#!/usr/bin/env python """ Parts of this file were taken from the pyzmq project (https://github.com/zeromq/pyzmq) which have been permitted for use under the BSD license. Parts are from lxml (https://github.com/lxml/lxml) """ import os import sys import shutil import warnings import re # may need to work around setuptools bug by providing a fake Pyrex try: import Cython sys.path.insert(0, os.path.join(os.path.dirname(__file__), "fake_pyrex")) except ImportError: pass # try bootstrapping setuptools if it doesn't exist try: import pkg_resources try: pkg_resources.require("setuptools>=0.6c5") except pkg_resources.VersionConflict: from ez_setup import use_setuptools use_setuptools(version="0.6c5") from setuptools import setup, Command _have_setuptools = True except ImportError: # no setuptools installed from distutils.core import setup, Command _have_setuptools = False setuptools_kwargs = {} min_numpy_ver = '1.7.0' if sys.version_info[0] >= 3: setuptools_kwargs = { 'zip_safe': False, 'install_requires': ['python-dateutil >= 2', 'pytz >= 2011k', 'numpy >= %s' % min_numpy_ver], 'setup_requires': ['numpy >= %s' % min_numpy_ver], } if not _have_setuptools: sys.exit("need setuptools/distribute for Py3k" "\n$ pip install distribute") else: setuptools_kwargs = { 'install_requires': ['python-dateutil', 'pytz >= 2011k', 'numpy >= %s' % min_numpy_ver], 'setup_requires': ['numpy >= %s' % min_numpy_ver], 'zip_safe': False, } if not _have_setuptools: try: import numpy import dateutil setuptools_kwargs = {} except ImportError: sys.exit("install requires: 'python-dateutil < 2','numpy'." " use pip or easy_install." "\n $ pip install 'python-dateutil < 2' 'numpy'") from distutils.extension import Extension from distutils.command.build import build from distutils.command.sdist import sdist from distutils.command.build_ext import build_ext as _build_ext try: from Cython.Distutils import build_ext as _build_ext # from Cython.Distutils import Extension # to get pyrex debugging symbols cython = True except ImportError: cython = False from os.path import join as pjoin class build_ext(_build_ext): def build_extensions(self): numpy_incl = pkg_resources.resource_filename('numpy', 'core/include') for ext in self.extensions: if hasattr(ext, 'include_dirs') and not numpy_incl in ext.include_dirs: ext.include_dirs.append(numpy_incl) _build_ext.build_extensions(self) DESCRIPTION = ("Powerful data structures for data analysis, time series," "and statistics") LONG_DESCRIPTION = """ **pandas** is a Python package providing fast, flexible, and expressive data structures designed to make working with structured (tabular, multidimensional, potentially heterogeneous) and time series data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, **real world** data analysis in Python. Additionally, it has the broader goal of becoming **the most powerful and flexible open source data analysis / manipulation tool available in any language**. It is already well on its way toward this goal. pandas is well suited for many different kinds of data: - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure The two primary data structures of pandas, Series (1-dimensional) and DataFrame (2-dimensional), handle the vast majority of typical use cases in finance, statistics, social science, and many areas of engineering. For R users, DataFrame provides everything that R's ``data.frame`` provides and much more. pandas is built on top of `NumPy `__ and is intended to integrate well within a scientific computing environment with many other 3rd party libraries. Here are just a few of the things that pandas does well: - Easy handling of **missing data** (represented as NaN) in floating point as well as non-floating point data - Size mutability: columns can be **inserted and deleted** from DataFrame and higher dimensional objects - Automatic and explicit **data alignment**: objects can be explicitly aligned to a set of labels, or the user can simply ignore the labels and let `Series`, `DataFrame`, etc. automatically align the data for you in computations - Powerful, flexible **group by** functionality to perform split-apply-combine operations on data sets, for both aggregating and transforming data - Make it **easy to convert** ragged, differently-indexed data in other Python and NumPy data structures into DataFrame objects - Intelligent label-based **slicing**, **fancy indexing**, and **subsetting** of large data sets - Intuitive **merging** and **joining** data sets - Flexible **reshaping** and pivoting of data sets - **Hierarchical** labeling of axes (possible to have multiple labels per tick) - Robust IO tools for loading data from **flat files** (CSV and delimited), Excel files, databases, and saving / loading data from the ultrafast **HDF5 format** - **Time series**-specific functionality: date range generation and frequency conversion, moving window statistics, moving window linear regressions, date shifting and lagging, etc. Many of these principles are here to address the shortcomings frequently experienced using other languages / scientific research environments. For data scientists, working with data is typically divided into multiple stages: munging and cleaning data, analyzing / modeling it, then organizing the results of the analysis into a form suitable for plotting or tabular display. pandas is the ideal tool for all of these tasks. Note ---- Windows binaries built against NumPy 1.8.1 """ DISTNAME = 'pandas' LICENSE = 'BSD' AUTHOR = "The PyData Development Team" EMAIL = "pydata@googlegroups.com" URL = "http://pandas.pydata.org" DOWNLOAD_URL = '' CLASSIFIERS = [ 'Development Status :: 4 - Beta', 'Environment :: Console', 'Operating System :: OS Independent', 'Intended Audience :: Science/Research', 'Programming Language :: Python', 'Programming Language :: Python :: 2', 'Programming Language :: Python :: 3', 'Programming Language :: Python :: 2.6', 'Programming Language :: Python :: 2.7', 'Programming Language :: Python :: 3.2', 'Programming Language :: Python :: 3.3', 'Programming Language :: Python :: 3.4', 'Programming Language :: Cython', 'Topic :: Scientific/Engineering', ] MAJOR = 0 MINOR = 14 MICRO = 1 ISRELEASED = False VERSION = '%d.%d.%d' % (MAJOR, MINOR, MICRO) QUALIFIER = '' FULLVERSION = VERSION write_version = True if not ISRELEASED: import subprocess FULLVERSION += '.dev' pipe = None for cmd in ['git','git.cmd']: try: pipe = subprocess.Popen([cmd, "describe", "--always", "--match", "v[0-9]*"], stdout=subprocess.PIPE) (so,serr) = pipe.communicate() if pipe.returncode == 0: break except: pass if pipe is None or pipe.returncode != 0: # no git, or not in git dir if os.path.exists('pandas/version.py'): warnings.warn("WARNING: Couldn't get git revision, using existing pandas/version.py") write_version = False else: warnings.warn("WARNING: Couldn't get git revision, using generic version string") else: # have git, in git dir, but may have used a shallow clone (travis does this) rev = so.strip() # makes distutils blow up on Python 2.7 if sys.version_info[0] >= 3: rev = rev.decode('ascii') if not rev.startswith('v') and re.match("[a-zA-Z0-9]{7,9}",rev): # partial clone, manually construct version string # this is the format before we started using git-describe # to get an ordering on dev version strings. rev ="v%s.dev-%s" % (VERSION, rev) # Strip leading v from tags format "vx.y.z" to get th version string FULLVERSION = rev.lstrip('v') else: FULLVERSION += QUALIFIER def write_version_py(filename=None): cnt = """\ version = '%s' short_version = '%s' """ if not filename: filename = os.path.join( os.path.dirname(__file__), 'pandas', 'version.py') a = open(filename, 'w') try: a.write(cnt % (FULLVERSION, VERSION)) finally: a.close() if write_version: write_version_py() class CleanCommand(Command): """Custom distutils command to clean the .so and .pyc files.""" user_options = [("all", "a", "")] def initialize_options(self): self.all = True self._clean_me = [] self._clean_trees = [] self._clean_exclude = ['np_datetime.c', 'np_datetime_strings.c', 'period.c', 'tokenizer.c', 'io.c', 'ujson.c', 'objToJSON.c', 'JSONtoObj.c', 'ultrajsonenc.c', 'ultrajsondec.c', ] for root, dirs, files in os.walk('pandas'): for f in files: if f in self._clean_exclude: continue # XXX if 'ujson' in f: continue if os.path.splitext(f)[-1] in ('.pyc', '.so', '.o', '.pyo', '.pyd', '.c', '.orig'): self._clean_me.append(pjoin(root, f)) for d in dirs: if d == '__pycache__': self._clean_trees.append(pjoin(root, d)) for d in ('build', 'dist'): if os.path.exists(d): self._clean_trees.append(d) def finalize_options(self): pass def run(self): for clean_me in self._clean_me: try: os.unlink(clean_me) except Exception: pass for clean_tree in self._clean_trees: try: shutil.rmtree(clean_tree) except Exception: pass class CheckSDist(sdist): """Custom sdist that ensures Cython has compiled all pyx files to c.""" _pyxfiles = ['pandas/lib.pyx', 'pandas/hashtable.pyx', 'pandas/tslib.pyx', 'pandas/index.pyx', 'pandas/algos.pyx', 'pandas/parser.pyx', 'pandas/src/sparse.pyx', 'pandas/src/testing.pyx'] def initialize_options(self): sdist.initialize_options(self) ''' self._pyxfiles = [] for root, dirs, files in os.walk('pandas'): for f in files: if f.endswith('.pyx'): self._pyxfiles.append(pjoin(root, f)) ''' def run(self): if 'cython' in cmdclass: self.run_command('cython') else: for pyxfile in self._pyxfiles: cfile = pyxfile[:-3] + 'c' msg = "C-source file '%s' not found." % (cfile) +\ " Run 'setup.py cython' before sdist." assert os.path.isfile(cfile), msg sdist.run(self) class CheckingBuildExt(build_ext): """Subclass build_ext to get clearer report if Cython is necessary.""" def check_cython_extensions(self, extensions): for ext in extensions: for src in ext.sources: if not os.path.exists(src): raise Exception("""Cython-generated file '%s' not found. Cython is required to compile pandas from a development branch. Please install Cython or download a release package of pandas. """ % src) def build_extensions(self): self.check_cython_extensions(self.extensions) build_ext.build_extensions(self) class CythonCommand(build_ext): """Custom distutils command subclassed from Cython.Distutils.build_ext to compile pyx->c, and stop there. All this does is override the C-compile method build_extension() with a no-op.""" def build_extension(self, ext): pass class DummyBuildSrc(Command): """ numpy's build_src command interferes with Cython's build_ext. """ user_options = [] def initialize_options(self): self.py_modules_dict = {} def finalize_options(self): pass def run(self): pass cmdclass = {'clean': CleanCommand, 'build': build, 'sdist': CheckSDist} if cython: suffix = '.pyx' cmdclass['build_ext'] = CheckingBuildExt cmdclass['cython'] = CythonCommand else: suffix = '.c' cmdclass['build_src'] = DummyBuildSrc cmdclass['build_ext'] = CheckingBuildExt lib_depends = ['reduce', 'inference', 'properties'] def srcpath(name=None, suffix='.pyx', subdir='src'): return pjoin('pandas', subdir, name + suffix) if suffix == '.pyx': lib_depends = [srcpath(f, suffix='.pyx') for f in lib_depends] lib_depends.append('pandas/src/util.pxd') else: lib_depends = [] plib_depends = [] common_include = ['pandas/src/klib', 'pandas/src'] def pxd(name): return os.path.abspath(pjoin('pandas', name + '.pxd')) lib_depends = lib_depends + ['pandas/src/numpy_helper.h', 'pandas/src/parse_helper.h'] tseries_depends = ['pandas/src/datetime/np_datetime.h', 'pandas/src/datetime/np_datetime_strings.h', 'pandas/src/period.h'] # some linux distros require it libraries = ['m'] if 'win32' not in sys.platform else [] ext_data = dict( lib={'pyxfile': 'lib', 'pxdfiles': [], 'depends': lib_depends}, hashtable={'pyxfile': 'hashtable', 'pxdfiles': ['hashtable']}, tslib={'pyxfile': 'tslib', 'depends': tseries_depends, 'sources': ['pandas/src/datetime/np_datetime.c', 'pandas/src/datetime/np_datetime_strings.c', 'pandas/src/period.c']}, index={'pyxfile': 'index', 