matplotlib-users Mailing List for matplotlib (Page 2)

On Mon, Mar 30, 2009 at 1:34 PM, C M <cmp...@gm...> wrote:

> I've got the NavigationToolbar2 going nicely on my app
> (OO, embedded in wx, mpl 0.98.5), and was wondering
> how difficult it might be to change how the pan works,
> in the following way...
>
> Right now, when I show a plot, I am grabbing a subset
> of data from the database.  Panning within that plot
> allows exploration of *just that data*.  E.g., if I have
> values between x = 100 and x = 200, I can pan past
> either of these values, but there are no more data points
> beyond that, because I didn't fetch those points when I
> created the plot.
>
> What would be nice is if, on panning, I could fetch
> new points, namely those that are found in that part of
> the x axis.  This would be just like Google Maps' ability
> to allow one to pan the map over and see new land area,
> because it fetches those land patches of the map.
>
> I could of course just fetch all the data I have first
> and set the x limits to show the requested subset
> of data initially, but I thought maybe it would
> be more efficient to only get what is requested and
> then grab more data on pans.  I thought I'd ask if
> anyone had done something like this already.


In SVN trunk, there is an example in examples/event_handling/viewlims.py
that redraws a fractal when you zoom in.  You could probably adopt a similar
approach to grab new data points, though the details would depend on the
type of plot.

Ryan

-- 
Ryan May
Graduate Research Assistant
School of Meteorology
University of Oklahoma
Sent from Enterprise, Alabama, United States

Me and my team are almost to the finishing point.  Our final problem is
getting the graph to update. 

When we run the graph the get the following issue: "
Traceback (most recent call last):
  File "/home/gnelson/scc08whole/branch/realistic2d/gtkgui.py", line 100, in
update
    self.ax.draw_artist(plt.contourf)
  File "/usr/lib/python2.5/site-packages/matplotlib/axes.py", line 1535, in
draw_artist
    a.draw(self._cachedRenderer)
AttributeError: 'function' object has no attribute 'draw'"

Our Code is at: " http://code.google.com/p/scc08/ " 

and we are using the gtkgui.py

import time
import gtk, gobject
import matplotlib
matplotlib.use('GTKAgg')
import matplotlib.pyplot as plt
from driver import Driver

import numpy as np


class Gui:

    def updateData(self):
        self.updateTemps()
        self.getMats()
        self.addTimeSteps()
        self.getAirPts()
        self.getGroundPts()
        self.getBridgePts()

    def updateTemps(self):
        self.temps = []
        temp = self.dr.myGrid.fields
        for i in range(len(temp)):
            self.temps.append([])
            for j in range(len(temp[i])):
                self.temps[i].append(temp[i][j].temperature)

    def getMats(self):
        self.mats = []
        temp = self.dr.myGrid.fields
        for i in range(len(temp)):
            self.mats.append([])
            for j in range(len(temp[i])):
                self.mats[i].append(temp[i][j].density)
        self.mats

    def setUserInput(self):
        str = raw_input("What do you want: Ground or Air? (The default is
air) \n")
        if(str == "Ground" or str == "ground"):
            self.type = 1
        else:
            self.type = 2

    def getAirPts(self):
        temp = self.dr.myGrid.fields
        for i in range(len(temp)):
            for j in range(len(temp[i])):
                if(temp[i][j].material == 'air'):
                    self.airData.append(temp[i][j].temperature)
                    return

    def getBridgePts(self):
        temp = self.dr.myGrid.fields
        for i in range(len(temp)):
            for j in range(len(temp[i])):
                if(temp[i][j].material == 'concrete'):
                    self.bridgeData.append(temp[i][j].temperature)
                    return

    def getGroundPts(self):
        if (type == 1):
            return None
        else:
            temp = self.dr.myGrid.fields
            for i in range(len(temp)):
                for j in range(len(temp[i])):
                    if(temp[i][j].material == 'soil'):
                        self.groundData.append(temp[i][j].temperature)
                        return

    def addTimeSteps(self):
        self.time.append(self.step)

    def update(self, *args):
        print "WTF Delta?!?"
        self.step = 0
        if self.background is None:
            self.background = self.canvas.copy_from_bbox(self.ax.bbox)
        self.updateData()
        # restore the clean slate background
        self.canvas.restore_region(self.background)
        # update the data
        print "GROUND DATA:"
        print len(self.groundData)
        print "TIME DATA"
        print len(self.time)
        if(self.type != 2):
            self.groundLine = self.ax.plot(self.groundData , self.time,
'g-+')
            self.bridgeLine = self.ax.plot(self.bridgeData , self.time,
'r-o')
            self.airLine = self.ax.plot(self.airData, self.time, 'b-s')

