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2020 – today
- 2024
[j35]Marco Villani
, Elena Alboresi, Roberto Serra:
Models of Protocells Undergoing Asymmetrical Division. Entropy 26(4): 281 (2024)- [e3]Marco Villani, Stefano Cagnoni, Roberto Serra:
Artificial Life and Evolutionary Computation - 17th Italian Workshop, WIVACE 2023, Venice, Italy, September 6-8, 2023, Revised Selected Papers. Communications in Computer and Information Science 1977, Springer 2024, ISBN 978-3-031-57429-0 [contents] - 2023
- [j34]Marco Villani, Roberto Serra:
Super-Exponential Growth in Models of a Binary String World. Entropy 25(1): 168 (2023) - [c66]Marco Villani, Matteo Balugani, Roberto Serra:
The Properties of Pseudo-Attractors in Random Boolean Networks. WIVACE 2023: 67-74 - 2022
- [j33]Marco Villani, Gianluca D'Addese, Stuart A. Kauffman, Roberto Serra:
Attractor-Specific and Common Expression Values in Random Boolean Network Models (with a Preliminary Look at Single-Cell Data). Entropy 24(3): 311 (2022) - [c65]Federica Senatore, Roberto Serra, Marco Villani:
Modelling Wet-Dry Cycles in the Binary Polymer Model. WIVACE 2022: 119-129 - [c64]Federica Senatore, Marco Villani, Roberto Serra:
On the Growth of Chemical Diversity. WIVACE 2022: 130-140 - 2021
- [j32]Gianluca D'Addese, Laura Sani, Luca La Rocca, Roberto Serra, Marco Villani:
Asymptotic Information-Theoretic Detection of Dynamical Organization in Complex Systems. Entropy 23(4): 398 (2021) - [j31]Michele Braccini, Andrea Roli, Marco Villani, Roberto Serra:
Dynamical properties and path dependence in a gene-network model of cell differentiation. Soft Comput. 25(9): 6775-6787 (2021) - [c63]Giovanni Cappelletti, Gianluca D'Addese, Roberto Serra, Marco Villani:
Dynamical Criticality in Growing Networks. WIVACE 2021: 3-13 - 2020
- [j30]Gianluca D'Addese, Salvatore Magrì, Roberto Serra, Marco Villani:
Exploring the Dynamic Organization of Random and Evolved Boolean Networks. Algorithms 13(11): 272 (2020)
2010 – 2019
- 2019
- [c62]Roberto Serra:
On the interplay of self-replication and self-reproduction in protocells. ALIFE 2019: 10 - [c61]Michele Braccini, Andrea Roli, Marco Villani, Sara Montagna, Roberto Serra:
A simplified model of chromatin dynamics drives differentiation process in Boolean models of GRN. ALIFE 2019: 211-217 - [c60]Marco Villani, Salvatore Magrì, Andrea Roli, Roberto Serra:
Selecting for Positive Responses to Knock Outs in Boolean Networks. WIVACE 2019: 7-16 - [c59]Alberto Vezzani, Marco Villani, Roberto Serra:
Avalanches of Perturbations in Modular Gene Regulatory Networks. WIVACE 2019: 17-27 - [c58]Michele Braccini, Andrea Roli, Marco Villani, Sara Montagna, Roberto Serra:
The Effects of a Simplified Model of Chromatin Dynamics on Attractors Robustness in Random Boolean Networks with Self-loops: An Experimental Study. WIVACE 2019: 28-37 - 2018
- [j29]Marco Villani, Laura Sani, Riccardo Pecori, Michele Amoretti, Andrea Roli, Monica Mordonini, Roberto Serra, Stefano Cagnoni:
An Iterative Information-Theoretic Approach to the Detection of Structures in Complex Systems. Complex. 2018: 3687839:1-3687839:15 (2018) - [j28]Marco Villani, Luca La Rocca, Stuart A. Kauffman, Roberto Serra:
Dynamical Criticality in Gene Regulatory Networks. Complex. 2018: 5980636:1-5980636:14 (2018) - [j27]Andrea Roli, Marco Villani, Alessandro Filisetti, Roberto Serra:
