wong NA, Britton MP, Choi GS, et al. (2004). "Loss of CDX1 expression in colorectal carcinoma: Promoter methylation, mutation, and loss of heterozygosity analyses of 37 cell lines". Proc. Natl. Acad. Sci. U.S.A. 101 (2): 574–9. DOI:10.1073/pnas.0307190101. PMC 327189. PMID 14704280. //www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=327189.
- Rankin EB, Xu W, Silberg DG, Suh E (2004). "Putative intestine-specific enhancers located in 5' sequence of the CDX1 gene regulate CDX1 expression in the intestine". Am. J. Physiol. Gastrointest. Liver Physiol. 286 (5): G872–80. DOI:10.1152/ajpgi.00326.2003. PMID 14715525.
- Béland M, Pilon N, Houle M, et al. (2004). "Cdx1 Autoregulation Is Governed by a Novel Cdx1-LEF1 Transcription Complex". Mol. Cell. Biol. 24 (11): 5028–38. DOI:10.1128/MCB.24.11.5028-5038.2004. PMC 416402. PMID 15143193. //www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=416402.
- Guo RJ, Huang E, Ezaki T, et al. (2004). "Cdx1 inhibits human colon cancer cell proliferation by reducing beta-catenin/T-cell factor transcriptional activity". J. Biol. Chem. 279 (35): 36865–75. DOI:10.1074/jbc.M405213200. PMID 15215241.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. DOI:10.1101/gr.2596504. PMC 528928. PMID 15489334. //www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=528928.
- Alkhoury F, Malo MS, Mozumder M, et al. (2005). "Differential regulation of intestinal alkaline phosphatase gene expression by Cdx1 and Cdx2". Am. J. Physiol. Gastrointest. Liver Physiol. 289 (2): G285–90. DOI:10.1152/ajpgi.00037.2005. PMID 15774940.
- Wong NA, Wilding J, Bartlett S, et al. (2005). "CDX1 is an important molecular mediator of Barrett's metaplasia". Proc. Natl. Acad. Sci. U.S.A. 102 (21): 7565–70. DOI:10.1073/pnas.0502031102. PMC 1140438. PMID 15894614. //www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1140438.
External links [link]
- CDX1+protein,+human at the US National Library of Medicine Medical Subject Headings (MeSH)
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https://wn.com/CDX1
Human Genome Organisation
The Human Genome Organisation (HUGO) is an organization involved in the Human Genome Project, a project about mapping the human genome. HUGO was established in 1989 as an international organization, primarily to foster collaboration between genome scientists around the world. The HUGO Gene Nomenclature Committee (HGNC), sometimes referred to as "HUGO", is one of HUGO's most active committees and aims to assign a unique gene name and symbol to each human gene.
History
HUGO was established in late April 1988 at the first meeting dedicated to genome mapping at Cold Spring Harbor. The idea of starting the organization stemmed from a South African biologist by the name of Sydney Brenner, who is known for his significant contributions to work on the genetic code and other areas of molecular biology, as well as winning the Nobel prize in Physiology of Medicine in 2002. A Founding Council was elected at the meeting that total 42 scientists from 17 different countries. HUGO is grounded in Geneva Switzerland, and later went on to elect an additional 178 members, bringing the total up to 220.
This page contains text from Wikipedia, the Free Encyclopedia - https://wn.com/Human_Genome_Organisation
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