        self.contour = self.ax2.contourf(self.temps)
        self.colorbar = self.fig.colorbar(self.contour)
        # just draw the animated artist
        self.ax.draw_artist(self.groundLine)
        self.ax.draw_artist(self.airLine)
        self.ax.draw_artist(self.bridgeLine)
        self.ax.draw_artist(plt.contourf)
#        self.ax.draw_artist(colorbar)
        # just redraw the axes rectangle
        self.canvas.blit(self.ax.bbox)

        self.cnt += 1
        self.step += .004
        self.dr.run(10)
        self.time.append(self.step*10)
        return True

    update.cnt = 0
    update.background = None

    def setup(self):
        self.fig = plt.figure()
        self.ax = self.fig.add_subplot(211)
        self.ax2 = self.fig.add_subplot(212)
        self.canvas = self.fig.canvas
        self.ax.grid() # to ensure proper background restore
        self.canvas.draw()
        # create some globals
        self.airData = []
        self.groundData = []
        self.bridgeData = []
        self.time = []
        self.step = 0
        self.setUserInput()
        self.temps = []
        self.mats = []
        self.dr = Driver(.5, .5, 0.0004, type, (7,7,9,9), (16,16))
        self.cnt = 0
        self.background = None
         # don't use time steps over 4 * 10 ** -4
        self.updateTemps()
        self.gmats = self.getMats()
        # create the initial graphs
        self.contour = self.ax2.contourf(self.temps)
        self.colorbar = self.fig.colorbar(self.contour)
        self.groundLine, = self.ax.plot(self.groundData , self.time, 'g-+')
        self.bridgeLine, = self.ax.plot(self.bridgeData , self.time, 'r-o')
        self.airLine, = self.ax.plot(self.airData , self.time, 'b-s')
        
if __name__ == "__main__":
    mygui = Gui()

    def start_anim(event):
        gobject.idle_add(mygui.update)
        mygui.canvas.mpl_disconnect(start_anim.cid)
        

    mygui.setup()
    start_anim.cid = mygui.canvas.mpl_connect('draw_event', start_anim)
    plt.show()

-- 
View this message in context: http://www.nabble.com/We-are-on-the-Home-strech-and-NEED-help-tp22795527p22795527.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

Dear Matplotlib Folks,

When I run pylab.plot, I get a weird warning:

** (python:20754): WARNING **: Couldn't connect to system bus

** (python:20754): WARNING **: Couldn't connect to system bus
<matplotlib.lines.Line2D object at 0x1225850>

(Note that this was copied by hand because the system on which I run
Matplotlib is currently unable to connect to the global internet.)

The first line really is repeated.

The number after "python:" changes from one instance of the warning to
another.

I am running:

Red Hat Enterprise Linux ES release 4 (Nahant Update 3)

At least, that is what is in /etc/redhat-release.

The warning is not fatal and I can display what I attempted to plot with
pylab.show.  However, the warning has a significant impact on the
interactive usability of Python and matplotlib as a replacement for Matlab.

Anyone have any suggestions or observations?

Yours,
David Sigeti
-- 
View this message in context: http://www.nabble.com/Warning-from-pylab.plot-on-Linux-tp22793709p22793709.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

Jeff - Copying the rest of the files solved the problem.  Thanks!

--Mike
Jeff Whitaker wrote:
> Michael Hearne wrote:
>> I am experimenting with the Enthought Python Distribution (EPD) on 
>> MacOS 10.5, which includes BaseMap version 0.99.1.  I have existing 
>> modules that use the 'full' resolution data.  These modules are 
>> currently failing with the error message below.
>>
>> I have tried copying what looked like the full resolution data sets 
>> (gshhs_f.dat and gshhsmeta_f.dat) from my 0.99.2 source installation 
>> into the EPD basemap data directory, and rerun my scripts, with no 
>> success.
>>
>> I looked at my most recent copy of the basemap README and cannot find 
>> any reference to the boundary datasets.
>>
>> So, a question for Jeff, and a request for Enthought:
>> 1) How do I update the EPD with the full resolution data
>> 2) Can the EPD be updated to include the full resolution boundary data?
>>
>> Thanks,
>>
>> Mike
>>
>> ***************************
>> IOError: Unable to open boundary dataset file. Only the 'crude', 'low',
>> 'intermediate' and 'high' resolution datasets are installed by default.
>> If you are requesting a 'full' resolution dataset, you may need to
>> download and install those files separately
>> (see the basemap README for details).
>> Exception caught: Unable to open boundary dataset file. Only the 
>> 'crude', 'low',
>> 'intermediate' and 'high' resolution datasets are installed by default.
>> If you are requesting a 'full' resolution dataset, you may need to
>> download and install those files separately
>> (see the basemap README for details).
>> ***************************
>>
>> ------------------------------------------------------------------------------ 
>>
>> _______________________________________________
>> Matplotlib-users mailing list
>> Mat...@li...
>> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>>   
> Mike:  To save space, the EPD folks took out the full resolution 
> datasets.  Manually copying the files should work - are you sure you 
> got them in the right place (the mpl_toolkits/basemap/data 
> directory)?  You probably have to copy more than the gshhs file (the 
> states, rivers and countries too).
>
> -Jeff
>