'sources': ['pandas/src/datetime/np_datetime.c', 'pandas/src/datetime/np_datetime_strings.c']}, algos={'pyxfile': 'algos', 'depends': [srcpath('generated', suffix='.pyx'), srcpath('join', suffix='.pyx')]}, parser=dict(pyxfile='parser', depends=['pandas/src/parser/tokenizer.h', 'pandas/src/parser/io.h', 'pandas/src/numpy_helper.h'], sources=['pandas/src/parser/tokenizer.c', 'pandas/src/parser/io.c']) ) extensions = [] for name, data in ext_data.items(): sources = [srcpath(data['pyxfile'], suffix=suffix, subdir='')] pxds = [pxd(x) for x in data.get('pxdfiles', [])] if suffix == '.pyx' and pxds: sources.extend(pxds) sources.extend(data.get('sources', [])) include = data.get('include', common_include) obj = Extension('pandas.%s' % name, sources=sources, depends=data.get('depends', []), include_dirs=include) extensions.append(obj) sparse_ext = Extension('pandas._sparse', sources=[srcpath('sparse', suffix=suffix)], include_dirs=[], libraries=libraries) extensions.extend([sparse_ext]) testing_ext = Extension('pandas._testing', sources=[srcpath('testing', suffix=suffix)], include_dirs=[], libraries=libraries) extensions.extend([testing_ext]) #---------------------------------------------------------------------- # msgpack stuff here if sys.byteorder == 'big': macros = [('__BIG_ENDIAN__', '1')] else: macros = [('__LITTLE_ENDIAN__', '1')] msgpack_ext = Extension('pandas.msgpack', sources = [srcpath('msgpack', suffix=suffix if suffix == '.pyx' else '.cpp', subdir='')], language='c++', include_dirs=common_include, define_macros=macros) extensions.append(msgpack_ext) # if not ISRELEASED: # extensions.extend([sandbox_ext]) if suffix == '.pyx' and 'setuptools' in sys.modules: # undo dumb setuptools bug clobbering .pyx sources back to .c for ext in extensions: if ext.sources[0].endswith(('.c','.cpp')): root, _ = os.path.splitext(ext.sources[0]) ext.sources[0] = root + suffix ujson_ext = Extension('pandas.json', depends=['pandas/src/ujson/lib/ultrajson.h', 'pandas/src/numpy_helper.h'], sources=['pandas/src/ujson/python/ujson.c', 'pandas/src/ujson/python/objToJSON.c', 'pandas/src/ujson/python/JSONtoObj.c', 'pandas/src/ujson/lib/ultrajsonenc.c', 'pandas/src/ujson/lib/ultrajsondec.c', 'pandas/src/datetime/np_datetime.c', 'pandas/src/datetime/np_datetime_strings.c'], include_dirs=['pandas/src/ujson/python', 'pandas/src/ujson/lib', 'pandas/src/datetime'] + common_include, extra_compile_args=['-D_GNU_SOURCE']) extensions.append(ujson_ext) if _have_setuptools: setuptools_kwargs["test_suite"] = "nose.collector" # The build cache system does string matching below this point. # if you change something, be careful. setup(name=DISTNAME, version=FULLVERSION, maintainer=AUTHOR, packages=['pandas', 'pandas.compat', 'pandas.computation', 'pandas.computation.tests', 'pandas.core', 'pandas.io', 'pandas.rpy', 'pandas.sandbox', 'pandas.sparse', 'pandas.sparse.tests', 'pandas.stats', 'pandas.util', 'pandas.tests', 'pandas.tests.test_msgpack', 'pandas.tools', 'pandas.tools.tests', 'pandas.tseries', 'pandas.tseries.tests', 'pandas.io.tests', 'pandas.io.tests.test_json', 'pandas.stats.tests', ], package_data={'pandas.io': ['tests/data/legacy_hdf/*.h5', 'tests/data/legacy_pickle/0.10.1/*.pickle', 'tests/data/legacy_pickle/0.11.0/*.pickle', 'tests/data/legacy_pickle/0.12.0/*.pickle', 'tests/data/legacy_pickle/0.13.0/*.pickle', 'tests/data/legacy_pickle/0.14.0/*.pickle', 'tests/data/*.csv', 'tests/data/*.dta', 'tests/data/*.txt', 'tests/data/*.xls', 'tests/data/*.xlsx', 'tests/data/*.xlsm', 'tests/data/*.table', 'tests/data/*.html', 'tests/data/html_encoding/*.html', 'tests/test_json/data/*.json'], 'pandas.tools': ['tests/*.csv'], 'pandas.tests': ['data/*.pickle', 'data/*.csv'], 'pandas.tseries.tests': ['data/*.pickle', 'data/*.csv'] }, ext_modules=extensions, maintainer_email=EMAIL, description=DESCRIPTION, license=LICENSE, cmdclass=cmdclass, url=URL, download_url=DOWNLOAD_URL, long_description=LONG_DESCRIPTION, classifiers=CLASSIFIERS, platforms='any', **setuptools_kwargs)