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ORCIDDhundy Bastola
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- affiliation: University of Nebraska Omaha, USA
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2020 – today
- 2022
[c44]Suganya Chandrababu, Dhundy R. Bastola:
Identification of Cross-feeding Metabolism Reveals Oral-Microbiome Modulated Host Behavior. BIBM 2022: 2816-2823- [c43]Caleb Pecka, Dhundy Bastola:
Investigating stagnant clinical outcomes after fecal microbiome transplant in autism spectrum disorder. BIBM 2022: 3287-3294 - 2021
- [c42]Suganya Chandrababu, Dhundy Bastola, Sheela Premaraj:
Statistical Prediction Models for Identifying the Microbial Diversity and Interactions Due to Fixed Periodontal Appliances. ICBRA 2021: 19-26 - 2020
- [c41]Margeret Hall
, Sharon Obasi, Dhundy Bastola:
Utilizing Oncology-Related Social Media Content to Model Information-Seeking Behaviors Towards a Model of Shared Decision Making. CBMS 2020: 257-260 - [c40]George Grispos, Kiran Bastola:
Cyber Autopsies: The Integration of Digital Forensics into Medical Contexts. CBMS 2020: 510-513 - [c39]Suganya Chandrababu, Dhundy Bastola:
A Novel Prediction Model for Discovering Beneficial Effects of Natural Compounds in Drug Repurposing. IWBBIO 2020: 811-824
2010 – 2019
- 2019
- [j14]Ling Zhang, Ishwor Thapa, Christian Haas, Dhundy Bastola:
Multiplatform biomarker identification using a data-driven approach enables single-sample classification. BMC Bioinform. 20(1): 601:1-601:13 (2019) - [j13]Suganya Chandrababu, Dhundy Bastola:
An Integrated Approach to Recognize Potential Protective Effects of Culinary Herbs Against Chronic Diseases. J. Heal. Informatics Res. 3(2): 184-199 (2019) - [c38]Suganya Chandrababu, Dhundy Bastola:
Integrated Network-Based Approach for the Treatment & Prevention of IBD with Natural Products. BIBE 2019: 827-831 - [c37]Suganya Chandrababu, Dhundy R. Bastola:
Multi-Stage Probabilistic Bipartite Graph Algorithm - Effect of Herbal Medicines on the Gut Ecosystem. BIBM 2019: 334-341 - [c36]Suganya Chandrababu, Dhundy Bastola:
Graph Model for the Identification of Multi-target Drug Information for Culinary Herbs. IWBBIO (1) 2019: 498-512 - 2018
- [j12]Ling Zhang, Magie Hall, Dhundy Bastola:
Utilizing Twitter data for analysis of chemotherapy. Int. J. Medical Informatics 120: 92-100 (2018) - [c35]Suganya Chandrababu, Dhundy R. Bastola:
Comparative Analysis of Graph and Relational Databases using HerbMicrobeDB. ICHI Workshops 2018: 19-28 - [c34]Almog Boanos, Suganya Chandrababu, Dhundy Bastola:
Automation of Personal Food Computers for Research in Drug Development and Biomedicine. IIAI-AAI 2018: 655-658 - 2017
- [j11]Oliver Bonham-Carter, Ishwor Thapa, Steven G. From, Dhundy Bastola:
A study of bias and increasing organismal complexity from their post-translational modifications and reaction site interplays. Briefings Bioinform. 18(1): 69-84 (2017) - [c33]Scott P. McGrath, Melanie L. McGrath, Dhundy Bastola:
Developing a concussion assessment mHealth app for certified Athletic Trainers. AMIA 2017 - [c32]Elham Rastegari, Vivien Marmelat, Lotfollah Najjar, Dhundy Bastola, Hesham H. Ali:
Using gait parameters to recognize various stages of Parkinson's disease. BIBM 2017: 1647-1651 - [c31]Suganya Chandrababu, Dhundy R. Bastola:
CuHerbDB- for pharmacogenomics and study of phytochemicals in culinary and medicinal herbs. BIBM 2017: 1787-1794 - [c30]Almog Boanos, Anitha Sri Mothukuri, Kaitlin A. Goettsch, Dhundy Kiran Bastola:
Investigation and utilization of personal food computers for research in drug development and biomedicine. BIBM 2017: 2229-2231 - 2016
- [j10]Jasjit K. Banwait, Kaitlin A. Goettsch, Dhundy R. Bastola:
Proteins localised to human mitochondria show structural element enrichment in their corresponding mRNA. Int. J. Comput. Biol. Drug Des. 9(1/2): 120-134 (2016) - [c29]Kathryn M. Cooper, Dhundy Bastola, Robin A. Gandhi, Dario Ghersi, Steven H. Hinrichs, Marsha Morien, Ann L. Fruhling:
Forecasting the Spread of Mosquito-Borne Disease using Publicly Accessible Data: A Case Study in Chikungunya. AMIA 2016 - [c28]Kritika Karri, Dhundy R. Bastola:
Immune based prognostic biomarkers for multiple anticancer therapies in lung adenocarcinoma. BIBM 2016: 1120-1127 - [c27]Oliver Bonham-Carter, Dhundy R. Bastola:
PTM Tracker: A system for determining trends of PTM modification sites relative to protein domains. EIT 2016: 482-487 - 2015
- [j9]W. Scott Campbell, Jay Pedersen, James C. McClay, Praveen Rao, Dhundy Bastola, James R. Campbell:
An alternative database approach for management of SNOMED CT and improved patient data queries. J. Biomed. Informatics 57: 350-357 (2015) - [c26]Jasjit K. Banwait, Schuyler P. Dougherty, Ishwor Thapa, Dhundy Kiran Bastola:
Guilt-by association approach to identify novel human aging-related genes using protein domains. BIBM 2015: 301-304 - [c25]Akshay Balasubramanya, Ishwor Thapa, Dhundy Bastola, Dario Ghersi:
A novel approach to identify shared fragments in drugs and natural products. BIBM 2015: 575-580 - [c24]Oliver Bonham-Carter, Dhundy R. Bastola:
A text mining application for linking functionally stressed-proteins to their post-translational modifications. BIBM 2015: 611-614 - [c23]Ishwor Thapa, Howard S. Fox, Dhundy R. Bastola:
Transcriptome analysis of HIV-1 virus in understanding the effect of antiretroviral drugs (cART) and methamphetamine on the virus. BIBM 2015: 962-968 - [c22]Kritika Karri, Dhundy R. Bastola:
A novel signature for identification of upstream alternative translation initiation sites. BIBM 2015: 1184-1191 - 2014
- [j8]Oliver Bonham-Carter, Joe Steele, Dhundy Bastola:
Alignment-free genetic sequence comparisons: a review of recent approaches by word analysis. Briefings Bioinform. 15(6): 890-905 (2014) - [j7]Oliver Bonham-Carter, Jay Pedersen, Dhundy Bastola:
A content and structural assessment of oxidative motifs across a diverse set of life forms. Comput. Biol. Medicine 53: 179-189 (2014) - [j6]Jasjit K. Banwait, Hesham H. Ali, Dhundy Bastola:
Optimisation of miRNA-mRNA relationship prediction using biological features. Int. J. Comput. Biol. Drug Des. 7(1): 45-60 (2014) - [c21]Scott McGrath, Dhundy Kiran Bastola:
DTC genetic testing and consumer comprehension. BCB 2014: 582-583 - [c20]Oliver Bonham-Carter, Ishwor Thapa, Dhundy Bastola:
Evidence of post translational modification bias extracted from the tRNA and corresponding amino acid interplay across a set of diverse organisms. BCB 2014: 774-781 - [c19]Jay Pedersen, Ryan Patch, Lotfollah Najjar, Dhundy Bastola:
PathwayLinks: Network analysis of metabolic pathways across bacterial organisms in a community. BIBM 2014: 14-21 - 2013
- [j5]Oliver Bonham-Carter, Hesham H. Ali, Dhundy Bastola:
A base composition analysis of natural patterns for the preprocessing of metagenome sequences. BMC Bioinform. 14(S-11): S5 (2013) - [c18]Oliver Bonham-Carter, Lotfollah Najjar, Dhundy Bastola:
Evidence of a Pathway of Reduction in Bacteria: Reduced Quantities of Restriction Sites Impact tRNA Activity in a Trial Set. BCB 2013: 926 - [c17]Oliver Bonham-Carter, Jay Pedersen, Lotfollah Najjar, Dhundy Bastola:
Modeling the Effects of Microgravity on Oxidation in Mitochondria: A Protein Damage Assessment across a Diverse Set of Life Forms. ICDM Workshops 2013: 250-257 - [c16]Kathryn Dempsey, Ishwor Thapa, Claudia Cortes, Zach Eriksen, Dhundy Bastola, Hesham H. Ali:
On Mining Biological Signals Using Correlation Networks. ICDM Workshops 2013: 327-334 - [c15]Scott McGrath, Kiran Bastola, Harvey P. Siy:
Concept to commit: A pattern designed to trace code changes from user requests to change implementation by analyzing mailing lists and code repositories. DAPSE@ICSE 2013: 6-8 - [c14]Oliver Bonham-Carter, Abhishek Parakh, Dhundy Bastola:
sEncrypt: An Encryption Algorithm Inspired from Biological Processes. TrustCom/ISPA/IUCC 2013: 321-327 - 2012
- [j4]Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali:
Functional identification in correlation networks using gene ontology edge annotation. Int. J. Comput. Biol. Drug Des. 5(3/4): 222-244 (2012) - [c13]Jasjit K. Banwait, Hesham H. Ali, Dhundy Bastola:
Enriching miRNA binding site specificity with sequence profile based filtering of 3'-UTR region of mRNA. BIBM Workshops 2012: 558-563 - [c12]Oliver Bonham-Carter, Hesham H. Ali, Dhundy Bastola:
A meta-genome sequencing and assembly preprocessing algorithm inspired by restriction site base composition. BIBM Workshops 2012: 696-703 - [c11]Ishwor Thapa, Sanjukta Bhowmick, Dhundy Bastola:
A comparison between hierarchical clustering and community detection method in the collection of gene targets for molecular identification of pathogenic fungi. BIBM Workshops 2012: 756-761 - [c10]Cherie Noteboom, Dhundy Bastola, Sajda Qureshi:
Cycles of Electronic Health Records Adaptation by Physicians: How Do the Positive and Negative Experiences with the EHR System Affect Physicians' EHR Adaptation Process? HICSS 2012: 2685-2695 - [c9]Dhundy Bastola, Scott McGrath, Sanjukta Bhowmick, Ishwor Thapa:
A Comparison of Computational Approaches in the Molecular Identification of Pathogenic Organisms. HISB 2012: 73 - [c8]M. Rahmani, Dhundy Bastola, Lotfollah Najjar:
Comparative Analysis of Software Repository Metrics in BioPerl, BioJava and BioRuby. ICCS 2012: 518-521 - 2011
- [c7]Kathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali:
Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search. BIBM Workshops 2011: 255-261 - [c6]Kathryn Dempsey, Stephen Bonasera, Dhundy Bastola, Hesham H. Ali:
A Novel Correlation Networks Approach for the Identification of Gene Targets. HICSS 2011: 1-8 - 2010
- [j3]Rajib Sengupta, Dhundy Bastola, Hesham H. Ali:
Classification and Identification of fungal Sequences Using Characteristic restriction endonuclease Cut Order. J. Bioinform. Comput. Biol. 8(2): 181-198 (2010)
2000 – 2009
- 2008
- [j2]Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali:
MTAP: The Motif Tool Assessment Platform. BMC Bioinform. 9(S-9) (2008) - [c5]Dhundy Bastola, Sarfraz H. Chandio, Peter Iwen, Steven H. Hinrichs, Hesham H. Ali:
RFLP-WAVE Analysis for Rapid Identification of Medically Important Fungi. HICSS 2008: 229 - [c4]Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali:
A parallel architecture for regulatory motif algorithm assessment. IPDPS 2008: 1-8 - 2007
- [c3]Khalid Sayood, Dhundy Bastola, Peter Iwen, Steven H. Hinrichs:
Use of Average Mutual Information based Species Signature for Fungal and Mycobacterial Differentiation. BIOCOMP 2007: 289-295 - 2006
- [j1]Xutao Deng, Huimin Geng, Dhundy Bastola, Hesham H. Ali:
Link test - A statistical method for finding prostate cancer biomarkers. Comput. Biol. Chem. 30(6): 425-433 (2006) - 2005
- [c2]Huimin Geng, Xutao Deng, Dhundy Bastola, Hesham H. Ali:
On Clustering Biological Data Using Unsupervised and Semi-Supervised Message Passing. BIBE 2005: 294-298 - 2004
- [c1]Huimin Geng, Dhundy Bastola, Hesham H. Ali:
A New Approach to Clustering Biological Data Using Message Passing. CSB 2004: 493-494
Coauthor Index
aka: Hesham H. Ali
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