![](https://dblp.org/img/logo.ua.320x120.png)
![](https://dblp.org/img/dropdown.dark.16x16.png)
![](https://dblp.org/img/peace.dark.16x16.png)
Остановите войну!
for scientists:
![search dblp search dblp](https://dblp.org/img/search.dark.16x16.png)
![search dblp](https://dblp.org/img/search.dark.16x16.png)
default search action
Michiel J. L. de Hoon
Person information
Refine list
![note](https://dblp.org/img/note-mark.dark.12x12.png)
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2021
- [j11]Imad Abugessaisa
, Jordan A. Ramilowski
, Marina Lizio, Jesicca Severin
, Akira Hasegawa, Jayson Harshbarger, Atsushi Kondo, Shuhei Noguchi, Chi Wai Yip, Jasmine Li Ching Ooi, Michihira Tagami, Fumi Hori, Saumya Agrawal
, Chung-Chau Hon
, Mélissa Cardon, Shuya Ikeda, Hiromasa Ono, Hidemasa Bono
, Masaki Kato, Kosuke Hashimoto, Alessandro Bonetti, Norio Kobayashi, Jay W. Shin, Michiel J. L. de Hoon
, Yoshihide Hayashizaki, Piero Carninci
, Hideya Kawaji, Takeya Kasukawa
:
FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs. Nucleic Acids Res. 49(Database-Issue): D892-D898 (2021)
2010 – 2019
- 2019
- [j10]Marina Lizio, Imad Abugessaisa
, Shuhei Noguchi, Atsushi Kondo, Akira Hasegawa, Chung-Chau Hon
, Michiel J. L. de Hoon
, Jessica Severin, Shinya Oki
, Yoshihide Hayashizaki, Piero Carninci
, Takeya Kasukawa
, Hideya Kawaji
:
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases. Nucleic Acids Res. 47(Database-Issue): D752-D758 (2019) - 2017
- [j9]Trisevgeni Rapakoulia
, Xin Gao
, Yi Huang, Michiel J. L. de Hoon
, Mariko Okada-Hatakeyama, Harukazu Suzuki, Erik Arner:
Genome-scale regression analysis reveals a linear relationship for promoters and enhancers after combinatorial drug treatment. Bioinform. 33(23): 3696-3700 (2017) - 2016
- [j8]Hans Ienasescu, Kang Li, Robin Andersson
, Morana Vitezic
, Sarah Rennie
, Yun Chen, Kristoffer Vitting-Seerup
, Emil Lagoni, Mette Boyd, Jette Bornholdt, Michiel J. L. de Hoon
, Hideya Kawaji
, Timo Lassmann
, The Fantom Consortium, Yoshihide Hayashizaki, Alistair R. R. Forrest
, Piero Carninci
, Albin Sandelin
:
On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase. Database J. Biol. Databases Curation 2016 (2016) - 2014
- [j7]The Fantom Consortium, RIKEN PMII, RIKEN CLST (DGT), Alistair R. R. Forrest, Hideya Kawaji, Michael Rehli, J. Kenneth Baillie, Michiel J. L. de Hoon, Vanja Haberle, Timo Lassmann, Ivan V. Kulakovskiy, Marina Lizio, Masayoshi Itoh, Robin Andersson, Christopher J. Mungall, Terrence F. Meehan, Sebastian Schmeier, Nicolas Bertin, Mette Jørgensen, Emmanuel Dimont, Erik Arner, Christian Schmidl, Ulf Schaefer, Yulia A. Medvedeva
, Charles Plessy, Morana Vitezic
, Jessica Severin, Colin A. M. Semple, Yuri Ishizu, Robert S. Young, Margherita Francescatto, Intikhab Alam
, Davide Albanese, Gabriel M. Altschuler, Takahiro Arakawa, John A. C. Archer, Peter Arner, Magda Babina, Sarah Rennie, Piotr J. Balwierz, Anthony G. Beckhouse, Swati Pradhan-Bhatt, Judith A. Blake, Antje Blumenthal, Beatrice Bodega, Alessandro Bonetti, James Briggs, Frank Brombacher, A. Maxwell Burroughs, Andrea Califano, Carlo V. Cannistraci, Daniel Carbajo, Yun Chen, Marco Chierici
, Yari Ciani
