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Description
Pandas version checks
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I have checked that this issue has not already been reported.
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I have confirmed this bug exists on the latest version of pandas.
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I have confirmed this bug exists on the main branch of pandas.
Reproducible Example
>>> import pandas as pd
>>> df1 = pd.DataFrame({"a": range(2), "b": range(2)}, dtype="datetime64[s]")
>>> df2 = pd.DataFrame({"a": range(2), "b": range(2)}, dtype="datetime64[ns]")
>>> pd.concat([df1, df2])
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "D:\Academic\Open Source\pandas-yxiao\pandas\core\reshape\concat.py", line 390, in concat
return op.get_result()
File "D:\Academic\Open Source\pandas-yxiao\pandas\core\reshape\concat.py", line 678, in get_result
new_data = concatenate_managers(
File "D:\Academic\Open Source\pandas-yxiao\pandas\core\internals\concat.py", line 198, in concatenate_managers
return BlockManager(tuple(blocks), axes)
File "D:\Academic\Open Source\pandas-yxiao\pandas\core\internals\managers.py", line 988, in __init__
self._verify_integrity()
File "D:\Academic\Open Source\pandas-yxiao\pandas\core\internals\managers.py", line 995, in _verify_integrity
raise_construction_error(tot_items, block.shape[1:], self.axes)
File "D:\Academic\Open Source\pandas-yxiao\pandas\core\internals\managers.py", line 2218, in raise_construction_error
raise ValueError(f"Shape of passed values is {passed}, indices imply {implied}")
ValueError: Shape of passed values is (2, 2), indices imply (4, 2)
Issue Description
Note that this bug does not exist on the latest version of pandas (v2.0.2). I think axis
may have been messed up somewhere, will investigate.
Expected Behavior
>>> import pandas as pd
>>> df1 = pd.DataFrame({"a": range(2), "b": range(2)}, dtype="datetime64[s]")
>>> df2 = pd.DataFrame({"a": range(2), "b": range(2)}, dtype="datetime64[ns]")
>>> pd.concat([df1, df2])
a b
0 1970-01-01 00:00:00 1970-01-01 00:00:00
1 1970-01-01 00:00:01 1970-01-01 00:00:01
0 1970-01-01 00:00:00 1970-01-01 00:00:00
1 1970-01-01 00:00:00.001000 1970-01-01 00:00:00.001000
Installed Versions
INSTALLED VERSIONS
------------------
commit : 4149f323882a55a2fe57415ccc190ea2aaba869b
python : 3.9.6.final.0
python-bits : 64
OS : Windows
OS-release : 10
Version : 10.0.22621
machine : AMD64
processor : Intel64 Family 6 Model 158 Stepping 10, GenuineIntel
byteorder : little
LC_ALL : None
LANG : en_US.UTF-8
LOCALE : Chinese (Simplified)_China.936
pandas : 2.1.0.dev0+956.g4149f32388
numpy : 1.24.3
pytz : 2023.3
dateutil : 2.8.2
setuptools : 56.0.0
pip : 23.1.2
Cython : 0.29.33
pytest : 7.3.1
hypothesis : 6.75.9
sphinx : 6.2.1
blosc : 1.11.1
feather : None
xlsxwriter : 3.1.2
lxml.etree : 4.9.2
html5lib : 1.1
pymysql : 1.0.3
psycopg2 : 2.9.6
jinja2 : 3.1.2
IPython : 8.14.0
pandas_datareader: None
bs4 : 4.12.2
bottleneck : 1.3.7
brotli :
fastparquet : 2023.4.0
fsspec : 2023.5.0
gcsfs : 2023.5.0
matplotlib : 3.7.1
numba : 0.57.0
numexpr : 2.8.4
odfpy : None
openpyxl : 3.1.2
pandas_gbq : None
pyarrow : 12.0.0
pyreadstat : 1.2.2
pyxlsb : 1.0.10
s3fs : 2023.5.0
scipy : 1.10.1
snappy :
sqlalchemy : 2.0.15
tables : 3.8.0
tabulate : 0.9.0
xarray : 2023.5.0
xlrd : 2.0.1
zstandard : 0.21.0
tzdata : 2023.3
qtpy : None
pyqt5 : None