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Michael R. Brent
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2020 – today
- 2023
- [j12]Dhoha Abid, Michael R. Brent
:
NetProphet 3: a machine learning framework for transcription factor network mapping and multi-omics integration. Bioinform. 39(2) (2023) - 2021
- [j11]Cynthia Z. Ma
, Michael R. Brent
:
Inferring TF activities and activity regulators from gene expression data with constraints from TF perturbation data. Bioinform. 37(9): 1234-1245 (2021)
2010 – 2019
- 2018
- [j10]Yiming Kang
, Hien-Haw Liow, Ezekiel J. Maier
, Michael R. Brent
:
NetProphet 2.0: mapping transcription factor networks by exploiting scalable data resources. Bioinform. 34(2): 249-257 (2018) - 2017
- [c17]Michael R. Brent:
Model-based Transcriptome Engineering. BCB 2017: 636 - 2011
- [c16]Sooraj KuttyKrishnan, Jeffrey Sabina, Laura Langton, Mark Johnston, Michael R. Brent:
A Quantitative Model of Glucose Signaling in Yeast Reveals an Incoherent Feed Forward Loop Leading to a Specific, Transient Pulse of Transcription. RECOMB 2011: 153
2000 – 2009
- 2009
- [j9]Brian C. Haynes, Michael R. Brent:
Benchmarking regulatory network reconstruction with GRENDEL. Bioinform. 25(6): 801-807 (2009) - [j8]David V. Lu, Randall H. Brown, Manimozhiyan Arumugam
, Michael R. Brent:
Pairagon: a highly accurate, HMM-based cDNA-to-genome aligner. Bioinform. 25(13): 1587-1593 (2009) - [c15]Minmin Chen, Yixin Chen, Michael R. Brent, Aaron E. Tenney:
Gradient-Based Feature Selection for Conditional Random Fields and its Applications in Computational Genetics. ICTAI 2009: 750-757 - [c14]Minmin Chen, Yixin Chen, Michael R. Brent, Aaron E. Tenney:
Constrained optimization for validation-guided conditional random field learning. KDD 2009: 189-198 - 2008
- [c13]Minmin Chen, Yixin Chen, Michael R. Brent:
CRF-OPT: An Efficient High-Quality Conditional Random Field Solver. AAAI 2008: 1018-1023 - 2007
- [j7]Evan Keibler, Manimozhiyan Arumugam
, Michael R. Brent:
The Treeterbi and Parallel Treeterbi algorithms: efficient, optimal decoding for ordinary, generalized and pair HMMs. Bioinform. 23(5): 545-554 (2007) - 2006
- [j6]Chaochun Wei
, Michael R. Brent:
Using ESTs to improve the accuracy of de novo gene prediction. BMC Bioinform. 7: 327 (2006) - [j5]Samuel S. Gross, Michael R. Brent:
Using Multiple Alignments to Improve Gene Prediction. J. Comput. Biol. 13(2): 379-393 (2006) - 2005
- [j4]Eduardo Eyras
, Alexandre Reymond
, Robert Castelo
, Jacqueline M. Bye, Francisco Camara
, Paul Flicek
, Elizabeth J. Huckle, Genis Parra
, David D. Shteynberg, Carine Wyss, Jane Rogers, Stylianos E. Antonarakis
, Ewan Birney
, Roderic Guigó, Michael R. Brent:
Gene finding in the chicken genome. BMC Bioinform. 6: 131 (2005) - [c12]Samuel S. Gross, Michael R. Brent:
Using Multiple Alignments to Improve Gene Prediction. RECOMB 2005: 374-388 - 2003
- [j3]Evan Keibler, Michael R. Brent:
Eval: A software package for analysis of genome annotations. BMC Bioinform. 4: 50 (2003) - 2002
- [c11]Matthew G. Snover, Michael R. Brent:
A Probabilistic Model for Learning Concatenative Morphology. NIPS 2002: 1513-1520 - [c10]Matthew G. Snover, Gaja Jarosz, Michael R. Brent:
Unsupervised Learning of Morphology Using a Novel Directed Search Algorithm: Taking the First Step. SIGMORPHON 2002: 11-20 - 2001
- [c9]Michael R. Brent, Xiaopeng Tao:
Chinese Text Segmentation With MBDP-1: Making the Most of Training Corpora. ACL 2001: 82-89 - [c8]Matthew G. Snover, Michael R. Brent:
A Bayesian Model for Morpheme and Paradigm Identification. ACL 2001: 482-490 - [c7]Ian Korf, Paul Flicek, Daniel Duan, Michael R. Brent:
Integrating genomic homology into gene structure prediction. ISMB (Supplement of Bioinformatics) 2001: 140-148
1990 – 1999
- 1999
- [j2]Michael R. Brent:
An Efficient, Probabilistically Sound Algorithm for Segmentation and Word Discovery. Mach. Learn. 34(1-3): 71-105 (1999) - [i2]Michael R. Brent:
An Efficient, Probabilistically Sound Algorithm for Segmentation and Word Discovery. CoRR cs.CL/9905007 (1999) - 1996
- [c6]Michael R. Brent, Timothy A. Cartwright:
Lexical categorization: fitting template grammars by incremental MDL optimization. ICGI 1996: 84-94 - 1994
- [c5]Timothy A. Cartwright, Michael R. Brent:
Segmenting Speech Without a Lexicon: The Roles of Phonotactics and Speech Source. SIGMORPHON 1994 - [i1]Timothy A. Cartwright, Michael R. Brent:
Segmenting speech without a lexicon: The roles of phonotactics and speech source. CoRR abs/cmp-lg/9412005 (1994) - 1993
- [j1]Michael R. Brent:
From Grammar to Lexicon: Unsupervised Learning of Lexical Syntax. Comput. Linguistics 19(2): 243-262 (1993) - 1991
- [c4]Michael R. Brent:
Automatic Acquisition of Subcategorization Frames from Untagged Text. ACL 1991: 209-214 - [c3]Michael R. Brent:
Automatic Semantic Classification Of Verbs From Their Syntactic Contexts: An Implemented Classifier For Stativity. EACL 1991: 222-226 - [c2]Michael R. Brent, Robert C. Berwick:
Automatic Acquisition of Subcategorization Frames from Tagged Text. HLT 1991 - 1990
- [c1]Michael R. Brent:
A Simplified Theory of Tense Representations and Constraints on their Composition. ACL 1990: 119-126
Coauthor Index
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