default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDBarry Smith 0001
Person information
- affiliation: State University of New York af Buffalo, Department of Computer Science and Engineering, NY, USA
Other persons with the same name
- Barry Smith 0002
![[0000-0001-5955-8111]](https://dblp.org/img/orcid-mark.12x12.png "0000-0001-5955-8111")
(aka: Barry F. Smith) — Argonne National Laboratory, Argonne, IL, USA (and 1 more) - Barry Smith 0004 — York University, Toronto, ON, Canada
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
showing all ?? records
2020 – today
- 2024
[c115]John Beverley, Giacomo De Colle, Mark Jensen, Carter-Beau Benson, Barry Smith:
Middle architecture criteria. JOWO 2024- [c114]John Beverley, Francesco Franda, Mohammed Hedi Karray, Dan Maxwell, Carter-Beau Benson, Barry Smith:
Ontologies, arguments, and large-language models (short paper). JOWO 2024 - [c113]John Beverley, David Limbaugh, Eric Merrell, Peter Koch, Barry Smith:
Capabilities: An ontology. JOWO 2024 - [i8]John Beverley, Giacomo De Colle, Mark Jensen, Carter Benson, Barry Smith:
Middle Architecture Criteria. CoRR abs/2404.17757 (2024) - [i7]John Beverley, Peter Koch, David Limbaugh, Barry Smith:
Capabilities. CoRR abs/2405.00183 (2024) - 2023
- [j68]S. Clint Dowland, Barry Smith, Matthew Diller, Jobst Landgrebe, William R. Hogan:
Ontology of language, with applications to demographic data. Appl. Ontology 18(3): 239-262 (2023) - [c112]Peter Koch, Barry Smith:
Beyond the Goods-Service Continuum. ICBO 2023: 173-178 - [i6]Jobst Landgrebe, Barry Smith:
Why machines do not understand: A response to Søgaard. CoRR abs/2307.04766 (2023) - 2022
- [j67]Yongqun He, Hong Yu, Anthony Huffman, Asiyah Yu Lin, Darren A. Natale, John Beverley, Ling Zheng, Yehoshua Perl, Zhigang Wang, Yingtong Liu, Edison Ong, Yang Wang, Philip Huang, Long Tran, Jinyang Du, Zalan Shah, Easheta Shah, Roshan Desai, Hsin-Hui Huang, Yujia Tian, Eric Merrell, William D. Duncan, Sivaram Arabandi, Lynn M. Schriml, Jie Zheng, Anna Maria Masci, Liwei Wang, Hongfang Liu, Fatima Zohra Smaili, Robert Hoehndorf, Zoë May Pendlington, Paola Roncaglia, Xianwei Ye, Jiangan Xie, Yi-Wei Tang, Xiaolin Yang, Suyuan Peng, Luxia Zhang, Luonan Chen, Junguk Hur, Gilbert S. Omenn, Brian D. Athey, Barry Smith:
A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology. J. Biomed. Semant. 13(1): 25 (2022) - [j66]Linda Elmhadhbi, Mohamed-Hedi Karray, Bernard Archimède, J. Neil Otte, Barry Smith:
Ontology-Driven Multicriteria Decision Support for Victim Evacuation. Int. J. Inf. Technol. Decis. Mak. 21(1): 243-272 (2022) - [j65]Linda Elmhadhbi, Mohamed-Hedi Karray, Bernard Archimède, J. Neil Otte, Barry Smith:
A Semantics-Based Common Operational Command System for Multiagency Disaster Response. IEEE Trans. Engineering Management 69(6): 3887-3901 (2022) - [c111]Milos Drobnjakovic, Boonserm (Serm) Kulvatunyou, Farhad Ameri, Chris Will, Barry Smith, Albert T. Jones:
The Industrial Ontologies Foundry (IOF) Core Ontology. FOMI 2022 - [c110]Barry Smith:
AlphaFold, AI and Ontologies. ICBO 2022: 1-3 - [c109]John Beverley, Yongqun He, Barry Smith, Shane Babcock, Eric Merrell, Lindsay G. Cowell, Regina Hurley, Sebastian Deusing:
Coordinating Coronavirus Research: The Virus Infectious Disease Ontology. ICBO 2022: 1-14 - [c108]Barry Smith, Peter Koch:
What is a Service? (abstract). JOWO 2022 - 2021
- [j64]Justine Flore Tchouanguem Djuedja, Mohamed-Hedi Karray, Bernard Kamsu-Foguem, Camille Magniont, F. Henry Abanda, Barry Smith:
BFO-based ontology enhancement to promote interoperability in BIM. Appl. Ontology 16(4): 453-479 (2021) - [j63]Rebecca C. Jackson, Nicolas Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg, Seth Carbon, Mélanie Courtot, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Nomi L. Harris, Melissa A. Haendel, Suzanna E. Lewis, Darren A. Natale, David Osumi-Sutherland, Alan Ruttenberg, Lynn M. Schriml, Barry Smith, Christian J. Stoeckert Jr., Nicole A. Vasilevsky, Ramona L. Walls, Jie Zheng, Christopher J. Mungall, Bjoern Peters:
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies. Database J. Biol. Databases Curation 2021 (2021) - [j62]Shane Babcock, John Beverley, Lindsay G. Cowell, Barry Smith:
The Infectious Disease Ontology in the age of COVID-19. J. Biomed. Semant. 12(1): 13 (2021) - [j61]Munira Mohd Ali, Ruoyu Yang, Binbin Zhang, Francesco Furini, Rahul Rai, J. Neil Otte, Barry Smith:
Enriching the functionally graded materials (FGM) ontology for digital manufacturing. Int. J. Prod. Res. 59(18): 5540-5557 (2021) - [j60]Linda Elmhadhbi, Mohamed-Hedi Karray, Bernard Archimède, J. Neil Otte, Barry Smith:
