[HTML][HTML] Hematopoietic cell types: prototype for a revised cell ontology
… In the first stage, which is now complete, we revised … the ontology for the hematopoietic
cells, we have eliminated the multiple inheritance via the artifactual high-level terms such as “cell …
cells, we have eliminated the multiple inheritance via the artifactual high-level terms such as “cell …
Hematopoietic Cell Types: Prototype for a Revised Cell Ontology
A Diehl - Nature Precedings, 2009 - nature.com
… cell cultures, although the Cell Ontology may be used to describe the resulting cells if they
correspond to an in vivo cell type… workshop on immune cell types within a modified CL and …
correspond to an in vivo cell type… workshop on immune cell types within a modified CL and …
Hematopoietic Cell Types: Prototype for a Revised Cell Ontology
… in certain areas of the ontology, and hematopoietic cell types in particular have been …
revisions and examine the process as an example for the future development of the Cell Ontology…
revisions and examine the process as an example for the future development of the Cell Ontology…
An ontology for representing hematologic malignancies: the cancer cell ontology
… cell types with special attention to hematopoietic cell types. [6, 7] The CL links to other
ontologies … flowCL tool, which will be modified to match cell types to corresponding entities in the …
ontologies … flowCL tool, which will be modified to match cell types to corresponding entities in the …
Logical development of the cell ontology
… We have revised and extended the hematopoietic cell branch of the CL following a normalized
approach in which computable definitions (sometimes called "logical definitions" or "cross…
approach in which computable definitions (sometimes called "logical definitions" or "cross…
Towards a pragmatic definition of cell type
… here that a cell type should represent any class of cell that (1) is … four classes of cell types:
sensu stricto cell types, archetypes, … that go into a cell type definition using ontologies, we can …
sensu stricto cell types, archetypes, … that go into a cell type definition using ontologies, we can …
An improved ontological representation of dendritic cells as a paradigm for all cell types
… All other lineage relationships, such as that between hematopoietic stem cells and common
… and to use a reasoner to assess consequences of the revision on the DC-CL hierarchy. Thus…
… and to use a reasoner to assess consequences of the revision on the DC-CL hierarchy. Thus…
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability
… Since its inception in 2005, the CL has undergone multiple rounds of revision and … of
hematopoietic cells in the ontology [2–4]. Originally, the CL was designed to include cell types from …
hematopoietic cells in the ontology [2–4]. Originally, the CL was designed to include cell types from …
Cell type discovery and representation in the era of high-content single cell phenotyping
… reference for cell type representation, the Cell Ontology has … new paradigm for a
comprehensive revision of the entire CL. … of well-defined hematopoietic cell populations by the …
comprehensive revision of the entire CL. … of well-defined hematopoietic cell populations by the …
Ontology based molecular signatures for immune cell types via gene expression analysis
… Class II components in the myeloid branch of hematopoietic cells. Literature review confirms
this role of B … The continuously updated source file for the CL ontology can be found at the …
this role of B … The continuously updated source file for the CL ontology can be found at the …