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ORCIDBibTeX records: Ming-Jing Hwang
@article{DBLP:journals/ploscb/ChiangWWH17,
author = {Austin W. T. Chiang and
Walt Y. L. Wu and
Ting Wang and
Ming{-}Jing Hwang},
title = {Identification of Entry Factors Involved in Hepatitis {C} Virus Infection
Based on Host-Mimicking Short Linear Motifs},
journal = {PLoS Comput. Biol.},
volume = {13},
number = {1},
year = {2017},
url = {https://doi.org/10.1371/journal.pcbi.1005368},
doi = {10.1371/JOURNAL.PCBI.1005368},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/ChiangWWH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChiangLCH14,
author = {Austin W. T. Chiang and
Wei{-}Chung Liu and
Pep Charusanti and
Ming{-}Jing Hwang},
title = {Understanding system dynamics of an adaptive enzyme network from globally
profiled kinetic parameters},
journal = {{BMC} Syst. Biol.},
volume = {8},
pages = {4},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-4},
doi = {10.1186/1752-0509-8-4},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ChiangLCH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/ChiangSH14,
author = {Austin W. T. Chiang and
Grace Shaw and
Ming{-}Jing Hwang},
editor = {Ignacio Rojas and
Francisco M. Ortu{\~{n}}o Guzman},
title = {Hkera, a human transcriptome partitioner},
booktitle = {International Work-Conference on Bioinformatics and Biomedical Engineering,
{IWBBIO} 2014, Granada, Spain, April 7-9, 2014},
pages = {1039},
publisher = {Copicentro Editorial},
year = {2014},
url = {http://iwbbio.ugr.es/2014/papers/IWBBIO\_2014\_paper\_107.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iwbbio/ChiangSH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChiangH13,
author = {Austin W. T. Chiang and
Ming{-}Jing Hwang},
title = {A computational pipeline for identifying kinetic motifs to aid in
the design and improvement of synthetic gene circuits},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-16}},
pages = {S5},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S16-S5},
doi = {10.1186/1471-2105-14-S16-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChiangH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/XieLHYH13,
author = {Zhong{-}Ru Xie and
Chuan{-}Kun Liu and
Fang{-}Chih Hsiao and
Adam Yao and
Ming{-}Jing Hwang},
title = {{LISE:} a server using ligand-interacting and site-enriched protein
triangles for prediction of ligand-binding sites},
journal = {Nucleic Acids Res.},
volume = {41},
number = {Webserver-Issue},
pages = {292--296},
year = {2013},
url = {https://doi.org/10.1093/nar/gkt300},
doi = {10.1093/NAR/GKT300},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/XieLHYH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XieH12,
author = {Zhong{-}Ru Xie and
Ming{-}Jing Hwang},
title = {Ligand-binding site prediction using ligand-interacting and binding
site-enriched protein triangles},
journal = {Bioinform.},
volume = {28},
number = {12},
pages = {1579--1585},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts182},
doi = {10.1093/BIOINFORMATICS/BTS182},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XieH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XieH10,
author = {Zhong{-}Ru Xie and
Ming{-}Jing Hwang},
title = {An interaction-motif-based scoring function for protein-ligand docking},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {298},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-298},
doi = {10.1186/1471-2105-11-298},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XieH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LinLH09,
author = {Wen{-}hsien Lin and
Wei{-}Chung Liu and
Ming{-}Jing Hwang},
title = {Topological and organizational properties of the products of house-keeping
and tissue-specific genes in protein-protein interaction networks},
journal = {{BMC} Syst. Biol.},
volume = {3},
pages = {32},
year = {2009},
url = {https://doi.org/10.1186/1752-0509-3-32},
doi = {10.1186/1752-0509-3-32},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/LinLH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuLDJYH07,
author = {Wei{-}Chung Liu and
Wen{-}hsien Lin and
Andrew J. Davis and
Ferenc Jord{\'{a}}n and
Hsih{-}te Yang and
Ming{-}Jing Hwang},
title = {A network perspective on the topological importance of enzymes and
their phylogenetic conservation},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-121},
doi = {10.1186/1471-2105-8-121},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuLDJYH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShihGH06,
author = {Edward S. C. Shih and
Ruei{-}chi R. Gan and
Ming{-}Jing Hwang},
title = {{OPAAS:} a web server for optimal, permuted, and other alternative
alignments of protein structures},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {95--98},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl264},
doi = {10.1093/NAR/GKL264},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ShihGH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChangWLHO06,
author = {Darby Tien{-}Hao Chang and
Yi{-}Zhong Weng and
Jung{-}Hsin Lin and
Ming{-}Jing Hwang and
Yen{-}Jen Oyang},
title = {Protemot: prediction of protein binding sites with automatically extracted
geometrical templates},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {303--309},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl344},
doi = {10.1093/NAR/GKL344},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChangWLHO06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/XieH06,
author = {Zhong{-}Ru Xie and
Ming{-}Jing Hwang},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A New Neural Network for B-Turn Prediction: the Effect of Site-Specific
Amino Acid Preference},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {237--246},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2006/215.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/XieH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangCH05,
author = {Shiou{-}Ling Wang and
Chung{-}Ming Chen and
Ming{-}Jing Hwang},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Classification of protein 3D folds by hidden Markov learning on sequences
of structural alphabets},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {65--72},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/161.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WangCH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiaoCHH04,
author = {Ben{-}Yang Liao and
Yu{-}Jung Chang and
Jan{-}Ming Ho and
Ming{-}Jing Hwang},
title = {The UniMarker {(UM)} method for synteny mapping of large genomes},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3156--3165},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth380},
doi = {10.1093/BIOINFORMATICS/BTH380},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiaoCHH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/LeeSHH04,
author = {In{-}Yee Lee and
Ta{-}tsen Soong and
Jan{-}Ming Ho and
Ming{-}Jing Hwang},
title = {Derivation and Analysis of Fragment Libraries of Protein Structures},
booktitle = {4th {IEEE} International Symposium on BioInformatics and BioEngineering
{(BIBE} 2004), 19-21 March 2004, Taichung, Taiwan},
pages = {516--521},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/BIBE.2004.1317386},
doi = {10.1109/BIBE.2004.1317386},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/LeeSHH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShihH03,
author = {Edward S. C. Shih and
Ming{-}Jing Hwang},
title = {Protein structure comparison by probability-based matching of secondary
structure elements},
journal = {Bioinform.},
volume = {19},
number = {6},
pages = {735--741},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg058},
doi = {10.1093/BIOINFORMATICS/BTG058},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShihH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/EwigBDHHLLMPSTYNH01,
author = {Carl S. Ewig and
Rajiv Berry and
Uri Dinur and
J{\"{o}}rg{-}R{\"{u}}diger Hill and
Ming{-}Jing Hwang and
Haiying Li and
Chris Liang and
Jon Maple and
Zhengwei Peng and
Thomas P. Stockfisch and
Thomas S. Thacher and
Lisa Yan and
Xiangshan Ni and
Arnold T. Hagler},
title = {Derivation of class {II} force fields. {VIII.} Derivation of a general
quantum mechanical force field for organic compounds},
journal = {J. Comput. Chem.},
volume = {22},
number = {15},
pages = {1782--1800},
year = {2001},
url = {https://doi.org/10.1002/jcc.1131},
doi = {10.1002/JCC.1131},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/EwigBDHHLLMPSTYNH01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/HwangCCC99,
author = {Ming{-}Jing Hwang and
Pei{-}Ying Chu and
Jye{-}Chan Chen and
Ito Chao},
title = {Conformational analysis of three pyrophosphate model species: Diphosphate,
methyl diphosphate, and triphosphate},
journal = {J. Comput. Chem.},
volume = {20},
number = {16},
pages = {1702--1715},
year = {1999},
url = {https://doi.org/10.1002/(SICI)1096-987X(199912)20:16\&\#60;1702::AID-JCC3\&\#62;3.0.CO;2-H},
doi = {10.1002/(SICI)1096-987X(199912)20:16\&\#60;1702::AID-JCC3\&\#62;3.0.CO;2-H},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/HwangCCC99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/MapleHJSH98,
author = {J. R. Maple and
Ming{-}Jing Hwang and
Karl James Jalkanen and
Thomas P. Stockfisch and
Arnold T. Hagler},
title = {Derivation of class {II} force fields: V. Quantum force field for
amides, peptides, and related compounds},
journal = {J. Comput. Chem.},
volume = {19},
number = {4},
pages = {430--458},
year = {1998},
url = {https://doi.org/10.1002/(SICI)1096-987X(199803)19:4\&\#60;430::AID-JCC5\&\#62;3.0.CO;2-T},
doi = {10.1002/(SICI)1096-987X(199803)19:4\&\#60;430::AID-JCC5\&\#62;3.0.CO;2-T},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/MapleHJSH98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/MapleHSDWEH94,
author = {J. R. Maple and
Ming{-}Jing Hwang and
Thomas P. Stockfisch and
Uri Dinur and
Marvin Waldman and
Carl S. Ewig and
Arnold T. Hagler},
title = {Derication of Class {II} Force Fields. I. Methology and Quantum Force
Field for the Alkyl Functional Group and Alkane Molecules},
journal = {J. Comput. Chem.},
volume = {15},
number = {2},
pages = {162--182},
year = {1994},
url = {https://doi.org/10.1002/jcc.540150207},
doi = {10.1002/JCC.540150207},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/MapleHSDWEH94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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