, Hans Clevers, Emiliano Dalla, Carrie A. Davis, Michael Detmar, Alexander D. Diehl, Taeko Dohi, Finn Drabløs, Albert S. B. Edge, Matthias Edinger, Karl Ekwall, Mitsuhiro Endoh, Hideki Enomoto, Michela Fagiolini, Lynsey Fairbairn, Hai Fang, Mary C. Farach-Carson, Geoffrey J. Faulkner, Alexander V. Favorov, Malcolm E. Fisher
, Martin C. Frith, Rie Fujita, Shiro Fukuda, Cesare Furlanello, Masaaki Furuno, Jun-ichi Furusawa, Teunis B. Geijtenbeek, Andrew P. Gibson, Thomas R. Gingeras, Daniel Goldowitz, Julian Gough, Sven Guhl, Reto Guler, Stefano Gustincich, Thomas J. Ha, Masahide Hamaguchi, Mitsuko Hara, Matthias Harbers, Jayson Harshbarger, Akira Hasegawa, Yuki Hasegawa, Takehiro Hashimoto, Meenhard Herlyn, Kelly J. Hitchens, Shannan J. Ho Sui, Oliver M. Hofmann, Ilka Hoof, Fumi Hori, Lukasz Huminiecki, Kei Iida, Tomokatsu Ikawa, Boris R. Jankovic, Hui Jia, Anagha Joshi, Giuseppe Jurman, Bogumil Kaczkowski, Chieko Kai, Kaoru Kaida, Ai Kaiho, Kazuhiro Kajiyama, Mutsumi Kanamori-Katayama, Artem S. Kasianov, Takeya Kasukawa, Shintaro Katayama, Sachi Kato, Shuji Kawaguchi, Hiroshi Kawamoto, Yuki I. Kawamura, Tsugumi Kawashima, Judith S. Kempfle, Tony J. Kenna, Juha Kere
, Levon M. Khachigian, Toshio Kitamura, S. Peter Klinken, Alan J. Knox, Miki Kojima, Soichi Kojima, Naoto Kondo, Haruhiko Koseki, Shigeo Koyasu, Sarah Krampitz, Atsutaka Kubosaki, Andrew T. Kwon, Jeroen F. J. Laros, Weonju Lee, Andreas Lennartsson
, Kang Li, Berit Lilje, Leonard Lipovich, Alan Mackay-Sim, Ri-ichiroh Manabe, Jessica Cara Mar, Benoit Marchand, Anthony Mathelier, Niklas Mejhert, Alison M. Meynert, Yosuke Mizuno, David A. de Lima Morais, Hiromasa Morikawa, Mitsuru Morimoto, Kazuyo Moro, Efthymios Motakis, Hozumi Motohashi, Christine Mummery, Mitsuyoshi Murata, Sayaka Nagao-Sato, Yutaka Nakachi, Fumio Nakahara, Toshiyuki Nakamura, Yukio Nakamura, Kenichi Nakazato, Erik van Nimwegen, Noriko Ninomiya, Hiromi Nishiyori, Shohei Noma, Tadasuke Nozaki, Soichi Ogishima, Naganari Ohkura, Hiroko Ohmiya, Hiroshi Ohno, Mitsuhiro Ohshima, Mariko Okada-Hatakeyama, Yasushi Okazaki, Valerio Orlando, Dmitry A. Ovchinnikov, Arnab Pain, Robert Passier, Margaret Patrikakis, Helena Persson
, Silvano Piazza, James G. D. Prendergast, Owen J. L. Rackham
, Jordan A. Ramilowski, Mamoon Rashid
, Timothy Ravasi, Patrizia Rizzu, Marco Roncador, Sugata Roy, Morten B. Rye, Eri Saijyo, Antti Sajantila, Akiko Saka, Shimon Sakaguchi, Mizuho Sakai, Hiroki Sato, Hironori Sato, Suzana Savvi, Alka Saxena, Claudio Schneider, Erik A. Schultes, Gundula G. Schulze-Tanzil, Anita Schwegmann, Thierry Sengstag, Guojun Sheng, Hisashi Shimoji, Yishai Shimoni, Jay W. Shin, Christophe Simon, Daisuke Sugiyama, Takaaki Sugiyama, Masanori Suzuki, Naoko Suzuki, Rolf K. Swoboda, Peter A. C. 't Hoen, Michihira Tagami, Naoko Takahashi, Jun Takai, Hiroshi Tanaka, Hideki Tatsukawa, Zuotian Tatum, Mark Thompson, Hiroo Toyoda, Tetsuro Toyoda, Eivind Valen, Marc van de Wetering, Linda M. van den Berg, Roberto Verardo, Dipti Vijayan, Ilya E. Vorontsov
, Wyeth W. Wasserman, Shoko Watanabe, Christine A. Wells, Louise N. Winteringham, Ernst Wolvetang, Emily J. Wood, Yoko Yamaguchi, Masayuki Yamamoto, Misako Yoneda, Yohei Yonekura, Shigehiro Yoshida, Susan E. Zabierowski, Peter G. Zhang, Xiaobei Zhao, Silvia Zucchelli, Kim M. Summers, Harukazu Suzuki, Carsten O. Daub, Jun Kawai, Peter Heutink, Winston Hide