Michael Hearne wrote:
> I am experimenting with the Enthought Python Distribution (EPD) on MacOS 
> 10.5, which includes BaseMap version 0.99.1.  I have existing modules 
> that use the 'full' resolution data.  These modules are currently 
> failing with the error message below.
>
> I have tried copying what looked like the full resolution data sets 
> (gshhs_f.dat and gshhsmeta_f.dat) from my 0.99.2 source installation 
> into the EPD basemap data directory, and rerun my scripts, with no success.
>
> I looked at my most recent copy of the basemap README and cannot find 
> any reference to the boundary datasets.
>
> So, a question for Jeff, and a request for Enthought:
> 1) How do I update the EPD with the full resolution data
> 2) Can the EPD be updated to include the full resolution boundary data?
>
> Thanks,
>
> Mike
>
> ***************************
> IOError: Unable to open boundary dataset file. Only the 'crude', 'low',
> 'intermediate' and 'high' resolution datasets are installed by default.
> If you are requesting a 'full' resolution dataset, you may need to
> download and install those files separately
> (see the basemap README for details).
> Exception caught: Unable to open boundary dataset file. Only the 
> 'crude', 'low',
> 'intermediate' and 'high' resolution datasets are installed by default.
> If you are requesting a 'full' resolution dataset, you may need to
> download and install those files separately
> (see the basemap README for details).
> ***************************
>
> ------------------------------------------------------------------------------
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>   
Mike:  To save space, the EPD folks took out the full resolution 
datasets.  Manually copying the files should work - are you sure you got 
them in the right place (the mpl_toolkits/basemap/data directory)?  You 
probably have to copy more than the gshhs file (the states, rivers and 
countries too).

-Jeff

-- 
Jeffrey S. Whitaker         Phone  : (303)497-6313
Meteorologist               FAX    : (303)497-6449
NOAA/OAR/PSD  R/PSD1        Email  : Jef...@no...
325 Broadway                Office : Skaggs Research Cntr 1D-113
Boulder, CO, USA 80303-3328 Web    : http://tinyurl.com/5telg

I am experimenting with the Enthought Python Distribution (EPD) on MacOS 
10.5, which includes BaseMap version 0.99.1.  I have existing modules 
that use the 'full' resolution data.  These modules are currently 
failing with the error message below.

I have tried copying what looked like the full resolution data sets 
(gshhs_f.dat and gshhsmeta_f.dat) from my 0.99.2 source installation 
into the EPD basemap data directory, and rerun my scripts, with no success.

I looked at my most recent copy of the basemap README and cannot find 
any reference to the boundary datasets.

So, a question for Jeff, and a request for Enthought:
1) How do I update the EPD with the full resolution data
2) Can the EPD be updated to include the full resolution boundary data?

Thanks,

Mike

***************************
IOError: Unable to open boundary dataset file. Only the 'crude', 'low',
'intermediate' and 'high' resolution datasets are installed by default.
If you are requesting a 'full' resolution dataset, you may need to
download and install those files separately
(see the basemap README for details).
Exception caught: Unable to open boundary dataset file. Only the 
'crude', 'low',
'intermediate' and 'high' resolution datasets are installed by default.
If you are requesting a 'full' resolution dataset, you may need to
download and install those files separately
(see the basemap README for details).
***************************

I've got the NavigationToolbar2 going nicely on my app
(OO, embedded in wx, mpl 0.98.5), and was wondering
how difficult it might be to change how the pan works,
in the following way...

Right now, when I show a plot, I am grabbing a subset
of data from the database.  Panning within that plot
allows exploration of *just that data*.  E.g., if I have
values between x = 100 and x = 200, I can pan past
either of these values, but there are no more data points
beyond that, because I didn't fetch those points when I
created the plot.

What would be nice is if, on panning, I could fetch
new points, namely those that are found in that part of
the x axis.  This would be just like Google Maps' ability
to allow one to pan the map over and see new land area,
because it fetches those land patches of the map.

I could of course just fetch all the data I have first
and set the x limits to show the requested subset
of data initially, but I thought maybe it would
be more efficient to only get what is requested and
then grab more data on pans.  I thought I'd ask if
anyone had done something like this already.

Thanks,
Che

As Darren said, normed=1 means that the integral of the histogram is
normalized to one, not the height. In other words, the total area under the
histogram curve is set to one.

Imagine a histogram with a single bin. If the width of the bin is less than
one, the height must be greater than one in order for the area to equal one.
Therefore the y-axis scale can be greater than one even when normed=1.

-Roban

On Mon, Mar 30, 2009 at 12:11 PM, Bala subramanian <
bal...@gm...> wrote:

> There was a typo in my previous mail.
> y axis goes scale is more than one when i use normed=1. I am not getting
> why this happens.
>
>
> On Mon, Mar 30, 2009 at 6:10 PM, Bala subramanian <
> bal...@gm...> wrote:
>
>>
>>
>>
>> Darren,
>>> But y axis goes scale is than one when i use normed=1. I am not getting
>>> why this happens.
>>>
>>>
>>> On Mon, Mar 30, 2009 at 5:39 PM, Darren Dale <dsd...@gm...> wrote:
>>>
>>>> On Mon, Mar 30, 2009 at 11:25 AM, Bala subramanian <
>>>> bal...@gm...> wrote:
>>>>
>>>>> Friends,
>>>>>
>>>>> I tried to plot a histogram and pdf of my data (data file attached
>>>>> 1.dat). When i see the figure (attached file test.png) , i see y axis more
>>>>> than 1 (although it should not when i use normed=1. I am not getting why
>>>>> this happens.
>>>>>
>>>>> Somebody kindly write me i) Why the y-axis scales more than 1 ii) after
>>>>> plotting histogram and pdf, how to delete the histogram and show only the
>>>>> normal curve.
>>>>>
>>>>> The following are the commands i used.
>>>>> data=load('1.dat')
>>>>> x=[:,1]
>>>>> mu=mean(x);st=std(x)
>>>>> n,bins,patch=hist(x,50,normed=1,histtype='stepfilled')
>>>>> y = normpdf( bins, mu, st)
>>>>> plot(bins, y, 'k--', linewidth=1.5)
>>>>>
>>>>
>>>> hist plots a distribution whose integral is 1.
>>>>
>>>
>>>
>>
>
>
> ------------------------------------------------------------------------------
>
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>
>

There was a typo in my previous mail.
y axis goes scale is more than one when i use normed=1. I am not getting why
this happens.


On Mon, Mar 30, 2009 at 6:10 PM, Bala subramanian <bal...@gm...
> wrote:

>
>
>
> Darren,
>> But y axis goes scale is than one when i use normed=1. I am not getting
>> why this happens.
>>
>>
>> On Mon, Mar 30, 2009 at 5:39 PM, Darren Dale <dsd...@gm...> wrote:
>>
>>> On Mon, Mar 30, 2009 at 11:25 AM, Bala subramanian <
>>> bal...@gm...> wrote:
>>>
>>>> Friends,
>>>>
>>>> I tried to plot a histogram and pdf of my data (data file attached
>>>> 1.dat). When i see the figure (attached file test.png) , i see y axis more
>>>> than 1 (although it should not when i use normed=1. I am not getting why
>>>> this happens.
>>>>
>>>> Somebody kindly write me i) Why the y-axis scales more than 1 ii) after
>>>> plotting histogram and pdf, how to delete the histogram and show only the
>>>> normal curve.
>>>>
>>>> The following are the commands i used.
>>>> data=load('1.dat')
>>>> x=[:,1]
>>>> mu=mean(x);st=std(x)
>>>> n,bins,patch=hist(x,50,normed=1,histtype='stepfilled')
>>>> y = normpdf( bins, mu, st)
>>>> plot(bins, y, 'k--', linewidth=1.5)
>>>>
>>>
>>> hist plots a distribution whose integral is 1.
>>>
>>
>>
>

Darren,
> But y axis goes scale is than one when i use normed=1. I am not getting why
> this happens.
>
>
> On Mon, Mar 30, 2009 at 5:39 PM, Darren Dale <dsd...@gm...> wrote:
>
>> On Mon, Mar 30, 2009 at 11:25 AM, Bala subramanian <
>> bal...@gm...> wrote:
>>
>>> Friends,
>>>
>>> I tried to plot a histogram and pdf of my data (data file attached
>>> 1.dat). When i see the figure (attached file test.png) , i see y axis more
>>> than 1 (although it should not when i use normed=1. I am not getting why
>>> this happens.
>>>
>>> Somebody kindly write me i) Why the y-axis scales more than 1 ii) after
>>> plotting histogram and pdf, how to delete the histogram and show only the
>>> normal curve.
>>>
>>> The following are the commands i used.
>>> data=load('1.dat')
>>> x=[:,1]
>>> mu=mean(x);st=std(x)
>>> n,bins,patch=hist(x,50,normed=1,histtype='stepfilled')
>>> y = normpdf( bins, mu, st)
>>> plot(bins, y, 'k--', linewidth=1.5)
>>>
>>
>> hist plots a distribution whose integral is 1.
>>
>
>

that fixed it.. thanks!