Dynamical Criticality: Overview and Open Questions. J. Syst. Sci. Complex. 31(3): 647-663 (2018) - [c57]Laura Sani, Alberto Bononi, Riccardo Pecori, Michele Amoretti, Monica Mordonini, Andrea Roli, Marco Villani, Stefano Cagnoni, Roberto Serra:
An Improved Relevance Index Method to Search Important Structures in Complex Systems. WIVACE 2018: 3-16 - [c56]Salvatore Magrì, Marco Villani, Andrea Roli, Roberto Serra:
Evolving Critical Boolean Networks. WIVACE 2018: 17-29 - [e2]Marcello Pelillo, Irene Poli, Andrea Roli, Roberto Serra, Debora Slanzi, Marco Villani:
Artificial Life and Evolutionary Computation - 12th Italian Workshop, WIVACE 2017, Venice, Italy, September 19-21, 2017, Revised Selected Papers. Communications in Computer and Information Science 830, Springer 2018, ISBN 978-3-319-78657-5 [contents] - 2017
- [j26]Andrea Roli, Marco Villani, Riccardo Caprari, Roberto Serra:
Identifying Critical States through the Relevance Index. Entropy 19(2): 73 (2017) - [j25]Marco Villani, Davide Campioli, Chiara Damiani, Andrea Roli, Alessandro Filisetti, Roberto Serra:
Dynamical regimes in non-ergodic random Boolean networks. Nat. Comput. 16(2): 353-363 (2017) - [c55]Andrea Roli, Marco Villani, Roberto Serra:
Locating critical regions by the Relevance Index. ECAL 2017: 370-371 - [c54]Michele Braccini, Andrea Roli, Marco Villani, Roberto Serra:
A Comparison Between Threshold Ergodic Sets and Stochastic Simulation of Boolean Networks for Modelling Cell Differentiation. WIVACE 2017: 116-128 - [c53]Marco Villani, Laura Sani, Michele Amoretti, Emilio Vicari, Riccardo Pecori, Monica Mordonini, Stefano Cagnoni, Roberto Serra:
A Relevance Index Method to Infer Global Properties of Biological Networks. WIVACE 2017: 129-141 - [c52]Davide Sapienza, Marco Villani, Roberto Serra:
Dynamical Properties of a Gene-Protein Model. WIVACE 2017: 142-152 - [c51]Martina Musa, Marco Villani, Roberto Serra:
Simulating Populations of Protocells with Uneven Division. WIVACE 2017: 153-164 - 2016
- [c50]Laura Sani, Michele Amoretti, Emilio Vicari, Monica Mordonini, Riccardo Pecori, Andrea Roli, Marco Villani, Stefano Cagnoni, Roberto Serra:
Efficient Search of Relevant Structures in Complex Systems. AI*IA 2016: 35-48 - [c49]Emilio Vicari, Michele Amoretti, Laura Sani, Monica Mordonini, Riccardo Pecori, Andrea Roli, Marco Villani, Stefano Cagnoni, Roberto Serra:
GPU-Based Parallel Search of Relevant Variable Sets in Complex Systems. WIVACE 2016: 14-25 - [c48]Riccardo Righi, Andrea Roli, Margherita Russo, Roberto Serra, Marco Villani:
New Paths for the Application of DCI in Social Sciences: Theoretical Issues Regarding an Empirical Analysis. WIVACE 2016: 42-52 - [c47]Michele Braccini, Andrea Roli, Marco Villani, Roberto Serra:
Automatic Design of Boolean Networks for Cell Differentiation. WIVACE 2016: 91-102 - [c46]Giordano Calvanese, Marco Villani, Roberto Serra:
Synchronization in Near-Membrane Reaction Models of Protocells. WIVACE 2016: 167-178 - 2015
- [j24]Marco Villani, Andrea Roli, Alessandro Filisetti, Marco Fiorucci, Irene Poli, Roberto Serra:
The Search for Candidate Relevant Subsets of Variables in Complex Systems. Artif. Life 21(4): 412-431 (2015) - [c45]Andrea Roli, Marco Villani, Roberto Serra, Stefano Benedettini, Carlo Pinciroli, Mauro Birattari:
Dynamical Properties of Artificially Evolved Boolean Network Robots. AI*IA 2015: 45-57 - [c44]Alessandro Filisetti, Marco Villani, Andrea Roli, Marco Fiorucci, Roberto Serra:
Exploring the organisation of complex systems through the dynamical interactions among their relevant subsets. ECAL 2015: 286-293 - [c43]Marco Villani, Pietro Carra, Andrea Roli, Alessandro Filisetti, Roberto Serra:
On the Robustness of the Detection of Relevant Sets in Complex Dynamical Systems. WIVACE 2015: 15-28 - [c42]Marina L. Di Stefano, Marco Villani, Luca La Rocca, Stuart A. Kauffman, Roberto Serra:
Dynamically Critical Systems and Power-Law Distributions: Avalanches Revisited. WIVACE 2015: 29-39 - [c41]Marco Villani, Alessandro Filisetti, Matthieu Nadini, Roberto Serra:
On the Dynamics of Autocatalytic Cycles in Protocell Models. WIVACE 2015: 92-105 - [i3]Marco Villani, Andrea Roli, Alessandro Filisetti, Marco Fiorucci, Irene Poli, Roberto Serra:
The search for candidate relevant subsets of variables in complex systems. CoRR abs/1502.01734 (2015) - 2014
- [j23]Roberto Serra:
Complex Systems Models in Biology and Medicine: Generic Properties and Applications. Comput. Math. Methods Medicine 2014: 580509:1 (2014) - [j22]Roberto Serra, Alessandro Filisetti, Marco Villani, Alex Graudenzi, Chiara Damiani, Tommaso Panini:
A stochastic model of catalytic reaction networks in protocells. Nat. Comput. 13(3): 367-377 (2014) - [c40]Alessandro Filisetti, Marco Villani, Chiara Damiani, Alex Graudenzi, Andrea Roli, Wim Hordijk, Roberto Serra:
On RAF Sets and Autocatalytic Cycles in Random Reaction Networks. WIVACE 2014: 113-126 - [c39]Alessandro Filisetti, Marco Villani, Andrea Roli, Marco Fiorucci, Irene Poli, Roberto Serra:
On Some Properties of Information Theoretical Measures for the Study of Complex Systems. WIVACE 2014: 140-150 - [c38]Alex Graudenzi, Chiara Damiani, Andrea Paroni, Alessandro Filisetti, Marco Villani, Roberto Serra, Marco Antoniotti:
Investigating the Role of Network Topology and Dynamical Regimes on the Dynamics of a Cell Differentiation Model. WIVACE 2014: 151-168 - [c37]Roberto Serra:
The Complex Systems Approach to Protocells. WIVACE 2014: 201-211 - [p2]Marco Villani, Roberto Serra:
Attractors Perturbations in Biological Modelling: Avalanches and Cellular Differentiation. Evolution, Complexity and Artificial Life 2014: 59-76 - [p1]Stefano Benedettini, Andrea Roli, Roberto Serra, Marco Villani:
Automatic Design of Boolean Networks for Modelling Cell Differentiation. Evolution, Complexity and Artificial Life 2014: 77-89 - [i2]Roberto Serra, Alessandro Filisetti, Marco Villani, Alex Graudenzi, Chiara Damiani, Tommaso Panini:
A stochastic model of catalytic reaction networks in protocells. CoRR abs/1407.8508 (2014) - 2013
- [j21]Marco Villani, Roberto Serra:
On the dynamical properties of a model of cell differentiation. EURASIP J. Bioinform. Syst. Biol. 2013: 4 (2013) - [j20]Stefano Benedettini, Marco Villani, Andrea Roli, Roberto Serra, Mattia Manfroni, Antonio Gagliardi, Carlo Pinciroli, Mauro Birattari:
Dynamical regimes and learning properties of evolved Boolean networks. Neurocomputing 99: 111-123 (2013) - [c36]Andrea Roli, Marco Villani, Roberto Serra, Lorenzo Garattoni, Carlo Pinciroli, Mauro Birattari:
Identification of Dynamical Structures in Artificial Brains: An Analysis of Boolean Network Controlled Robots. AI*IA 2013: 324-335 - [c35]Marco Villani, Alessandro Filisetti, Stefano Benedettini, Andrea Roli, David Lane, Roberto Serra:
The detection of intermediate-level emergent structures and patterns. ECAL 2013: 372-378 - [c34]Alessandro Filisetti, Alex Graudenzi, Chiara Damiani, Marco Villani, Roberto Serra:
The role of backward reactions in a stochastic model of catalytic reaction networks. ECAL 2013: 793-801 - [c33]Marco Villani, Stefano Benedettini, Andrea Roli, David Lane, Irene Poli, Roberto Serra:
Identifying Emergent Dynamical Structures in Network Models. WIRN 2013: 3-13 - [c32]Chiara Damiani, Alessandro Filisetti, Alex Graudenzi, Marco Villani, Roberto Serra:
Recent developments in research on catalytic reaction networks. WIVACE 2013: 3-13 - [c31]Roberto Serra, Alessandro Filisetti, Alex Graudenzi, Chiara Damiani, Marco Villani:
A model of protocell based on the introduction of a semi-permeable membrane in a stochastic model of catalytic reaction networks. WIVACE 2013: 70-73 - 2012
- [j19]Alessandro Filisetti, Alex Graudenzi, Roberto Serra, Marco Villani, Rudolf M. Füchslin, Norman H. Packard, Stuart A. Kauffman, Irene Poli:
A stochastic model of autocatalytic reaction networks. Theory Biosci. 131(2): 85-93 (2012) - [c30]Marco Villani, Roberto Serra, Stefano Benedettini, Andrea Roli, David Lane:
Noise-Induced Emergent Hierarchies in a CA Model. ACRI 2012: 244-253 - 2011
- [j18]Alex Graudenzi, Roberto Serra, Marco Villani, Annamaria Colacci, Stuart A. Kauffman:
Robustness Analysis of a Boolean Model of Gene Regulatory Network with Memory. J. Comput. Biol. 18(4): 559-577 (2011) - [j17]Alex Graudenzi, Roberto Serra, Marco Villani, Chiara Damiani, Annamaria Colacci, Stuart A. Kauffman:
Dynamical Properties of a Boolean Model of Gene Regulatory Network with Memory. J. Comput. Biol. 18(10): 1291-1303 (2011) - [c29]Alessandro Filisetti, Alex Graudenzi, Roberto Serra, Marco Villani, Davide De Lucrezia, Irene Poli:
The role of energy in a stochastic model of the emergence of autocatalytic sets. ECAL 2011: 226-233 - [c28]Stefano Benedettini, Andrea Roli, Roberto Serra, Marco Villani:
Stochastic Local Search to Automatically Design Boolean Networks with Maximally Distant Attractors. EvoApplications (1) 2011: 22-31 - [c27]Luca Ansaloni, Marco Villani, Roberto Serra, David Lane:
Conditions for Long Lasting Sustainable Innovation in an Agent-based Model. ICAART (2) 2011: 410-417 - [c26]Davide Campioli, Marco Villani, Irene Poli, Roberto Serra:
Dynamical stability in random Boolean networks. WIRN 2011: 120-128 - [c25]Roberto Serra:
Dynamical models of genetic regulatory networks. WOA 2011: 7-10 - 2010
- [j16]Roberto Serra:
The Perfect Swarm: The Science of Complexity in Everyday Life by Len Fisher. J. Artif. Soc. Soc. Simul. 13(4) (2010) - [c24]Chiara Damiani, Stuart A. Kauffman, Roberto Serra, Marco Villani, Annamaria Colacci:
Information Transfer among Coupled Random Boolean Networks. ACRI 2010: 1-11 - [c23]Rudolf M. Füchslin, Alessandro Filisetti, Roberto Serra, Marco Villani, Davide De Lucrezia, Irene Poli:
Dynamical Stability of Autocatalytic Sets. ALIFE 2010: 65-72 - [c22]Andrea Roli, Stefano Benedettini, Roberto Serra, Marco Villani:
Analysis of attractor distances in Random Boolean Networks. WIRN 2010: 201-208 - [c21]A. Barbieri, Marco Villani, Roberto Serra, Stuart A. Kauffman, Annamaria Colacci:
Cell differentiation in noisy random Boolean network. WIRN 2010: 209-217 - [c20]Alessandro Filisetti, Roberto Serra, Marco Villani, Alex Graudenzi, Rudolf M. Füchslin, Irene Poli:
The influence of the residence time on the dynamics of catalytic reaction networks. WIRN 2010: 243-251 - [i1]Andrea Roli, Stefano Benedettini, Roberto Serra, Marco Villani:
Analysis of attractor distances in Random Boolean Networks. CoRR abs/1011.4682 (2010)
2000 – 2009
- 2009
- [c19]A. Barbieri, Marco Villani, Roberto Serra, Stuart A. Kauffman, Annamaria Colacci:
The influence of noise on the dynamics of Random Boolean Network. WIRN 2009: 11-18 - [e1]Roberto Serra, Rita Cucchiara:
AI*IA 2009: Emergent Perspectives in Artificial Intelligence, XIth International Conference of the Italian Association for Artificial Intelligence, Reggio Emilia, Italy, December 9-12, 2009, Proceedings. Lecture Notes in Computer Science 5883, Springer 2009, ISBN 978-3-642-10290-5 [contents] - 2008
- [j15]Roberto Serra, Marco Villani, Alex Graudenzi, Annamaria Colacci, Stuart A. Kauffman:
The simulation of gene knock-out in scale-free random Boolean models of genetic networks. Networks Heterog. Media 3(2): 333-343 (2008) - [c18]Roberto Serra, Marco Villani, Chiara Damiani, Alex Graudenzi, Annamaria Colacci:
The Diffusion of Perturbations in a Model of Coupled Random Boolean Networks. ACRI 2008: 315-322 - [c17]Roberto Serra, Marco Villani:
A CA Model of Spontaneous Formation of Concentration Gradients. ACRI 2008: 385-392 - [c16]Marco Villani, Roberto Serra, Luca Ansaloni, David Lane:
Global and Local Processes in a Model of Innovation. ACRI 2008: 401-408 - [c15]Roberto Serra, Alex Graudenzi, Marco Villani:
Genetic Regulatory Networks and Neural Networks. WIRN 2008: 109-117 - 2007
- [j14]Roberto Serra, Timoteo Carletti, Irene Poli:
Synchronization Phenomena in Surface-Reaction Models of Protocells. Artif. Life 13(2): 123-138 (2007) - 2006
- [j13]Massimo Andretta, Roberto Serra, Marco Villani:
A new model for polluted soil risk assessment. Comput. Geosci. 32(7): 890-896 (2006) - [j12]Stefania Bandini, Roberto Serra:
Complex Systems. Intelligenza Artificiale 3(1-2): 102-108 (2006) - [c14]Marco Villani, Roberto Serra, P. Ingrami, Stuart A. Kauffman:
Coupled Random Boolean Network Forming an Artificial Tissue. ACRI 2006: 548-556 - [c13]Roberto Serra, Marco Villani:
Agents, Equations and All That: On the Role of Agents in Understanding Complex Systems. Reasoning, Action and Interaction in AI Theories and Systems 2006: 159-175 - 2004
- [j11]Roberto Serra, Marco Villani, Luca Agostini:
A Small-world Network Where All Nodes Have the Same Connectivity, with Application to the Dynamics of Boolean Interacting Automata. Complex Syst. 15(2) (2004) - [c12]Alessandro Semeria, Marco Villani, Roberto Serra, Stuart A. Kauffman:
Perturbation in Genetic Regulatory Networks: Simulation and Experiments. ACRI 2004: 533-542 - 2003
- [c11]Roberto Serra, Marco Villani, Alessandro Semeria:
Robustness to Damage of Biological and Synthetic Networks. ECAL 2003: 706-715 - [c10]Roberto Serra, Marco Villani, Luca Agostini:
On the Dynamics of Scale-Free Boolean Networks. WIRN 2003: 43-49 - 2002
- [j10]Roberto Serra, Marco Villani, Annamaria Colacci:
Differential Equations and Cellular Automata Models of the Growth of Cell Cultures and Transformation Foci. Complex Syst. 13(4) (2002) - [j9]Roberto Serra, Marco Villani, Anna Salvemini:
Erratum to "Continuous genetic networks". Parallel Comput. 28(4): 667 (2002) - [c9]Roberto Serra, Marco Villani:
Perturbing the Regular Topology of Cellular Automata: Implications for the Dynamics. ACRI 2002: 168-177 - 2001
- [j8]Stefania Bandini, Giancarlo Mauri, Roberto Serra:
Cellular automata: From modeling to applications. Parallel Comput. 27(5): 537-538 (2001) - [j7]Stefania Bandini, Giancarlo Mauri, Roberto Serra:
Cellular automata: From a theoretical parallel computational model to its application to complex systems. Parallel Comput. 27(5): 539-553 (2001) - [j6]Roberto Serra, Marco Villani, Anna Salvemini:
Continuous genetic networks. Parallel Comput. 27(5): 663-683 (2001) - 2000
- [j5]Massimo Andretta, Antonio Eleuteri, F. Fortezza, D. Manco, L. Mingozzi, Roberto Serra, Roberto Tagliaferri:
Neural Networks for Sulphur Dioxide Ground Level Concentrations Forecasting. Neural Comput. Appl. 9(2): 93-100 (2000) - [c8]Roberto Serra, Marco Villani, Annamaria Colacci:
A Cellular Automata Model for the Simulation of In Vitro Carcinogenesis Tests. ACRI 2000: 135-143 - [c7]Marco Villani, Mariangela Mazzanti, Marco Padovani, Massimo Andretta, Roberto Serra, Salvatore Di Gregorio, Rocco Rongo, William Spataro:
A New Dynamical Model of Biodegradation. ACRI 2000: 161-169 - [c6]Francesco Vivarelli, Roberto Serra, Enzo Agagliati, Antonella Malcangi, Roberto Muraca:
Bayesian Neural Network for Fermentation Control. IJCNN (6) 2000: 279-284
1990 – 1999
- 1999
- [j4]Salvatore Di Gregorio, Roberto Serra:
An empirical method for modelling and simulating some complex macroscopic phenomena by cellular automata. Future Gener. Comput. Syst. 16(2-3): 259-271 (1999) - [j3]Salvatore Di Gregorio, Roberto Serra, Marco Villani:
Applying Cellular Automata to Complex Environmental Problems: The Simulation of the Bioremediation of Contaminated Soils. Theor. Comput. Sci. 217(1): 131-156 (1999) - [c5]Massimo Andretta, Mariangela Mazzanti, Roberto Serra, Marco Villani, Salvatore Di Gregorio, Rocco Rongo, William Spataro:
Cellular automata model for parallel simulation of contamination processes by oil in porous soils. PARCO 1999: 56-62 - 1997
- [j2]Salvatore Di Gregorio, Roberto Serra, Marco Villani:
A Cellular Automata Model of Soil Bioremediation. Complex Syst. 11(1) (1997) - [j1]Roberto Serra:
Book review: Analysis and applications of artificial neural networks by L.P.J. Veelenturf (Prentice Hall 1995). SIGART Bull. 8(1-4): 38-39 (1997) - 1996
- [c4]Salvatore Di Gregorio, Rocco Rongo, Roberto Serra, William Spataro, Marco Villani:
Simulation of Water Flow through a Porous Soil by Cellular Automaton Model. ACRI 1996: 79-88 - [c3]Salvatore Di Gregorio, Rocco Rongo, Roberto Serra, William Spataro, Giandomenico Spezzano, Domenico Talia, Marco Villani:
Parallel Simulation of Soil Contamination by Cellular Automata. Parcella 1996: 295-297
1980 – 1989
- 1989
- [c2]Mario Compiani, Daniele Montanari, Roberto Serra, Paolo Simonini:
Asymptotic Dynamics of Classifier Systems. ICGA 1989: 298-303 - [c1]Mario Compiani, Daniele Montanari, Roberto Serra, Paolo Simonini:
Dynamical Analysis of Classifier Systems. NATO Neurocomputing 1989: 103-107
Coauthor Index
[j35] [e3] [j34] [c66] [j33] [c65] [c64] [j32] [j31] [c63] [j30] [c61] [c60] [c59] [c58] [j29] [j28] [j27] [c57] [c56] [e2] [j26] [j25] [c55] [c54] [c53] [c52] [c51] [c50] [c49] [c48] [c47] [c46] [j24] [c45] [c44] [c43] [c42] [c41] [i3] [j22] [c40] [c39] [c38] [p2] [p1] [i2] [j21] [j20] [c36] [c35] [c34] [c33] [c32] [c31] [j19] [c30] [j18] [j17] [c29] [c28] [c27] [c26] [c24] [c23] [c22] [c21] [c20] [i1] [c19] [j15] [c18] [c17] [c16] [c15] [j13] [c14] [c13] [j11] [c12] [c11] [c10] [j10] [j9] [c9] [j6] [c8] [c7] [j3] [c5] [j2] [c4] [c3]
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