User profiles for Roberto Pagliarini
![]() | Roberto PagliariniUniversita' degli Studi di Udine Verified email at uniud.it Cited by 338 |
Dissection of metabolic reprogramming in polycystic kidney disease reveals coordinated rewiring of bioenergetic pathways
C Podrini, I Rowe, R Pagliarini, ASH Costa… - Communications …, 2018 - nature.com
Autosomal Dominant Polycystic Kidney Disease (ADPKD) is a genetic disorder caused by
loss-of-function mutations in PKD1 or PKD2. Increased glycolysis is a prominent feature of the …
loss-of-function mutations in PKD1 or PKD2. Increased glycolysis is a prominent feature of the …
Primary cilia sense glutamine availability and respond via asparagine synthetase
ME Steidl, EA Nigro, AK Nielsen, R Pagliarini… - Nature …, 2023 - nature.com
Depriving cells of nutrients triggers an energetic crisis, which is resolved by metabolic rewiring
and organelle reorganization. Primary cilia are microtubule-based organelles at the cell …
and organelle reorganization. Primary cilia are microtubule-based organelles at the cell …
mTORC1 upregulation leads to accumulation of the oncometabolite fumarate in a mouse model of renal cell carcinoma
L Drusian, EA Nigro, V Mannella, R Pagliarini, M Pema… - Cell reports, 2018 - cell.com
Renal cell carcinomas (RCCs) are common cancers diagnosed in more than 350,000 people
each year worldwide. Several pathways are de-regulated in RCCs, including mTORC1. …
each year worldwide. Several pathways are de-regulated in RCCs, including mTORC1. …
In silico modeling of liver metabolism in a human disease reveals a key enzyme for histidine and histamine homeostasis
R Pagliarini, R Castello, F Napolitano, R Borzone… - Cell reports, 2016 - cell.com
Primary hyperoxaluria type I (PH1) is an autosomal-recessive inborn error of liver metabolism
caused by alanine:glyoxylate aminotransferase (AGT) deficiency. In silico modeling of liver …
caused by alanine:glyoxylate aminotransferase (AGT) deficiency. In silico modeling of liver …
MP modelling of glucose-insulin interactions in the intravenous glucose tolerance test
V Manca, L Marchetti, R Pagliarini - Natural Computing for …, 2014 - igi-global.com
The Intravenous Glucose Tolerance Test is an experimental procedure used to study the
glucose-insulin endocrine regulatory system. An open problem is to construct a model …
glucose-insulin endocrine regulatory system. An open problem is to construct a model …
A genome-scale modeling approach to study inborn errors of liver metabolism: toward an in silico patient
R Pagliarini, D di Bernardo - Journal of Computational Biology, 2013 - liebertpub.com
Inborn errors of metabolism (IEM) are genetic diseases caused by mutations in enzymes or
transporters affecting specific metabolic reactions that cause a block in the physiological …
transporters affecting specific metabolic reactions that cause a block in the physiological …
A photosynthetic process modelled by a metabolic P system
V Manca, R Pagliarini, S Zorzan - Natural Computing, 2009 - Springer
Photosynthesis is the process used by plants, algae and some bacteria to obtain biochemical
energy from sunlight. It is the most important process allowing life on earth. In this work, by …
energy from sunlight. It is the most important process allowing life on earth. In this work, by …
Data analysis pipeline from laboratory to MP models
A workflow for data analysis is introduced to synthesize flux regulation maps of a Metabolic
P system from time series of data observed in laboratory. The procedure is successfully …
P system from time series of data observed in laboratory. The procedure is successfully …
Metabolic P systems: A discrete model for biological dynamics
…, G Franco, L Marchetti, R Pagliarini - Chinese Journal of …, 2013 - ieeexplore.ieee.org
A recent methodology to model biochemical systems is here presented. It is based on a
conceptual framework rooted in membrane computing and developed with concepts typical of …
conceptual framework rooted in membrane computing and developed with concepts typical of …
Metabolic reprogramming and reconstruction: Integration of experimental and computational studies to set the path forward in ADPKD
R Pagliarini, C Podrini - Frontiers in Medicine, 2021 - frontiersin.org
Metabolic reprogramming is a key feature of Autosomal Dominant Polycystic Kidney Disease
(ADPKD) characterized by changes in cellular pathways occurring in response to the …
(ADPKD) characterized by changes in cellular pathways occurring in response to the …