On Mon, Mar 30, 2009 at 11:02 AM, John Hunter <jd...@gm...> wrote:

>
>
> On Mon, Mar 30, 2009 at 8:22 AM, Tyler B <bo...@gm...> wrote:
>
>> My graph, which had been working just fine, randomly decided to stop
>> filling the width of the x-axis:    http://screencast.com/t/vr3AaXIq
>>
>> Here's the code I'm using (nothing fancy.. I took out all unnecessary
>> formatting and it didn't help):
>>
>> fig = plt.figure(facecolor ='w', frameon=False)
>> ax = plt.subplot(111)
>> lines = ax.plot(r_dates, r_inbox, 'w-')
>>
>> I'm out of ideas.. what could be causing this?
>
>
>
> Sorry, I'm not sure what "filling the width of the x-axis" means or what
> you are expecting to see.  If you want to the x and y limits to be collapsed
> to your data limits, you need to do
>
>   ax.axis('tight')
>
> JDH
>
>

On Mon, Mar 30, 2009 at 11:25 AM, Bala subramanian <
bal...@gm...> wrote:

> Friends,
>
> I tried to plot a histogram and pdf of my data (data file attached 1.dat).
> When i see the figure (attached file test.png) , i see y axis more than 1
> (although it should not when i use normed=1. I am not getting why this
> happens.
>
> Somebody kindly write me i) Why the y-axis scales more than 1 ii) after
> plotting histogram and pdf, how to delete the histogram and show only the
> normal curve.
>
> The following are the commands i used.
> data=load('1.dat')
> x=[:,1]
> mu=mean(x);st=std(x)
> n,bins,patch=hist(x,50,normed=1,histtype='stepfilled')
> y = normpdf( bins, mu, st)
> plot(bins, y, 'k--', linewidth=1.5)
>

hist plots a distribution whose integral is 1.

On Mon, Mar 30, 2009 at 8:22 AM, Tyler B <bo...@gm...> wrote:

> My graph, which had been working just fine, randomly decided to stop
> filling the width of the x-axis:    http://screencast.com/t/vr3AaXIq
>
> Here's the code I'm using (nothing fancy.. I took out all unnecessary
> formatting and it didn't help):
>
> fig = plt.figure(facecolor ='w', frameon=False)
> ax = plt.subplot(111)
> lines = ax.plot(r_dates, r_inbox, 'w-')
>
> I'm out of ideas.. what could be causing this?



Sorry, I'm not sure what "filling the width of the x-axis" means or what you
are expecting to see.  If you want to the x and y limits to be collapsed to
your data limits, you need to do

  ax.axis('tight')

JDH

My graph, which had been working just fine, randomly decided to stop filling
the width of the x-axis:    http://screencast.com/t/vr3AaXIq

Here's the code I'm using (nothing fancy.. I took out all unnecessary
formatting and it didn't help):

fig = plt.figure(facecolor ='w', frameon=False)
ax = plt.subplot(111)
lines = ax.plot(r_dates, r_inbox, 'w-')

I'm out of ideas.. what could be causing this?

Thanks!
Tyler

which kind of data file? ascii? If yes, numpy.loadtxt will be your friend.
Johann

Bala subramanian wrote:
> Friends,
>
> Kindly give me some tips on how to import data from a data file to 
> make the plot.
>
> Thanks,
> Bala
> ------------------------------------------------------------------------
>
> ------------------------------------------------------------------------------
>   
> ------------------------------------------------------------------------
>
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>   

which kind of data file? ascii? If yes, numpy.loadtxt will be your friend.
Johann

Bala subramanian wrote:
> Friends,
>
> Kindly give me some tips on how to import data from a data file to 
> make the plot.
>
> Thanks,
> Bala
> ------------------------------------------------------------------------
>
> ------------------------------------------------------------------------------
>   
> ------------------------------------------------------------------------
>
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>   

I don't know if this is because I upgraded to the current developement  
version of numpy or not, but I when I tried rebuilding matplotlib, I  
generated the following error:

gcc -fno-strict-aliasing -mno-fused-madd -DNDEBUG -g -fwrapv -O3 -Wall  
-Wstrict-prototypes -I/opt/lib/python2.5/site-packages/numpy/core/ 
include -I/sw/include/python2.5 -c src/_macosx.m -o build/ 
temp.macosx-10.5-i386-2.5/src/_macosx.o
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSAffineTransform.h:5,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:13,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSObject.h: 
122: error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSGeometry.h:7,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSAffineTransform.h:6,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:13,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSCoder.h:79:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSCoder.h:87:  
error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:15,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSArray.h:62:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSArray.h:66:  
error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSAttributedString.h:5,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:16,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
345: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
346: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
347: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
348: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
349: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
350: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
352: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
353: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
355: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
356: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
357: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
358: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
360: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
361: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
362: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
363: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSString.h: 
364: error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSAttributedString.h:6,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:16,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSDictionary.h: 
45: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSDictionary.h: 
50: error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSHashTable.h:5,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:43,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:59: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:59: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘NSUInteger’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:60: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:60: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘BOOL’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:61: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:61: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘NSUInteger’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:62: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:62: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘NSString’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:65: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:65: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘void’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:66: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:66: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘void’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:69: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:69: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘BOOL’
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:70: error: stray ‘@’ in program
/System/Library/Frameworks/Foundation.framework/Headers/ 
NSPointerFunctions.h:70: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘BOOL’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSKeyValueCoding.h:9,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:49,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSSet.h:45:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSSet.h:50:  
error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:76,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSRunLoop.h: 
44: error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/NSURL.h:6,
                  from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:88,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
52: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
53: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
54: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
55: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
56: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
67: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
68: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
70: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
71: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
73: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
74: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
76: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
77: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
79: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
80: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
83: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
86: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
89: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
90: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
93: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
94: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
95: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
97: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
98: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
99: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
100: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
102: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
103: error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURLHandle.h: 
104: error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/Foundation.framework/ 
Headers/Foundation.h:88,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:12,
                  from src/_macosx.m:1:
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:75:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:76:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:77:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:78:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:83:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:84:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:85:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:88:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:89:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/Foundation.framework/Headers/NSURL.h:91:  
error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:19,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSApplication.h: 
68: error: expected specifier-qualifier-list before ‘__weak’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:27,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:215:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:216:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:217:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:218:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:219:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:220:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:221:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:222:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:223:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:224:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:227:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:228:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:229:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:230:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:231:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSFont.h:232:  
error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/NSPanel.h:8,
                  from /System/Library/Frameworks/AppKit.framework/ 
Headers/NSFontPanel.h:8,
                  from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:30,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:471:  
error: expected ‘;’ before ‘__attribute__’
/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:472:  
error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:78,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSPrintPanel.h:57:  
error: stray ‘@’ in program
/System/Library/Frameworks/AppKit.framework/Headers/NSPrintPanel.h:61:  
error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘-’ token
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:95,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSTrackingArea.h: 
44: error: expected specifier-qualifier-list before ‘__weak’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/NSTextView.h:16,
                  from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:112,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/ 
NSTextInputClient.h:17: error: stray ‘@’ in program
/System/Library/Frameworks/AppKit.framework/Headers/ 
NSTextInputClient.h:20: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘-’ token
/System/Library/Frameworks/AppKit.framework/Headers/ 
NSTextInputClient.h:62: error: stray ‘@’ in program
/System/Library/Frameworks/AppKit.framework/Headers/ 
NSTextInputClient.h:65: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or  
‘__attribute__’ before ‘-’ token
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:153,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSATSTypesetter.h: 
46: error: expected ‘;’ before ‘__attribute__’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/NSObjectController.h:10,
                  from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:158,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/NSFetchRequest.h: 
24: error: expected specifier-qualifier-list before ‘__weak’
In file included from /System/Library/Frameworks/CoreData.framework/ 
Headers/NSAttributeDescription.h:10,
                  from /System/Library/Frameworks/AppKit.framework/ 
Headers/NSPredicateEditorRowTemplate.h:13,
                  from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:175,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSPropertyDescription.h:25: error: expected specifier-qualifier-list  
before ‘__weak’
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:176,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSPathCell.h:148:  
error: stray ‘@’ in program
/System/Library/Frameworks/AppKit.framework/Headers/NSPathCell.h:152:  
error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘-’ token
In file included from /System/Library/Frameworks/AppKit.framework/ 
Headers/AppKit.h:177,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:13,
                  from src/_macosx.m:1:
/System/Library/Frameworks/AppKit.framework/Headers/NSPathControl.h: 
73: error: stray ‘@’ in program
/System/Library/Frameworks/AppKit.framework/Headers/NSPathControl.h: 
77: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘-’  
token
In file included from /System/Library/Frameworks/CoreData.framework/ 
Headers/CoreData.h:14,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:14,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSEntityDescription.h:28: error: expected specifier-qualifier-list  
before ‘__weak’
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSEntityDescription.h:32: error: expected specifier-qualifier-list  
before ‘__weak’
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSEntityDescription.h:33: error: expected specifier-qualifier-list  
before ‘__weak’
In file included from /System/Library/Frameworks/CoreData.framework/ 
Headers/CoreData.h:17,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:14,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSRelationshipDescription.h:28: error: expected specifier-qualifier- 
list before ‘__weak’
In file included from /System/Library/Frameworks/CoreData.framework/ 
Headers/CoreData.h:22,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:14,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSManagedObject.h:26: error: expected specifier-qualifier-list before  
‘__weak’
In file included from /System/Library/Frameworks/CoreData.framework/ 
Headers/CoreData.h:25,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:14,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSPersistentStoreCoordinator.h:172: error: expected ‘;’ before  
‘__attribute__’
In file included from /System/Library/Frameworks/CoreData.framework/ 
Headers/CoreData.h:27,
                  from /System/Library/Frameworks/Cocoa.framework/ 
Headers/Cocoa.h:14,
                  from src/_macosx.m:1:
/System/Library/Frameworks/CoreData.framework/Headers/ 
NSPersistentStore.h:16: error: expected specifier-qualifier-list  
before ‘__weak’
error: command 'gcc' failed with exit status 1


