Include .c files in repo.

[twiecki]

pip install git+https://github.com/pydata/pandas.git

does currently not work because the .pyx files are not being cythonized (not sure why). An easy fix is to include .c files in the git repo which should make it easier for people to deploy.

I used a simple try: import cython in setup.py that cythonizes if cython is installed and uses the .c files otherwise:

https://github.com/hddm-devs/hddm/blob/develop/setup.py#L4

[wesm]

I don't want to include the .c files in the repo because of the diff noise. @minrk do you know what could be wrong?

[minrk]

I might. @twiecki - do you have vanilla setuptools or distribute?

I encountered this or similar in pyzmq, where old-style setuptools will actually explicitly convert all your .pyx extensions back to .c if pyrex is not importable. my workaround. distribute doesn't have this problem.

I can confirm on my system that a virtualenv created with setuptools cannot run the install above, but one with distribute instead can, so it's probably the same issue.

[twiecki]

@minrk Yes, it's in a virtualenv. Not sure what it was created with (used virtualenvwrapper), it might have both actually.

[minrk]

Try this, then:

pip install git+https://github.com/minrk/pandas.git@badsetuptools

[minrk]

(if it works, I'll do a PR)

[twiecki]

@minrk: yes, that did the trick

cythoning pandas/src/generated.pyx to pandas/src/generated.c

Thanks!

On Thu, Aug 23, 2012 at 2:34 PM, Min RK notifications@github.com wrote:

(if it works, I'll do a PR)

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Reply to this email directly or view it on GitHubhttps://github.com//issues/1805#issuecomment-7979354.

[minrk]

See #1806