First Molecular Detection and Genetic Characterization of Tetratrichomonas buttreyi and Pentatrichomonas hominis in Donkeys in Shanxi Province, China
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Sampling Collection
2.2. DNA Extraction and PCR Amplification
2.3. Sequencing and Phylogenetic Analysis
2.4. Statistical Analysis
3. Results
3.1. Prevalence of T. buttreyi and P. hominis in Donkeys
3.2. Sequence Analysis of T. buttreyi and P. hominis
3.3. Phylogenetic Analysis of T. buttreyi and P. hominis
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Species | Gene | Primer ID | Primer Sequences (5′-3′) | Annealing Temperatures (°C) | Fragment Length (bp) |
---|---|---|---|---|---|
T. buttreyi | SSU rRNA | FF | GCGCCTGAGAGATAGCGACTA | 59 | |
RR | GGACCTGTTATTGCTACCCTCTTC | ||||
bF | GTTTTTTCTCAGGCAGCAATG | 61 | 623 | ||
bR | GCAACCTAGAAACCTAGGCG | ||||
P. hominis | SSU rRNA | F1 | ATGGCGAGTGGTGGAATA | 60 | |
R1 | CCCAACTACGCTAAGGATT | ||||
F2 | TGTAAACGATGCCGACAGAG | 60 | 339 | ||
R2 | CAACACTGAAGCCAATGCGAGC |
Species | Factor | Category | No. Positive/No. Tested | Prevalence % (95% CI) | OR (95% CI) | p-Value |
---|---|---|---|---|---|---|
T. buttreyi | Region | Jinzhong | 16/81 | 19.8 (11.1–28.4) | Ref. | <0.001 |
Linfen | 115/363 | 31.7 (26.9–36.5) | 1.9 (1.0–3.4) | |||
Datong | 76/371 | 20.5 (16.4–24.6) | 1.1 (0.6–1.9) | |||
Age | ≥3 years | 160/601 | 26.6 (23.1–30.2) | 1.3 (0.9–1.9) | 0.179 | |
<3 years | 47/214 | 22.0 (16.4–27.5) | Ref. | |||
Sex | Male | 15/120 | 12.5 (6.6–18.4) | Ref. | <0.001 | |
Female | 192/695 | 27.6 (24.3–31.0) | 2.7 (1.5–4.7) | |||
Sub-total | 207/815 | 25.4 (22.4–28.4) | ||||
P. hominis | Region | Jinzhong | 0/81 | 0 | 0.428 | |
Linfen | 2/363 | 0.6 (0.0–1.3) | Ref. | |||
Datong | 4/371 | 1.1 (0.0–2.1) | 2.0 (0.4–10.8) | |||
Age | ≥3 years | 2/601 | 0.3 (0.0–0.8) | Ref. | 0.024 | |
<3 years | 4/214 | 1.9 (0.1–3.7) | 5.7 (1.0–31.4) | |||
Sex | Male | 2/120 | 1.7 (0.0–4.0) | 2.9 (0.5–16.2) | 0.197 | |
Female | 4/695 | 0.6 (0.0–1.1) | Ref. | |||
Sub-total | 6/815 | 0.7 (0.2–1.3) |
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Xiao, H.-D.; Zhang, S.; Lv, Y.-H.; Zhang, Z.-D.; Su, N.; Li, L.-L.; Zhu, X.-Q.; Xie, S.-C.; Gao, W.-W. First Molecular Detection and Genetic Characterization of Tetratrichomonas buttreyi and Pentatrichomonas hominis in Donkeys in Shanxi Province, China. Animals 2024, 14, 2651. https://doi.org/10.3390/ani14182651
Xiao H-D, Zhang S, Lv Y-H, Zhang Z-D, Su N, Li L-L, Zhu X-Q, Xie S-C, Gao W-W. First Molecular Detection and Genetic Characterization of Tetratrichomonas buttreyi and Pentatrichomonas hominis in Donkeys in Shanxi Province, China. Animals. 2024; 14(18):2651. https://doi.org/10.3390/ani14182651
Chicago/Turabian StyleXiao, Han-Dan, Shuo Zhang, Yi-Han Lv, Ze-Dong Zhang, Nan Su, Liang-Liang Li, Xing-Quan Zhu, Shi-Chen Xie, and Wen-Wei Gao. 2024. "First Molecular Detection and Genetic Characterization of Tetratrichomonas buttreyi and Pentatrichomonas hominis in Donkeys in Shanxi Province, China" Animals 14, no. 18: 2651. https://doi.org/10.3390/ani14182651