, Tom C. Freeman, Boris Lenhard, Vladimir B. Bajic, Martin S. Taylor, Vsevolod J. Makeev, Albin Sandelin, David A. Hume, Piero Carninci, Yoshihide Hayashizaki:
A promoter-level mammalian expression atlas. Nat. 507(7493): 462-470 (2014) - 2011
- [c7]Yasumasa Kimura, Michiel J. L. de Hoon
, Shintaro Aoki, Yuri Ishizu, Carsten O. Daub, Alexander Lezhava, Erik Arner, Yoshihide Hayashizaki, Yuki Kawai, Yasushi Kogo:
Optimization of turn-back primers in isothermal amplification. BIBM Workshops 2011: 909-911
2000 – 2009
- 2009
- [j6]Peter J. A. Cock, Tiago Antao
, Jeffrey T. Chang, Brad A. Chapman
, Cymon J. Cox
, Andrew Dalke, Iddo Friedberg
, Thomas Hamelryck
, Frank Kauff, Bartek Wilczynski
, Michiel J. L. de Hoon
:
Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinform. 25(11): 1422-1423 (2009) - [j5]Takehiro Hashimoto, Michiel J. L. de Hoon
, Sean M. Grimmond
, Carsten O. Daub
, Yoshihide Hayashizaki, Geoffrey J. Faulkner
:
Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite. Bioinform. 25(19): 2613-2614 (2009) - 2008
- [j4]Nicolas Sierro, Yuko Makita, Michiel J. L. de Hoon
, Kenta Nakai:
DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic Acids Res. 36(Database-Issue): 93-96 (2008) - 2007
- [j3]Yuko Makita, Michiel J. L. de Hoon
, Antoine Danchin
:
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes. BMC Bioinform. 8 (2007) - 2005
- [j2]Michiel J. L. de Hoon, Yuko Makita, Kenta Nakai, Satoru Miyano
:
Prediction of Transcriptional Terminators in Bacillus subtilis and Related Species. PLoS Comput. Biol. 1(3) (2005) - [c6]Yuko Makita, Michiel J. L. de Hoon, Naotake Ogasawara, Satoru Miyano, Kenta Nakai:
Bayesian Joint Prediction of Associated Transcription Factors in Bacillus subtilis. Pacific Symposium on Biocomputing 2005 - [c5]Michiel J. L. de Hoon, Dennis Vitkup:
Comparative Systems Biology of the Sporulation Initiation Network in Prokaryotes. Systems Biology and Regulatory Genomics 2005: 62-69 - 2004
- [c4]Michiel J. L. de Hoon
, Yuko Makita
, Seiya Imoto, Kazuo Kobayashi, Naotake Ogasawara, Kenta Nakai, Satoru Miyano
:
Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data. ISMB/ECCB (Supplement of Bioinformatics) 2004: 101-108 - [c3]Michiel J. L. de Hoon, Seiya Imoto, Kazuo Kobayashi, Naotake Ogasawara, Satoru Miyano:
Predicting the Operon Structure of Bacillus subtilis Using Operon Length, Intergene Distance, and Gene Expression Information. Pacific Symposium on Biocomputing 2004: 276-287 - 2003
- [c2]Michiel J. L. de Hoon, Seiya Imoto, Kazuo Kobayashi, Naotake Ogasawara, Satoru Miyano:
Inferring Gene Regulatory Networks from Time-Ordered Gene Expression Data of Bacillus Subtilis Using Differential Equations. Pacific Symposium on Biocomputing 2003: 17-28 - 2002
- [j1]Michiel J. L. de Hoon
, Seiya Imoto, Satoru Miyano
:
Statistical analysis of a small set of time-ordered gene expression data using linear splines. Bioinform. 18(11): 1477-1485 (2002) - [c1]Michiel J. L. de Hoon
, Seiya Imoto, Satoru Miyano:
Inferring Gene Regulatory Networks from Time-Ordered Gene Expression Data Using Differential Equations. Discovery Science 2002: 267-274
Coauthor Index
![](https://dblp.org/img/cog.dark.24x24.png)
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-04-25 05:54 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint