User profiles for author:"Yang Stephanie" OR author:" Stephanie Yang"

Stephanie Yang

- Verified email at alumni.jh.edu - Cited by 436

Stephanie Yang

- Verified email at g.harvard.edu - Cited by 48

How can high-frequency sensors capture collaboration? A review of the empirical links between multimodal metrics and collaborative constructs

B Schneider, G Sung, E Chng, S Yang - Sensors, 2021 - mdpi.com
This paper reviews 74 empirical publications that used high-frequency data collection tools
to capture facets of small collaborative groups—ie, papers that conduct Multimodal …

Evaluation of mitochondrial DNA copy number estimation techniques

RJ Longchamps, CA Castellani, SY Yang… - PloS one, 2020 - journals.plos.org
Mitochondrial DNA copy number (mtDNA-CN), a measure of the number of mitochondrial
genomes per cell, is a minimally invasive proxy measure for mitochondrial function and has …

Blood-derived mitochondrial DNA copy number is associated with gene expression across multiple tissues and is predictive for incident neurodegenerative disease

SY Yang, CA Castellani, RJ Longchamps… - Genome …, 2021 - genome.cshlp.org
Mitochondrial DNA copy number (mtDNA-CN) is a proxy for mitochondrial function and is
associated with aging-related diseases. However, it is unclear how mtDNA-CN measured in …

Consistent RNA sequencing contamination in GTEx and other data sets

TO Nieuwenhuis, SY Yang, RX Verma… - Nature …, 2020 - nature.com
A challenge of next generation sequencing is read contamination. We use Genotype-Tissue
Expression (GTEx) datasets and technical metadata along with RNA-seq datasets from other …

Hydrogel viscoelasticity modulates migration and fusion of mesenchymal stem cell spheroids

DT Wu, M Diba, S Yang, BR Freedman… - Bioengineering & …, 2023 - Wiley Online Library
Multicellular spheroids made of stem cells can act as building blocks that fuse to capture
complex aspects of native in vivo environments, but the effect of hydrogel viscoelasticity on …

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

H Phatnani, J Kwan, D Sareen, JR Broach, Z Simmons… - Iscience, 2021 - cell.com
Neurodegenerative diseases are challenging for systems biology because of the lack of
reliable animal models or patient samples at early disease stages. Induced pluripotent stem …

New developments in the genetics of inclusion body myositis

KA Britson, SY Yang, TE Lloyd - Current rheumatology reports, 2018 - Springer
Abstract Purpose of Review Our goal is to review the recent literature pertaining to the
genetics of sporadic inclusion body myositis (IBM). Recent Findings In a study of 252 IBM …

[HTML][HTML] Direct delivery of plasmin using clot-anchoring thrombin-responsive nanoparticles for targeted fibrinolytic therapy

M Sun, MHH Pontius, S Yang, T Pendekanti… - Journal of Thrombosis …, 2023 - Elsevier
Background Fibrin-rich clot formation in thrombo-occlusive pathologies is currently treated
by systemic administration of plasminogen activators (eg tPA), to convert fibrin-associated …

Decoding Debugging Instruction: A Systematic Literature Review of Debugging Interventions

S Yang, M Baird, E O'Rourke, K Brennan… - ACM Transactions on …, 2024 - dl.acm.org
Students learning computer science frequently struggle with debugging errors in their code.
These struggles can have significant downstream effects—negatively influencing how …

Mitochondrial DNA copy number and incident atrial fibrillation

D Zhao, TM Bartz, N Sotoodehnia, WS Post… - BMC medicine, 2020 - Springer
Background Mechanistic studies suggest that mitochondria DNA (mtDNA) dysfunction may
be associated with increased risk of atrial fibrillation (AF). The association between mtDNA …