CAPG: comprehensive allopolyploid genotyper. - Kulkarni, Roshan; Zhang, Yudi; Cannon, Steven B.; Dorman, Karin S. (Bioinform., 2023)

Accurate estimation of molecular counts from amplicon sequence data with unique molecular identifiers. - Peng, Xiyu; Dorman, Karin S. (Bioinform., 2023)

Predicting allosteric pockets in protein biological assemblages. - Kumar, Ambuj; Kaynak, Burak T.; Dorman, Karin S.; Doruker, Pemra; Jernigan, Robert L. (Bioinform., 2023)

Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier. - Kumar, Ambuj; Khade, Pranav M.; Dorman, Karin S.; Jernigan, Robert L. (Bioinform., 2022)

An efficient k-modes algorithm for clustering categorical datasets. - Dorman, Karin S.; Maitra, Ranjan (Stat. Anal. Data Min., 2022)

AmpliCI: a high-resolution model-based approach for denoising Illumina amplicon data. - Peng, Xiyu; Dorman, Karin S. (Bioinform., 2021)

Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor. - Velásquez-Zapata, Valeria; Elmore, J. Mitch; Banerjee, Sagnik; Dorman, Karin S.; Wise, Roger P. (PLoS Comput. Biol., 2021)

An Efficient $k$-modes Algorithm for Clustering Categorical Datasets. - Dorman, Karin S.; Maitra, Ranjan (CoRR, 2020)

phylostratr: a framework for phylostratigraphy. - Arendsee, Zebulun; Li, Jing; Singh, Urminder; Seetharam, Arun S.; Dorman, Karin S.; Wurtele, Eve Syrkin (Bioinform., 2019)

Predicting failure-proneness in an evolving software product line. - Krishnan, Sandeep; Strasburg, Chris; Lutz, Robyn R.; Goseva-Popstojanova, Katerina; Dorman, Karin S. (Inf. Softw. Technol., 2013)

PREMIER Turbo: Probabilistic error-correction using Markov inference in errored reads using the turbo principle. - Yin, Xin; Song, Zhao; Dorman, Karin S.; Ramamoorthy, Aditya (2013)

PREMIER - PRobabilistic error-correction using Markov inference in errored reads. - Yin, Xin; Song, Zhao; Dorman, Karin S.; Ramamoorthy, Aditya (2013)

PREMIER - PRobabilistic Error-correction using Markov Inference in Errored Reads - Yin, Xin; Song, Zhao; Dorman, Karin S.; Ramamoorthy, Aditya (CoRR, 2013)

Repeat-aware modeling and correction of short read errors. - Yang, Xiao; Aluru, Srinivas; Dorman, Karin S. (BMC Bioinform., 2011)

Workshop: Flexible read decomposition for improved short read error correction. - Yang, Xiao; Dorman, Karin S.; Aluru, Srinivas (2011)

Reptile: representative tiling for short read error correction. - Yang, Xiao; Dorman, Karin S.; Aluru, Srinivas (Bioinform., 2010)

Masquerade Detection in Network Environments. - Strasburg, Chris; Krishnan, Sandeep; Dorman, Karin S.; Basu, Samik; Wong, Johnny S. (2010)

Rapid Genotyping for HIV Using Supervised Learning Tools. - Rajaram, Misha L.; Dorman, Karin S. (2009)

mlegp: statistical analysis for computer models of biological systems using R. - Dancik, Garrett M.; Dorman, Karin S. (Bioinform., 2008)

cBrother: relaxing parental tree assumptions for Bayesian recombination detection. - Fang, Fang; Ding, Jing; Minin, Vladimir N.; Suchard, Marc A.; Dorman, Karin S. (Bioinform., 2007)

Hot and Cold: Spatial Fluctuation in HIV-1 Recombination Rates. - Rajaram, Misha L.; Minin, Vladimir N.; Suchard, Marc A.; Dorman, Karin S. (2007)

Markov Model Variants for Appraisal of Coding Potential in Plant DNA. - Sparks, Michael E.; Brendel, Volker; Dorman, Karin S. (2007)

Dual multiple change-point model leads to more accurate recombination detection. - Minin, Vladimir N.; Dorman, Karin S.; Fang, Fang; Suchard, Marc A. (Bioinform., 2005)

In the Garden of Branching Processes. - Dorman, Karin S.; Sinsheimer, Janet S.; Lange, Kenneth (SIAM Rev., 2004)