An Ontological Approach to Enhancing Information Sharing in Disaster Response. Inf. 12(10): 432 (2021) - [c107]Eric C. Merrell, Robert M. Kelly, David Kasmier, Barry Smith, Marc Brittain, Ronald Ankner, Evan Maki, Curtis W. Heisey, Kevin Bush:
Benefits of Realist Ontologies to Systems Engineering. JOWO 2021 - [c106]Eric C. Merrell, Olivier Massin, Barry Smith:
Common Core Conformant Definitions for an Ontology of Commercial Exchange. JOWO 2021 - [c105]David Kasmier, Eric Merrell, Robert M. Kelly, Barry Smith, Curtis W. Heisey, Donald Evan Maki, Marc Brittain, Ronald Ankner, Kevin Bush:
Ontology of Plays for Autonomous Teaming and Collaboration. ONTOBRAS 2021: 9-22 - [i5]Jobst Landgrebe, Barry Smith:
An argument for the impossibility of machine intelligence. CoRR abs/2111.07765 (2021) - 2020
- [c104]Jeremy R. Chapman, David Kasmier, David Limbaugh, Stephen R. Gagnon, John L. Crassidis, James Llinas, Barry Smith, Alexander P. Cox:
Conceptual Space Modeling for Space Event Characterization. FUSION 2020: 1-8 - [c103]Yongqun He, Hong Yu, Edison Ong, Yang Wang, Yingtong Liu, Anthony Huffman, Hsin-Hui Huang, John Beverley, Asiyah Yu Lin, William D. Duncan, Sivaram Arabandi, Jiangan Xie, Junguk Hur, Xiaolin Yang, Luonan Chen, Gilbert S. Omenn, Brian D. Athey, Barry Smith:
CIDO: The Community-Based Coronavirus Infectious Disease Ontology. ICBO/ODLS 2020: 1-10 - [c102]Asiyah Yu Lin, Stephan Gebel, Qingliang Leon Li, Sumit Madan, Johannes Darms, Evan Bolton, Barry Smith, Martin Hofmann-Apitius, Yongqun Oliver He, Alpha Tom Kodamullil:
CTO: A Community-Based Clinical Trial Ontology and Its Applications in PubChemRDF and SCAIView. ICBO/ODLS 2020: 1-12 - [c101]Mohamed-Hedi Karray, J. Neil Otte, Dimitris Kiritsis, Farhad Ameri, Boonserm Kulvatunyou, Chris Will, Rebeca Arista, Rahul Rai, Barry Smith:
The Industrial Ontologies Foundry (IOF) Perspectives. I-ESA Workshops 2020 - [i4]David Limbaugh, David Kasmier, Ronald Rudnicki, James Llinas, Barry Smith:
Ontology and Cognitive Outcomes. CoRR abs/2005.08078 (2020)
2010 – 2019
- 2019
- [j59]J. Neil Otte, Dimitris Kiritsis, Munira Mohd Ali, Ruoyu Yang, Binbin Zhang, Ron Rudnicki, Rahul Rai, Barry Smith:
An ontological approach to representing the product life cycle. Appl. Ontology 14(2): 179-197 (2019) - [j58]Yongqun He, Haihe Wang, Jie Zheng, Daniel P. Beiting, Anna Maria Masci, Hong Yu, Kaiyong Liu, Jianmin Wu, Jeffrey L. Curtis, Barry Smith, Alexander V. Alekseyenko, Jihad S. Obeid:
OHMI: the ontology of host-microbiome interactions. J. Biomed. Semant. 10(1): 25 (2019) - [j57]Munira Mohd Ali, Rahul Rai, J. Neil Otte, Barry Smith:
A product life cycle ontology for additive manufacturing. Comput. Ind. 105: 191-203 (2019) - [c100]David Kasmier, David Limbaugh, Barry Smith:
Foundation for a Realist Ontology of Cognitive Processes. ICBO 2019: 1-8 - [c99]David Limbaugh, David Kasmier, Werner Ceusters, Barry Smith:
Warranted Diagnosis. ICBO 2019: 1-10 - [c98]Eric Merrell, David Limbaugh, Alex Anderson, Barry Smith:
Mental Capabilities. ICBO 2019: 1-7 - [c97]Barry Smith:
Ontology as Product-Service System: Lessons Learned from GO, BFO and DOLCE. ICBO 2019: 1-9 - [c96]Barry Smith, Farhad Ameri, Hyunmin Cheong, Dimitris Kiritsis, Dusan Sormaz, Chris Will, J. Neil Otte:
A First-Order Logic Formalization of the Industrial Ontologies Foundry Signature Using Basic Formal Ontology. JOWO 2019 - [c95]Jonathan Vajda, Eric Merrell, Barry Smith:
Toward an Ontology of Commercial Exchange. JOWO 2019 - [i3]Jobst Landgrebe, Barry Smith:
Making AI meaningful again. CoRR abs/1901.02918 (2019) - [i2]Jobst Landgrebe, Barry Smith:
There is no general AI: Why Turing machines cannot pass the Turing test. CoRR abs/1906.05833 (2019) - 2018
- [j56]Erik Thomsen, Barry Smith:
Ontology-based fusion of sensor data and natural language. Appl. Ontology 13(4): 295-333 (2018) - [j55]Prodromos Kolyvakis, Alexandros Kalousis, Barry Smith, Dimitris Kiritsis:
Biomedical ontology alignment: an approach based on representation learning. J. Biomed. Semant. 9(1): 21:1-21:20 (2018) - [j54]Laurel Cooper, Austin Meier, Marie-Angélique Laporte, Justin Elser, Chris Mungall, Brandon T. Sinn, Dario Cavaliere, Seth Carbon, Nathan A. Dunn, Barry Smith, Botong Qu, Justin Preece, Eugene Zhang, Sinisa Todorovic, Georgios V. Gkoutos, John H. Doonan, Dennis W. Stevenson, Elizabeth Arnaud, Pankaj Jaiswal:
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics. Nucleic Acids Res. 46(Database-Issue): D1168-D1180 (2018) - [c94]Anna Maria Masci, Shannon McCall, Alessandro Racioppi, Helena Judge Ellis, Jihad S. Obeid, Barry Smith, Christian J. Stoeckert Jr., Jie Zheng:
Standardization of the Histopathology Cancer Report: An Ontological Approach. ICBO 2018 - [c93]Boonserm (Serm) Kulvatunyou, Evan Wallace, Dimitris Kiritsis, Barry Smith, Chris Will:
The Industrial Ontologies Foundry Proof-of-Concept Project. APMS (2) 2018: 402-409 - [c92]Werner Ceusters, Barry Smith:
On Defining Bruxism. MIE 2018: 551-555 - 2017
- [j53]Metin N. Gurcan, John Tomaszewski, James A. Overton, Scott Doyle, Alan Ruttenberg, Barry Smith:
Developing the Quantitative Histopathology Image Ontology (QHIO): A case study using the hot spot detection problem. J. Biomed. Informatics 66: 129-135 (2017) - [j52]Darren A. Natale, Cecilia N. Arighi, Judith A. Blake, Jonathan P. Bona, Chuming Chen, Sheng-Chih Chen, Karen R. Christie, Julie Cowart, Peter D'Eustachio, Alexander D. Diehl, Harold J. Drabkin, William D. Duncan, Hongzhan Huang, Jia Ren, Karen Ross, Alan Ruttenberg, Veronica Shamovsky, Barry Smith, Qinghua Wang, Jian Zhang, Abdelrahman Elsayed, Cathy H. Wu:
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities. Nucleic Acids Res. 45(Database-Issue): D339-D346 (2017) - [c91]José Maria Parente de Oliveira, Barry Smith:
A Diagrammatic Representation for Entities and Mereotopological Relations in Ontologies. ONTOBRAS 2017: 105-110 - [c90]José M. Parente de Oliveira, Barry Smith:
A Visual Representation of Part-Whole Relationships in BFO-Conformant Ontologies. WorldCIST (1) 2017: 184-194 - 2016
- [j51]Andrew D. Spear, Werner Ceusters, Barry Smith:
Functions in Basic Formal Ontology. Appl. Ontology 11(2): 103-128 (2016) - [j50]Jingshan Huang, Karen Eilbeck, Barry Smith, Judith A. Blake, Dejing Dou, Weili Huang, Darren A. Natale, Alan Ruttenberg, Jun Huan, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Harrison J. Strachan, Yongqun He, Shaojie Zhang, Xiaowei Wang, Zixing Liu, Glen M. Borchert, Ming Tan:
The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology. J. Biomed. Semant. 7: 24 (2016) - [j49]Jingshan Huang, Fernando Gutierrez, Harrison J. Strachan, Dejing Dou, Weili Huang, Barry Smith, Judith A. Blake, Karen Eilbeck, Darren A. Natale, Yu Lin, Bin Wu, Nisansa de Silva, Xiaowei Wang, Zixing Liu, Glen M. Borchert, Ming Tan, Alan Ruttenberg:
OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data. J. Biomed. Semant. 7: 25 (2016) - [j48]Jie Zheng, Marcelline R. Harris, Anna Maria Masci, Yu Lin, Alfred O. Hero III, Barry Smith, Yongqun He:
The Ontology of Biological and Clinical Statistics (OBCS) for standardized and reproducible statistical analysis. J. Biomed. Semant. 7: 53 (2016) - [j47]Jingshan Huang, Karen Eilbeck, Barry Smith, Judith A. Blake, Dejing Dou, Weili Huang, Darren A. Natale, Alan Ruttenberg, Jun Huan, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Harrison J. Strachan, Nisansa de Silva, Mohan Vamsi Kasukurthi, Vikash Kumar Jha, Yongqun He, Shaojie Zhang, Xiaowei Wang, Zixing Liu, Glen M. Borchert, Ming Tan:
The development of non-coding RNA ontology. Int. J. Data Min. Bioinform. 15(3): 214-232 (2016) - [c89]Fernanda Farinelli, Mauricio Barcellos Almeida, Peter L. Elkin, Barry Smith:
Interoperability Among Prenatal EHRs: A Formal Ontology Approach. AMIA 2016 - [c88]Niels Grewe, Ludger Jansen, Barry Smith:
Permanent Generic Relatedness and Silent Change. JOWO@FOIS 2016 - [c87]Selja Seppälä, Alan Ruttenberg, Barry Smith:
The Functions of Definitions in Ontologies. FOIS 2016: 37-50 - [c86]Alexander P. Cox, Christopher K. Nebelecky, Ronald Rudnicki, William A. Tagliaferri, John L. Crassidis, Barry Smith:
The Space Object Ontology. FUSION 2016: 146-153 - [c85]Laurel Cooper, Austin Meier, Justin Elser, Justin Preece, Xu Xu, Ryan Kitchen, Botong Qu, Eugene Zhang, Sinisa Todorovic, Pankaj Jaiswal, Marie-Angélique Laporte, Elizabeth Arnaud, Seth Carbon, Chris Mungall, Barry Smith, Georgios V. Gkoutos, John H. Doonan:
The Planteome Project. ICBO/BioCreative 2016 - [c84]William D. Duncan, Travis Allen, Jonathan P. Bona, Olivia Helfer, Barry Smith, Alan Ruttenberg, Alexander D. Diehl:
The ImmPort Antibody Ontology. ICBO/BioCreative 2016 - [c83]Fernanda Farinelli, Maurício Barcellos de Almeida, Peter L. Elkin, Barry Smith:
Dealing with Social and Legal Entities in the Obstetric and Neonatal Domain. ICBO/BioCreative 2016 - [c82]Fernanda Farinelli, Maurício Barcellos de Almeida, Peter L. Elkin, Barry Smith:
Dealing with Elements of Medical Encounters: an Approach Based on the Ontological Realism. ICBO/BioCreative 2016 - [c81]Edison Ong, Zuoshuang Xiang, Jie Zheng, Barry Smith, Yongqun He:
Ontobull and BFOConvert: Web-based Programs to Support Automatic Ontology Conversion. ICBO/BioCreative 2016 - [c80]Barry Smith, Mark Jensen:
The UNEP Ontologies and the OBO Foundry. ICBO/BioCreative 2016 - 2015
- [c79]Jingshan Huang, Karen Eilbeck, Judith A. Blake, Dejing Dou, Darren A. Natale, Alan Ruttenberg, Barry Smith, Michael T. Zimmermann, Guoqian Jiang, Yu Lin, Bin Wu, Yongqun He, Shaojie Zhang, Xiaowei Wang, He Zhang, Zixing Liu, Ming Tan:
A domain ontology for the Non-Coding RNA field. BIBM 2015: 621-624 - [c78]Jingshan Huang, Fernando Gutierrez, Dejing Dou, Judith A. Blake, Karen Eilbeck, Darren A. Natale, Barry Smith, Yu Lin, Xiaowei Wang, Zixing Liu, Ming Tan, Alan Ruttenberg:
A semantic approach for knowledge capture of MIcroRNA-Target gene interactions. BIBM 2015: 975-982 - [c77]Barry Smith, Werner Ceusters:
Aboutness: towards foundations for the Information Artifact Ontology. ICBO 2015 - [c76]Werner Ceusters, Barry Smith:
Biomarkers in the Ontology for General Medical Science. MIE 2015: 155-159 - [c75]Peter Morosoff, Ron Rudnicki, Jason Bryant, Robert Farrell, Barry Smith:
Joint Doctrine Ontology: A Benchmark for Military Information Systems Interoperability. STIDS 2015: 2-9 - [c74]Brian Donohue, Douglas Kutach, Amardeep Bhattal, Dave Braines, Geeth de Mel, Robert Ganger, Tien Pham, Ron Rudnicki, Barry Smith:
Controlled and Uncontrolled English for Ontology Editing. STIDS 2015: 74-81 - 2014
- [j46]Yongqun He, Sirarat Sarntivijai, Yu Lin, Zuoshuang Xiang, Abra Guo, Shelley Zhang, Desikan Jagannathan, Luca Toldo, Cui Tao, Barry Smith:
OAE: The Ontology of Adverse Events. J. Biomed. Semant. 5: 29 (2014) - [j45]Janna Hastings, Gwen A. Frishkoff, Barry Smith, Mark Jensen, Russell A. Poldrack, Jane Lomax, Anita E. Bandrowski, Fahim T. Imam, Jessica A. Turner, Maryann E. Martone:
Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies. Frontiers Neuroinformatics 8: 62 (2014) - [j44]Darren A. Natale, Cecilia N. Arighi, Judith A. Blake, Carol J. Bult, Karen R. Christie, Julie Cowart, Peter D'Eustachio, Alexander D. Diehl, Harold J. Drabkin, Olivia Helfer, Hongzhan Huang, Anna Maria Masci, Jia Ren, Natalia V. Roberts, Karen Ross, Alan Ruttenberg, Veronica Shamovsky, Barry Smith, Meher Shruti Yerramalla, Jian Zhang, Aisha AlJanahi, Irem Çelen, Cynthia Gan, Mengxi Lv, Emily Schuster-Lezell, Cathy H. Wu:
Protein Ontology: a controlled structured network of protein entities. Nucleic Acids Res. 42(Database-Issue): 415-421 (2014) - [c73]Selja Seppälä, Barry Smith, Werner Ceusters:
Applying the Realism-Based Ontology-Versioning Method for Tracking Changes in the Basic Formal Ontology. FOIS 2014: 227-240 - [c72]Werner Ceusters, Chiun Yu Hsu, Barry Smith:
Clinical Data Wrangling using Ontological Realism and Referent Tracking. ICBO 2014: 27-32 - [c71]Jie Zheng, Marcelline R. Harris, Anna Maria Masci, Yu Lin, Alfred O. Hero III, Barry Smith, Yongqun He:
OBCS: The Ontology of Biological and Clinical Statistics. ICBO 2014: 65 - [c70]Albert Goldfain, Barry Smith, Lindsay G. Cowell:
Ontological Representation of CDC Active Bacterial Core Surveillance Case Reports. ICBO 2014: 74-77 - [c69]Erik Thomsen, Frederick Reed, William D. Duncan, Tatanya Malyuta, Barry Smith:
Ontological Support for Living Plan Specification, Execution and Evaluation. STIDS 2014: 10-17 - [c68]Brian Donohue, J. Neil Otte, Barry Smith:
An Ontological Approach to Territorial Disputes. STIDS 2014: i-ix - 2013
- [j43]Mark Jensen, Alexander P. Cox, Naveed Chaudhry, Marcus Ng, Donat Sule, William D. Duncan, Patrick Ray, Bianca Weinstock-Guttman, Barry Smith, Alan Ruttenberg, Kinga Szigeti, Alexander D. Diehl:
The neurological disease ontology. J. Biomed. Semant. 4: 42 (2013) - [j42]Pier Luigi Buttigieg, Norman Morrison, Barry Smith, Christopher J. Mungall, Suzanna E. Lewis:
The environment ontology: contextualising biological and biomedical entities. J. Biomed. Semant. 4: 43 (2013) - [c67]Albert Goldfain, Min Xu, Jonathan P. Bona, Barry Smith:
Ontology Based Annotation of Contextualized Vital Signs. ICBO 2013: 28-33 - [c66]Mark Jensen, Alexander P. Cox, Barry Smith, Alexander D. Diehl:
Representing Disease Courses: An Application of the Neurological Disease Ontology to Multiple Sclerosis Typology. ICBO 2013: 121 - [c65]Barry Smith:
Introduction to the Logic of Definitions. VDOS+DO@ICBO 2013 - [c64]Barry Smith, Tatiana Malyuta, Ron Rudnicki, William Mandrick, David Salmen, Peter Morosoff, Danielle K. Duff, James Schoening, Kesny Parent:
IAO-Intel: An Ontology of Information Artifacts in the Intelligence Domain. STIDS 2013: 33-40 - 2012
- [j41]Mark A. Musen, Natalya Fridman Noy, Nigam H. Shah, Patricia L. Whetzel, Christopher G. Chute, Margaret-Anne D. Storey, Barry Smith:
The National Center for Biomedical Ontology. J. Am. Medical Informatics Assoc. 19(2): 190-195 (2012) - [c63]Albert Goldfain, Lindsay G. Cowell, Barry Smith:
Constructing a Lattice of Infectious Disease Ontologies from a Staphylococcus aureus Isolate Repository. ICBO 2012 - [c62]Janna Hastings, Nicolas Le Novère, Werner Ceusters, Kevin Mulligan, Barry Smith:
Wanting what we don't want to want: Representing addiction in interoperable bio-ontologies. ICBO 2012 - [c61]Ramona L. Walls, Barry Smith, Justin Elser, Albert Goldfain, Dennis W. Stevenson, Pankaj Jaiswal:
A plant disease extension of the Infectious Disease Ontology. ICBO 2012 - [c60]Barry Smith, Tatiana Malyuta, William Mandrick, Chia Fu, Kesny Parent, Milan Patel:
Horizontal Integration of Warfighter Intelligence Data: A Shared Semantic Resource for the Intelligence Community. STIDS 2012: 112-119 - 2011
- [j40]Fabian Neuhaus, Elizabeth Florescu, Antony Galton, Michael Grüninger, Nicola Guarino, Leo Obrst, Arturo Sanchez, Amanda Vizedom, Peter Yim, Barry Smith:
Creating the ontologists of the future. Appl. Ontology 6(1): 91-98 (2011) - [j39]Stefano Borgo, Riichiro Mizoguchi, Barry Smith:
On the ontology of functions. Appl. Ontology 6(2): 99-104 (2011) - [j38]Carol J. Bult, Harold J. Drabkin, Alexei V. Evsikov, Darren A. Natale, Cecilia N. Arighi, Natalia V. Roberts, Alan Ruttenberg, Peter D'Eustachio, Barry Smith, Judith A. Blake, Cathy H. Wu:
The Representation of Protein Complexes in the Protein Ontology (PRO). BMC Bioinform. 12: 371 (2011) - [j37]Barry Smith, Richard H. Scheuermann:
Ontologies for clinical and translational research: Introduction. J. Biomed. Informatics 44(1): 3-7 (2011) - [j36]Albert Goldfain, Barry Smith, Lindsay G. Cowell:
Towards an ontological representation of resistance: The case of MRSA. J. Biomed. Informatics 44(1): 35-41 (2011) - [j35]Darren A. Natale, Cecilia N. Arighi, Winona C. Barker, Judith A. Blake, Carol J. Bult, Michael Caudy, Harold J. Drabkin, Peter D'Eustachio, Alexei V. Evsikov, Hongzhan Huang, Jules Nchoutmboube, Natalia V. Roberts, Barry Smith, Jian Zhang, Cathy H. Wu:
The Protein Ontology: a structured representation of protein forms and complexes. Nucleic Acids Res. 39(Database-Issue): 539-545 (2011) - [j34]Pierre Grenon, Barry Smith:
Foundations of an ontology of philosophy. Synth. 182(2): 185-204 (2011) - [c59]Janna Hastings, Werner Ceusters, Barry Smith, Kevin Mulligan:
The Emotion Ontology: Enabling Interdisciplinary Research in the Affective Sciences. CONTEXT 2011: 119-123 - [c58]Jiye Ai, Mauricio Barcellos Almeida, André Queiroz de Andrade, Alan Ruttenberg, David Tai Wai Wong, Barry Smith:
Towards a Body Fluids Ontology: A Unified Application Ontology for Basic and Translational Science. ICBO 2011 - [c57]Mauricio Barcellos Almeida, Anna Barbara de Freitas Carneiro Proietti, Jiye Ai, Barry Smith:
The Blood Ontology: An Ontology in the Domain of Hematology. ICBO 2011 - [c56]Cecilia N. Arighi, Darren A. Natale, Judith A. Blake, Carol J. Bult, Michael Caudy, Alexander D. Diehl, Harold J. Drabkin, Peter D'Eustachio, Alexei V. Evsikov, Hongzhan Huang, Natalia V. Roberts, Alan Ruttenberg, Barry Smith, Jian Zhang, Cathy H. Wu:
Protein-Centric Connection of Biomedical Knowledge: Protein Ontology (PRO) Research and Annotation Tools. ICBO 2011 - [c55]Janna Hastings, Werner Ceusters, Barry Smith, Kevin Mulligan:
Dispositions and Processes in the Emotion Ontology. ICBO 2011 - [c54]Jobst Landgrebe, Barry Smith:
The HL7 Approach to Semantic Interoperability. ICBO 2011 - [c53]Patricia L. Whetzel, Natasha F. Noy, Nigam Shah, Paul R. Alexander, Michael Dorf, Ray W. Fergerson, Margaret-Anne D. Storey, Barry Smith, Christopher G. Chute, Mark A. Musen:
Bioportal: Ontologies and Integrated Data Resources at the Click of a Mouse. ICBO 2011 - [c52]David Salmen, Tatiana Malyuta, Alan Hansen, Shaun Cronen, Barry Smith:
Integration of Intelligence Data through Semantic Enhancement. STIDS 2011: 6-13 - 2010
- [j33]Barry Smith, Werner Ceusters:
Ontological realism: A methodology for coordinated evolution of scientific ontologies. Appl. Ontology 5(3-4): 139-188 (2010) - [j32]Werner Ceusters, Barry Smith:
Foundations for a realist ontology of mental disease. J. Biomed. Semant. 1: 10 (2010) - [j31]Jiye Ai, Barry Smith, Wong T. David:
Saliva Ontology: An ontology-based framework for a Salivaomics Knowledge Base. BMC Bioinform. 11: 302 (2010) - [j30]Gunnar O. Klein, Barry Smith:
Concept Systems and Ontologies: Recommendations for Basic Terminology. Inf. Media Technol. 5(2): 720-728 (2010) - [c51]Albert Goldfain, Barry Smith, Lindsay G. Cowell:
Dispositions and the Infectious Disease Ontology. FOIS 2010: 400-413 - [c50]Werner Ceusters, Barry Smith:
A Unified Framework for Biomedical Terminologies and Ontologies. MedInfo 2010: 1050-1054
2000 – 2009
- 2009
- [j29]Cecilia N. Arighi, Hongfang Liu, Darren A. Natale, Winona C. Barker, Harold J. Drabkin, Judith A. Blake, Barry Smith, Cathy H. Wu:
TGF-beta signaling proteins and the Protein Ontology. BMC Bioinform. 10(S-5) (2009) - [j28]Anna Maria Masci, Cecilia N. Arighi, Alexander D. Diehl, Anne E. Lieberman, Chris Mungall, Richard H. Scheuermann, Barry Smith, Lindsay G. Cowell:
An improved ontological representation of dendritic cells as a paradigm for all cell types. BMC Bioinform. 10 (2009) - [j27]Daniel Schober, Barry Smith, Suzanna E. Lewis, Waclaw Kusnierczyk, Jane Lomax, Chris Mungall, Chris F. Taylor, Philippe Rocca-Serra, Susanna-Assunta Sansone:
Survey-based naming conventions for use in OBO Foundry ontology development. BMC Bioinform. 10 (2009) - [j26]Thomas Bittner, Maureen Donnelly, Barry Smith:
A spatio-temporal ontology for geographic information integration. Int. J. Geogr. Inf. Sci. 23(6): 765-798 (2009) - [c49]Werner Ceusters, Maria Capolupo, Barry Smith, Georges De Moor:
An Evolutionary Approach to the Representation of Adverse Events. MIE 2009: 537-541 - [c48]Bernd Blobel, Dipak Kalra, Marc Koehn, Ken Lunn, Peter Pharow, Pekka Ruotsalainen, Stefan Schulz, Barry Smith:
The Role of Ontologies for Sustainable, Semantically Interoperable and Trustworthy EHR Solutions. MIE 2009: 953-957 - 2008
- [j25]David P. Hill, Barry Smith, Monica S. McAndrews-Hill, Judith A. Blake:
Gene Ontology annotations: what they mean and where they come from. BMC Bioinform. 9(S-5) (2008) - [j24]Holger Stenzhorn, Stefan Schulz, Martin Boeker, Barry Smith:
Adapting Clinical Ontologies in Real-World Environments. J. Univers. Comput. Sci. 14(22): 3767-3780 (2008) - [c47]Barry Smith:
Ontology (Science). FOIS 2008: 21-35 - [c46]Mathias Brochhausen, Gabriele Weiler, Luis Martín, Cristian Cocos, Holger Stenzhorn, Norbert M. Graf, Martin Doerr, Manolis Tsiknakis, Barry Smith:
Applications of the ACGT Master Ontology on Cancer. OTM Workshops 2008: 1046-1055 - [p3]Fabian Neuhaus, Barry Smith:
Modelling Principles and Methodologies - Relations in Anatomical Ontologies. Anatomy Ontologies for Bioinformatics 2008: 289-306 - [p2]Melissa A. Haendel, Fabian Neuhaus, David Osumi-Sutherland, Paula M. Mabee, José L. V. Mejino Jr., Chris Mungall, Barry Smith:
CARO - The Common Anatomy Reference Ontology. Anatomy Ontologies for Bioinformatics 2008: 327-349 - 2007
- [j23]Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun:
Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies. Artif. Intell. Medicine 39(3): 183-195 (2007) - [j22]Darren A. Natale, Cecilia N. Arighi, Winona C. Barker, Judith A. Blake, Ti-Cheng Chang, Zhang-Zhi Hu, Hongfang Liu, Barry Smith, Cathy H. Wu:
Framework for a Protein Ontology. BMC Bioinform. 8(S-9) (2007) - [j21]Werner Ceusters, Peter L. Elkin, Barry Smith:
Negative findings in electronic health records and biomedical ontologies: A realist approach. Int. J. Medical Informatics 76(S3): S326-S333 (2007) - [j20]Werner Ceusters, Barry Smith:
Referent tracking for Digital Rights Management. Int. J. Metadata Semant. Ontologies 2(1): 45-53 (2007) - [c45]Werner Ceusters, Kent A. Spackman, Barry Smith:
Would SNOMED CT benefit from Realism-Based Ontology Evolution? AMIA 2007 - [c44]Ron Rudnicki, Werner Ceusters, Shahid Manzoor, Barry Smith:
What Particulars are Referred to in Electronic Health Record Data? A Case Study in Integrating Referent Tracking into an EHR Application. AMIA 2007 - [c43]Lee T. Sam, Tara Borlawsky, Ying Tao, Jianrong Li, Carol Friedman, Barry Smith, Yves A. Lussier:
Information-Theoretic Classification of SNOMED Improves the Organization of Context-Sensitive Excerpts from Cochrane Reviews. AMIA 2007 - [c42]Werner Ceusters, Barry Smith:
Referent Tracking and its Applications. I3 2007 - [c41]Terry L. Janssen, Herbert Basik, Mike Dean, Barry Smith:
A Multi-INT Semantic Reasoning Framework for Intelligence Analysis Support. OIC 2007: 57-69 - [e2]Mark A. Musen, Michael Schroeder, Barry Smith:
Towards Interoperability of Biomedical Ontologies, 27.03. - 30.03.2007. Dagstuhl Seminar Proceedings 07132, Internationales Begegnungs- und Forschungszentrum für Informatik (IBFI), Schloss Dagstuhl, Germany 2007 [contents] - [i1]Mark A. Musen, Michael Schroeder, Barry Smith:
07132 Report - Towards Interoperability of Biomedical Ontologies. Towards Interoperability of Biomedical Ontologies 2007 - 2006
- [j19]Leo Obrst, Patrick Cassidy, Steve Ray, Barry Smith, Dagobert Soergel, Matthew West, Peter Yim:
The 2006 Upper Ontology Summit Joint Communiqué. Appl. Ontology 1(2): 203-211 (2006) - [j18]Jacob Köhler, Katherine Munn, Alexander Rüegg, Andre Skusa, Barry Smith:
Quality control for terms and definitions in ontologies and taxonomies. BMC Bioinform. 7: 212 (2006) - [j17]Anand Kumar, Yum Lina Yip, Barry Smith, Pierre Grenon:
Bridging the gap between medical and bioinformatics: An ontological case study in colon carcinoma. Comput. Biol. Medicine 36(7-8): 694-711 (2006) - [j16]Jonathan Simon, Mariana Casella dos Santos, James Matthew Fielding, Barry Smith:
Formal ontology for natural language processing and the integration of biomedical databases. Int. J. Medical Informatics 75(3-4): 224-231 (2006) - [j15]James J. Cimino, Barry Smith:
Introduction: International Medical Informatics Association Working Group 6 and the 2005 Rome Conference. J. Biomed. Informatics 39(3): 249-251 (2006) - [j14]Barry Smith:
From concepts to clinical reality: An essay on the benchmarking of biomedical terminologies. J. Biomed. Informatics 39(3): 288-298 (2006) - [j13]Christiane Fellbaum, Udo Hahn, Barry Smith:
Towards new information resources for public health - From WordNet to MedicalWordNet. J. Biomed. Informatics 39(3): 321-332 (2006) - [j12]Werner Ceusters, Barry Smith:
Strategies for referent tracking in electronic health records. J. Biomed. Informatics 39(3): 362-378 (2006) - [j11]Werner Ceusters, Barry Smith:
Referent tracking for treatment optimisation in schizophrenic patients: A case study in applying philosophical ontology to diagnostic algorithms. J. Web Semant. 4(3): 229-236 (2006) - [c40]Werner Ceusters, Barry Smith:
A Realism-Based Approach to the Evolution of Biomedical Ontologies. AMIA 2006 - [c39]Barry Smith:
Against Idiosyncrasy in Ontology Development. FOIS 2006: 15-26 - [c38]Barry Smith, Waclaw Kusnierczyk, Daniel Schober, Werner Ceusters:
Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain. KR-MED 2006 - [c37]Barry Smith, Werner Ceusters:
HL7 RIM: An Incoherent Standard. MIE 2006: 133-138 - [c36]Werner Ceusters, Peter L. Elkin, Barry Smith:
Referent Tracking: The Problem of Negative Findings. MIE 2006: 741-746 - 2005
- [c35]Anand Kumar, Barry Smith:
Oncology Ontology in the NCI Thesaurus. AIME 2005: 213-220 - [c34]Cornelius Rosse, Anand Kumar, José L. V. Mejino Jr., Daniel L. Cook, Landon T. Detwiler, Barry Smith:
A Strategy for Improving and Integrating Biomedical Ontologies. AMIA 2005 - [c33]Stefan Schulz, Philipp Daumke, Barry Smith, Udo Hahn:
How to Distinguish Parthood from Location in Bio-Ontologies. AMIA 2005 - [c32]Barry Smith, Werner Ceusters:
An Ontology-Based Methodology for the Migration of Biomedical Terminologies to Electronic Health Records. AMIA 2005 - [c31]Barry Smith, José L. V. Mejino Jr., Stefan Schulz, Anand Kumar, Cornelius Rosse:
Anatomical Information Science. COSIT 2005: 149-164 - [c30]Werner Ceusters, Barry Smith:
Tracking Referents in Electronic Health Records. MIE 2005: 71-76 - [c29]Anand Kumar, Yum Lina Yip, Barry Smith, Dirk Marwede, Daniel Novotný:
An Ontology for Carcinoma Classification for Clinical Bioinformatics. MIE 2005: 635-640 - [c28]Barry Smith, Werner Ceusters, Rita Temmerman:
Wüsteria. MIE 2005: 647-652 - [c27]Louis J. Goldberg, Werner Ceusters, John Eisner, Barry Smith:
The Significance of SNODENT. MIE 2005: 737-742 - 2004
- [j10]Thomas Bittner, Maureen Donnelly, Barry Smith:
Endurants and perdurants in directly depicting ontologies. AI Commun. 17(4): 247-258 (2004) - [j9]Jean-Luc Verschelde, Mariana Casella dos Santos, Tom Deray, Barry Smith, Werner Ceusters:
Ontology-assisted database integration to support natural language processing and biomedical data-mining. J. Integr. Bioinform. 1(1) (2004) - [j8]Pierre Grenon, Barry Smith:
SNAP and SPAN: Towards Dynamic Spatial Ontology. Spatial Cogn. Comput. 4(1): 69-104 (2004) - [c26]Anand Kumar, Barry Smith:
Towards a Proteomics Meta-Classification. BIBE 2004: 419-426 - [c25]Barry Smith, Christiane Fellbaum:
Medical WordNet: A New Methodology for the Construction and Validation of Information Resources for Consumer Health. COLING 2004 - [c24]Barry Smith, Jacob Köhler, Anand Kumar:
On the Application of Formal Principles to Life Science Data: a Case Study in the Gene Ontology. DILS 2004: 79-94 - [c23]Werner Ceusters, Barry Smith, James Matthew Fielding:
LinkSuite™: Formally Robust Ontology-Based Data and Information Integration. DILS 2004: 124-139 - [c22]James Matthew Fielding, Jonathan Simon, Werner Ceusters, Barry Smith:
Ontological Theory for Ontological Engineering: Biomedical Systems Information Integration. KR 2004: 114-120 - [c21]Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun:
Investigating subsumption in DL-based terminologies: A Case Study in SNOMED CT . KR-MED 2004: 12-20 - [c20]Barry Smith, Cornelius Rosse:
The Role of Foundational Relations in the Alignment of Biomedical Ontologies. MedInfo 2004: 444-448 - [c19]Werner Ceusters, Barry Smith, Anand Kumar, Christoffel Dhaen:
Ontology-Based Error Detection in SNOMED-CT®. MedInfo 2004: 482-486 - [c18]Jonathan Simon, James Matthew Fielding, Barry Smith:
Using Philosophy to Improve the Coherence and Interoperability of Applications Ontologies: A Field Report on the Collaboration of IFOMIS and L&C. WSPI 2004 - [e1]Pierre Grenon, Christopher Menzel, Barry Smith:
Proceedings of the KI2003 Workshop on Reference Ontologies and Application Ontologies, Hamburg, Germany, September 16, 2003. CEUR Workshop Proceedings 94, CEUR-WS.org 2004 [contents] - 2003
- [j7]Thomas Bittner, Barry Smith:
Vague Reference and Approximating Judgments. Spatial Cogn. Comput. 3(2-3): 137-156 (2003) - [c17]Anand Kumar, Barry Smith:
Ontology for Task-Based Clinical Guidelines and the Theory of Granular Partitions. AIME 2003: 71-75 - [c16]Barry Smith, Igor Papakin, Katherine Munn:
Bodily Systems and the Modular Structure of the Human Body. AIME 2003: 86-90 - [c15]Barry Smith, Jennifer Williams, Steffen Schulze-Kremer:
The Ontology of the Gene Ontology. AMIA 2003 - [c14]Maureen Donnelly, Barry Smith:
Layers: A New Approach to Locating Objects in Space. COSIT 2003: 46-60 - [c13]Anand Kumar, Barry Smith:
The Universal Medical Language System and the Gene Ontology: Some Critical Reflections. KI 2003: 135-148 - [c12]Werner Ceusters, Ignace Desimpel, Barry Smith, Stefan Schulz:
Using Cross-Lingual Information to Cope with Underspecification in Formal Ontologies. MIE 2003: 391-396 - [p1]Thomas Bittner, Barry Smith:
A Theory of Granular Partitions. Foundations of Geographic Information Science 2003: 117-149 - 2002
- [j6]Barry Smith, Berit Brogaard:
Quantum Mereotopology. Ann. Math. Artif. Intell. 36(1-2): 153-175 (2002) - [j5]Barry Smith, Achille C. Varzi:
Surrounding space the ontology of organism-environment relations. Theory Biosci. 121(2): 139-162 (2002) - 2001
- [j4]Barry Smith, David M. Mark:
Geographical categories: an ontological investigation. Int. J. Geogr. Inf. Sci. 15(7): 591-612 (2001) - [c11]Barry Smith:
True Grid. COSIT 2001: 14-27 - [c10]Thomas Bittner, Barry Smith:
A Taxonomy of Granular Partitions. COSIT 2001: 28-43 - [c9]David M. Mark, André Skupin, Barry Smith:
Features, Objects, and Other Things: Ontological Distinctions in the Geographic Domain. COSIT 2001: 489-502 - [c8]Wolfgang Degen, Barbara Heller, Heinrich Herre, Barry Smith:
GOL: toward an axiomatized upper-level ontology. FOIS 2001: 34-46 - [c7]Thomas Bittner, Barry Smith:
Granular partitions and vagueness. FOIS 2001: 309-320 - [c6]Barry Smith, Christopher A. Welty:
FOIS introduction: Ontology - towards a new synthesis. FOIS 2001: iii-ix
1990 – 1999
- 1999
- [c5]Barry Smith, Achille C. Varzi:
The Formal Structure of Ecological Contexts. CONTEXT 1999: 339-350 - [c4]Barry Smith:
Agglomerations. COSIT 1999: 267-282 - [c3]David M. Mark, Barry Smith, Barbara Tversky:
Ontology and Geographic Objects: An Empirical Study of Cognitive Categorization. COSIT 1999: 283-298 - 1997
- [c2]Barry Smith, Achille C. Varzi:
Fiat and Bona Fide Boundaries: Towards on Ontology of Spatially Extended Objects. COSIT 1997: 103-119 - 1996
- [j3]Barry Smith:
Mereotopology: A Theory of Parts and Boundaries. Data Knowl. Eng. 20(3): 287-303 (1996) - 1995
- [j2]Barry Smith:
Formal ontology, common sense and cognitive science. Int. J. Hum. Comput. Stud. 43(5-6): 641-667 (1995) - [c1]Barry Smith:
On Drawing Lines on a Map. COSIT 1995: 475-484 - 1994
- [j1]Robert E. Filman, Donald Nute, Merrie Bergmann, Thomas Tymoczko, Barry Smith, Gerard Ellis, Ronald N. Giere:
Book reviews. Minds Mach. 4(2): 233-257 (1994)
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2025-01-08 20:33 CET by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