The settings detected by the script are:
BUILDING MATPLOTLIB
             matplotlib: 0.98.5.2
                 python: 2.5.4 (r254:67916, Mar 18 2009, 09:51:51)  [GCC
                         4.0.1 (Apple Inc. build 5490)]
               platform: darwin

REQUIRED DEPENDENCIES
                  numpy: 1.4.0.dev6729
              freetype2: 9.19.3

OPTIONAL BACKEND DEPENDENCIES
                 libpng: 1.2.33
                Tkinter: Tkinter: 67737, Tk: 8.4, Tcl: 8.4
               wxPython: no
                         * wxPython not found
Xlib:  extension "Generic Event Extension" missing on display "/tmp/ 
launch-EgEkbJ/:0".
Xlib:  extension "Generic Event Extension" missing on display "/tmp/ 
launch-EgEkbJ/:0".
Xlib:  extension "Generic Event Extension" missing on display "/tmp/ 
launch-EgEkbJ/:0".
                   Gtk+: gtk+: 2.14.7, glib: 2.18.4, pygtk: 2.12.1,
                         pygobject: 2.15.4
        Mac OS X native: yes
                     Qt: Qt: 3.3.8, PyQt: 3.17.5
                    Qt4: Qt: 4.4.1, PyQt4: 4.4.4
                  Cairo: 1.8.2

OPTIONAL DATE/TIMEZONE DEPENDENCIES
               datetime: present, version unknown
               dateutil: matplotlib will provide
                   pytz: 2008c

OPTIONAL USETEX DEPENDENCIES
                 dvipng: 1.5
            ghostscript: 8.61
                  latex: 3.141592


-gideon

Hi,

I'm using the code copied straight from the simple tkagg animation example at:

http://matplotlib.sourceforge.net/examples/animation/simple_anim_tkagg.html

It starts up fine and I can see the moving sine wave, however, after about 15 to 20 seconds the plotting window freezes showing "Figure 1 (Not Responding)" and that's that. Adding an additional line, "print i" just before "line.set_ydata(...)" shows that even once the window has frozen the code is still being executed.  Has anyone had this problem and solved it?

I'm on Windows Vista running:
Python 2.5.1 (r251:54863, Apr 18 2007, 08:51:08) [MSC v.1310 32 bit (Intel)] on win32
Matplotlib v0.98.3

numpy v1.2.0
Tkinter $Revision: 50704 $

Thanks

Am Freitag, den 27.03.2009, 07:58 -0500 schrieb John Hunter:
> 
> 
> On Fri, Mar 27, 2009 at 5:00 AM, marcusantonius
> <mar...@st...> wrote:
>         
>         Hi,
>         
>         I have a problem when saving my plot as a png. The horizontal
>         lines, which I
>         inserted via
>         axhline(y=0.136, xmin=0., xmax=1, color='black',ls=':')
>         axhline(y=0.094, xmin=0., xmax=1, color='black',ls=':')
>         are not displayed right in the png file. Saving in pdf works
>         perfectly. I
>         enclosed the two files in this email.
>         http://www.nabble.com/file/p22738740/p25.pdf p25.pdf
>         http://www.nabble.com/file/p22738740/p25.png p25.png
>         
>         Is there a way to fix this problem?
> 
> 
> This appears to be working fine for me with svn matplotlib -- what
> version are you using?  See also:
> http://matplotlib.sourceforge.net/faq/troubleshooting_faq.html#report-a-problem for information about how to obtain version and other configuration information.
>  

I am using 0.98.3-3, which is in the Ubuntu packages.

Cheers,
Markus

On Sat, Mar 28, 2009 at 15:45, Bala subramanian
<bal...@gm...> wrote:
> Friends,
> In the following. I am not able to understand how this plot.show() works. I
> have commented the problem in the following examples.

You have to call plt.show() only when you want to actually show the
figure. That's because you're using python command interpreter.

Try:

plt.plot(x,y,'b-')
plt.ylim( (1.5,4.5) )
plt.show()

If you want to do interactive plotting, I suggest using ipython.

ipython -pylab

already import the pylab module, that provide all the pyplot functions.

I prefer to do something like

$ipython

  import matplotlib.pyplot as plt
  plt.ion() # incase it's not already in interactive mode
  <do my printing>

This way, it will open the figure window and you'll be able to
"decorate" the plot in the ipython shell and see the result applied to
the "background" figure with no need to execute "plt.show()" or close
the windows between a command and a "show()".

Regards,
-- 
Sandro Tosi (aka morph, morpheus, matrixhasu)
My website: http://matrixhasu.altervista.org/
Me at Debian: http://wiki.debian.org/SandroTosi

Friends,
In the following. I am not able to understand how this plot.show() works. I
have commented the problem in the following examples.

>>> plt.plot(x,y,'b-')
[<matplotlib.lines.Line2D object at 0x9e50ecc>]
>>> plt.show()   *# shows the plot of x Vs y*

>>> plt.ylim( (1.5,4.5) )
(1.5, 4.5)
>>> plt.show()       *# Does nt show the plot*

>>> plt.ylim( ymin=1.5,ymax=4.5 )
(1.5, 4.5)
>>> plt.show()   *# Does nt show the plot*

Thanks,
Bala

Friends,

Kindly give me some tips on how to import data from a data file to make the
plot.

Thanks,
Bala

> Hello,
>
> I have a demo application integrating a dynamic mpl plot into a PyQt GUI.
> The plot is dynamic in the sense that the user can manipulate it through the
> use of the GUI's (PyQt) widgets and controls. The code is in:
> http://eli.thegreenplace.net/files/prog_code/qt_mpl_bars.py.txt
>
> Now, I have a slight problem. When the plot is zoomed with the toolbar's
> standard "zoom to rectangle" tool, and then the window is switched in an out
> of focus, the zoom level disappears and the plot comes bac k to "home" mode. 
>
> How can I make it persist? Can I somehow query the zoom state of the plot
> and restore it?
>
> Thanks
> Eli
>   
Ok so at least you can reproduce with bug ;)
Maybe we should ask matplolib to render into a buffer widget...but I not
sure.
However, I'm pretty sure we should not call matplotlib on every draw event.

Any ideas??

Xavier

Le vendredi 27 mars 2009 à 18:15 +0100, Bala subramanian a écrit :
> I have to make multiple plot on the same page. Six row and three
> column. Kindly suggest me some tips to do the same.

I suggest you to have a look to the matplotlib gallery, in particular
this example 
http://matplotlib.sourceforge.net/examples/pylab_examples/psd_demo2.html

You need to define subplots using the pyplot interface
http://matplotlib.sourceforge.net/api/pyplot_api.html?#matplotlib.pyplot.subplot
or the matplotlib API 
http://matplotlib.sourceforge.net/api/axes_api.html?#matplotlib.axes.Subplot

With many subplots, you may pay attention with the figure size, that you
can define with the 'figsize' and 'dpi' keyword arguments of the figure
function :
http://matplotlib.sourceforge.net/api/pyplot_api.html?#matplotlib.pyplot.figure

-- 
Fabrice Silva <si...@lm...>
LMA UPR CNRS 7051

On Fri, Mar 27, 2009 at 12:15 PM, Bala subramanian <
bal...@gm...> wrote:

>
> I have to make multiple plot on the same page. Six row and three column.
> Kindly suggest me some tips to do the same.


This is covered in the tutorial I referred you to in my first response,

  http://matplotlib.sourceforge.net/users/pyplot_tutorial.html

specifically the section "Working with multiple figures and axes"


http://matplotlib.sourceforge.net/users/pyplot_tutorial.html#working-with-multiple-figures-and-axes

To make six rows and three columns, you do

  subplot(6,3,1)
  subplot(6,3,2)
  ...
  subplot(6,3,18)

See also the documentation for the subplot command


http://matplotlib.sourceforge.net/api/pyplot_api.html#matplotlib.pyplot.subplot

JDH